DK960072 |
Clone id |
TST39A01NGRL0006_G15 |
Library |
TST39 |
Length |
687 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_G15. 5' end sequence. |
Accession |
DK960072 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3251Contig1 |
Sequence |
ACAGAAAACGCGCACCTACACTCACGCAACAGAGCTCTCTGCTACGAGAGATAGCTAGAG AGAGGGAGAGAGAGTCCTTGTATGTGTACTGTGCGTCGCGCCGCTCCGCTCTTCCCTCTC TCTGGTAATGGACAACCCAAATGATCCAGCAACTCGTTGGATCTCGTTCCTTGAGCACAA CCTTCTTGACATTGAACCTGCTCCCAACTCCGCAGAAGCCCCTTTCTGGAATGCCTGCAG TGAAAACGAGAACCTGAAGGCCGAATACAACGTCTTGAACCATGACAATAACACTAAGAA AAGGACAAGAGAAGAGTATTCTAGTGGAGCATGCAAAAGGGACGATTGCCCGAGTGGAGC GTGTGGAAAGGCATGTCGAGAGAAGCTGCGTAGGGACAGGCTAAACGACAGGTTCATGGA GTTGAGTGCGATTCTCGAGCCAGACAAGCCGCCAAAGATGGATAAAGCTTCAATCCTCCG TGATGCAGCTAGGATCTTGGGACAGTTACGGGTCGAAGCTCAGCAGCTGAAAGATGCTAA TCATCAACTTCACGAAACCATCCGAGAGTTGAAGGCAGAAAAGAATGAGCTACGTGATGA GAAGACAACGTTGAAATGCGAGAAGGAGAGACTAGAGAAACAGTTGAAAAGTGTAAGTGT ACTTCCGGCCGGCGGCTATGTGGGGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FH37 |
Definition |
sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana |
Align length |
113 |
Score (bit) |
137.0 |
E-value |
4.0e-32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRC9 |
Definition |
tr|A9NRC9|A9NRC9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
175 |
Score (bit) |
160.0 |
E-value |
7.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960072|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_G15, 5' (687 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NRC9|A9NRC9_PICSI Putative uncharacterized protein OS=Picea... 160 7e-38 tr|A9TJS4|A9TJS4_PHYPA Predicted protein OS=Physcomitrella paten... 158 3e-37 tr|A9RJX7|A9RJX7_PHYPA Predicted protein OS=Physcomitrella paten... 153 1e-35 tr|Q6ZGM4|Q6ZGM4_ORYSJ BHLH transcription factor OS=Oryza sativa... 150 6e-35 tr|A2X043|A2X043_ORYSI Putative uncharacterized protein OS=Oryza... 150 6e-35 tr|A7P102|A7P102_VITVI Chromosome chr19 scaffold_4, whole genome... 145 2e-33 tr|A9TH67|A9TH67_PHYPA Predicted protein (Fragment) OS=Physcomit... 143 1e-32 tr|B4FUY2|B4FUY2_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 142 2e-32 tr|B6SST8|B6SST8_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 142 2e-32 tr|Q7XXQ5|Q7XXQ5_ORYSJ BHLH transcription factor OS=Oryza sativa... 141 4e-32 tr|B8B796|B8B796_ORYSI Putative uncharacterized protein OS=Oryza... 141 4e-32 tr|A3BKT7|A3BKT7_ORYSJ Putative uncharacterized protein OS=Oryza... 140 6e-32 tr|B7FHK4|B7FHK4_MEDTR Putative uncharacterized protein OS=Medic... 140 8e-32 tr|B7FHX6|B7FHX6_MEDTR Putative uncharacterized protein OS=Medic... 139 2e-31 tr|B6T879|B6T879_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 139 2e-31 tr|B4FGY4|B4FGY4_MAIZE Putative uncharacterized protein OS=Zea m... 139 2e-31 tr|B5AYF5|B5AYF5_TOBAC Basic helix-loop-helix protein OS=Nicotia... 