DK960075 [AcEST]

DK960075
Clone id	TST39A01NGRL0006_G18
Library	TST39
Length	154
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_G18. 5' end sequence.
Accession	DK960075
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1129Contig1
Sequence	GGGCTGTAGCATCGGAGTCTGCTTGCAGGCTACCAAAAAGCTTTTGGACAAAAATGAGGA ATTTGAGACTGTGTGTCTTGTCAAAAATCCCGAGAAGGCAGCTCGGGCCATCGGTGAAGA CTCATGAAAAGTAAAGTTCATAAATGGGGACATT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960075\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_G18, 5' (