137 8e-31 tr|A3BPH0|A3BPH0_ORYSJ Putative uncharacterized protein OS=Oryza... 136 1e-30 tr|B6TNC2|B6TNC2_MAIZE BHLH transcription factor OS=Zea mays PE=... 135 3e-30 tr|B4FRK4|B4FRK4_MAIZE Putative uncharacterized protein OS=Zea m... 135 3e-30 tr|Q6ZKI8|Q6ZKI8_ORYSJ Os08g0138500 protein OS=Oryza sativa subs... 134 4e-30 tr|A2YR23|A2YR23_ORYSI Putative uncharacterized protein OS=Oryza... 134 4e-30 tr|A9PJ95|A9PJ95_POPJC Putative uncharacterized protein OS=Popul... 134 7e-30 tr|Q84PA6|Q84PA6_ORYSJ Helix-loop-helix-like protein (Fragment) ... 130 6e-29 tr|B6UCV4|B6UCV4_MAIZE BHLH transcription factor OS=Zea mays PE=... 129 2e-28 tr|B6TTJ8|B6TTJ8_MAIZE BHLH transcription factor OS=Zea mays PE=... 125 3e-27 tr|B4G0P0|B4G0P0_MAIZE Putative uncharacterized protein OS=Zea m... 121 4e-26 tr|B8A1W1|B8A1W1_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|A5C2F6|A5C2F6_VITVI Putative uncharacterized protein OS=Vitis... 112 3e-23 tr|A3B4Q1|A3B4Q1_ORYSJ Putative uncharacterized protein OS=Oryza... 111 5e-23
>tr|A9NRC9|A9NRC9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 238
Score = 160 bits (405), Expect = 7e-38 Identities = 85/175 (48%), Positives = 116/175 (66%) Frame = +2
Query: 149 ATRWISFLEHNLLDIEPAPNSAEAPFWNACSENENLKAEYNVLNHDNNTKKRTREEYSSG 328 + +W+S+ + LLD A FW N+ +V +N +E+ Sbjct: 6 SNKWLSYFDEPLLDEVGVGQPANPFFWCGPGINDQPDVSGSVEIDGSNKDIDEQEKLCPR 65
Query: 329 ACKRDDCPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASILRDAARILGQL 508 R++ G KACREK+RRDRLNDRFMELS++LEP +PPK DKA+IL DAAR++ QL Sbjct: 66 KRPREESSGGPGSKACREKMRRDRLNDRFMELSSVLEPGRPPKTDKATILSDAARVMSQL 125
Query: 509 RVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVSVLPAG 673 R +AQ+LK++N L ETI++LKAEKNELRDEK LK EKERLE+Q+K+++ LP+G Sbjct: 126 RADAQKLKESNDHLQETIKDLKAEKNELRDEKLRLKAEKERLEQQVKAMT-LPSG 179
>tr|A9TJS4|A9TJS4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_195760 PE=4 SV=1 Length = 238
Score = 158 bits (400), Expect = 3e-37 Identities = 88/183 (48%), Positives = 127/183 (69%) Frame = +2
Query: 125 VMDNPNDPATRWISFLEHNLLDIEPAPNSAEAPFWNACSENENLKAEYNVLNHDNNTKKR 304 +M +P++ ++W+S+L NLL E S PF+ ++ + + ++ N + + Sbjct: 1 MMSSPSN-TSKWMSYLAENLLAEEEVQPSN--PFFWCTTQQPVEQIDCSIDNECSKGESD 57
Query: 305 TREEYSSGACKRDDCPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASILRD 484 E+ S R++ SG+ KACREK+RRDRLNDRF++LSA LEP +PPK DKA+IL D Sbjct: 58 VPEKSCSRKRSREEGSSGSGNKACREKMRRDRLNDRFLDLSAALEPGRPPKTDKATILSD 117
Query: 485 AARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVSVL 664 A RIL QLR EAQ L ++N+QL ETI++LK EKNELR+EKT LK +KERLE+Q+K++++ Sbjct: 118 AVRILTQLRAEAQGLTESNNQLRETIKDLKNEKNELREEKTRLKADKERLEQQVKAMTI- 176
Query: 665 PAG 673 PAG Sbjct: 177 PAG 179
>tr|A9RJX7|A9RJX7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_67124 PE=4 SV=1 Length = 201
Score = 153 bits (386), Expect = 1e-35 Identities = 86/144 (59%), Positives = 109/144 (75%) Frame = +2
Query: 242 ENENLKAEYNVLNHDNNTKKRTREEYSSGACKRDDCPSGACGKACREKLRRDRLNDRFME 421 +NE K + +VL + ++KR+RE+ AC SGA KACREK+RRDRLNDRF+E Sbjct: 11 DNECSKGDSDVLEK-SCSRKRSRED----AC------SGAGNKACREKMRRDRLNDRFLE 59
Query: 422 LSAILEPDKPPKMDKASILRDAARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDE 601 LSA LEP +PPK DKA+IL DA RIL QLR EAQ L ++N+QL ETI++LK EKNELR+E Sbjct: 60 LSAALEPGRPPKTDKATILSDAVRILTQLRAEAQGLTESNNQLRETIKDLKNEKNELREE 119
Query: 602 KTTLKCEKERLEKQLKSVSVLPAG 673 KT LK +KERLE+Q+KS+S+ P G Sbjct: 120 KTRLKADKERLEQQVKSISI-PTG 142
>tr|Q6ZGM4|Q6ZGM4_ORYSJ BHLH transcription factor OS=Oryza sativa subsp. japonica GN=OJ1442_E05.19 PE=2 SV=1 Length = 236
Score = 150 bits (380), Expect = 6e-35 Identities = 77/125 (61%), Positives = 98/125 (78%) Frame = +2
Query: 299 KRTREEYSSGACKRDDCPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASIL 478 KR R+E SS SG KACREK+RRDRLNDRF+ELS+++ PDK K+DKA+IL Sbjct: 57 KRGRDESSS---------SGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANIL 107
Query: 479 RDAARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVS 658 DAAR+L +LR EA++LK++N +L ETI++LK EKNELRDEK TLK EKERLE+Q+K++S Sbjct: 108 SDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALS 167
Query: 659 VLPAG 673 V P G Sbjct: 168 VAPTG 172
>tr|A2X043|A2X043_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05583 PE=4 SV=1 Length = 236
Score = 150 bits (380), Expect = 6e-35 Identities = 77/125 (61%), Positives = 98/125 (78%) Frame = +2
Query: 299 KRTREEYSSGACKRDDCPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASIL 478 KR R+E SS SG KACREK+RRDRLNDRF+ELS+++ PDK K+DKA+IL Sbjct: 57 KRGRDESSS---------SGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANIL 107
Query: 479 RDAARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVS 658 DAAR+L +LR EA++LK++N +L ETI++LK EKNELRDEK TLK EKERLE+Q+K++S Sbjct: 108 SDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALS 167
Query: 659 VLPAG 673 V P G Sbjct: 168 VAPTG 172
>tr|A7P102|A7P102_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027432001 PE=4 SV=1 Length = 237
Score = 145 bits (366), Expect = 2e-33 Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 14/188 (7%) Frame = +2
Query: 149 ATRWISFLEHNLLDIEPAPNSAEAPF-----WN---ACSENENLKAEYNVLNHDNN---- 292 AT W+ E+ L++ P P+S A W A + + N+ E + D++ Sbjct: 6 ATNWL--YEYGLIEDIPVPDSNFANTNSGFAWTPVQALNTSANVSGEIDGSFGDSDGIKE 63
Query: 293 --TKKRTREEYSSGACKRDDCPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDK 466 +KKR R E S GA + KACREKLRRDRLND+FMEL +ILEP +PPK DK Sbjct: 64 TGSKKRVRSE-SCGA---------SSSKACREKLRRDRLNDKFMELGSILEPGRPPKTDK 113
Query: 467 ASILRDAARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQL 646 +SIL DA R++ QLR E+Q+LKD+N L E I+ELKAEKNELRDEK LK EKE+LE+QL Sbjct: 114 SSILIDAVRMVTQLRGESQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQL 173
Query: 647 KSVSVLPA 670 K+++ P+ Sbjct: 174 KAMNAQPS 181
>tr|A9TH67|A9TH67_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_145569 PE=4 SV=1 Length = 172
Score = 143 bits (360), Expect = 1e-32 Identities = 70/108 (64%), Positives = 89/108 (82%) Frame = +2
Query: 338 RDDCPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASILRDAARILGQLRVE 517 R++ GA KACREK+RRDRLNDRF+EL AILEP +PPK DKA+IL DA RIL QLR E Sbjct: 3 REEISGGAGNKACREKMRRDRLNDRFLELGAILEPGRPPKTDKATILSDAVRILTQLRAE 62
Query: 518 AQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVSV 661 AQ L ++N+QL ETI++LK EKNELR+EK+ LK +KERLE Q+K++++ Sbjct: 63 AQGLTESNNQLRETIKDLKNEKNELREEKSRLKADKERLELQVKAMTI 110
>tr|B4FUY2|B4FUY2_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 Length = 235
Score = 142 bits (359), Expect = 2e-32 Identities = 71/122 (58%), Positives = 96/122 (78%), Gaps = 1/122 (0%) Frame = +2
Query: 311 EEYSSGACKRDD-CPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASILRDA 487 E+ + G RD+ C SG KACREK+RRD+LNDRF+ELS+I+ P K K+DKA+IL DA Sbjct: 50 EQSNLGKRGRDEPCSSGPTSKACREKMRRDKLNDRFLELSSIMNPGKEAKLDKANILSDA 109
Query: 488 ARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVSVLP 667 AR++ QLR EA++LK++N +L E I++LK EKNELR+EK LK EK+RLE+Q+K++SV P Sbjct: 110 ARMVAQLRGEAEKLKESNEKLRENIKDLKEEKNELREEKVRLKVEKDRLEQQVKAMSVAP 169
Query: 668 AG 673 G Sbjct: 170 TG 171
>tr|B6SST8|B6SST8_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 Length = 231
Score = 142 bits (358), Expect = 2e-32 Identities = 70/122 (57%), Positives = 96/122 (78%), Gaps = 1/122 (0%) Frame = +2
Query: 311 EEYSSGACKRDD-CPSGACGKACREKLRRDRLNDRFMELSAILEPDKPPKMDKASILRDA 487 E+ + G RD+ C SG KACREK+RRD+LNDRF+ELS+++ P K K+DKA+IL DA Sbjct: 46 EQSNLGKRSRDEPCSSGLKSKACREKMRRDKLNDRFLELSSVMNPGKQAKLDKANILSDA 105
Query: 488 ARILGQLRVEAQQLKDANHQLHETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVSVLP 667 AR++ QLR EA++LK++N +L E I++LK EKNELR+EK LK EK+RLE+Q+K++SV P Sbjct: 106 ARMVAQLRGEAEKLKESNEKLRENIKDLKEEKNELREEKVRLKVEKDRLEQQVKAMSVAP 165
Query: 668 AG 673 G Sbjct: 166 TG 167
>tr|Q7XXQ5|Q7XXQ5_ORYSJ BHLH transcription factor OS=Oryza sativa subsp. japonica GN=Os07g0543000 PE=2 SV=1 Length = 256
Score = 141 bits (355), Expect = 4e-32 Identities = 81/160 (50%), Positives = 107/160 (66%), Gaps = 1/160 (0%) Frame = +2
Query: 194 EPAPNSAEAPFWNACSE-NENLKAEYNVLNHDNNTKKRTREEYSSGACKRDDCPSGACGK 370 +P + AP NAC+E N ++ E+ + T KR R E + PS K Sbjct: 53 QPVAPATAAP--NACAEINGSVDCEHG---KEQPTNKRPRSESGTR-------PSS---K 97
Query: 371 ACREKLRRDRLNDRFMELSAILEPDKPPKMDKASILRDAARILGQLRVEAQQLKDANHQL 550 ACREK+RRD+LN+RF+EL A+LEP K PKMDK+SIL DA R++ +LR EAQ+LK++N L Sbjct: 98 ACREKVRRDKLNERFLELGAVLEPGKTPKMDKSSILNDAIRVMAELRSEAQKLKESNESL 157
Query: 551 HETIRELKAEKNELRDEKTTLKCEKERLEKQLKSVSVLPA 670 E I+ELKAEKNELRDEK LK EKE LE+Q+K ++ P+ Sbjct: 158 QEKIKELKAEKNELRDEKQKLKAEKESLEQQIKFLNARPS 197
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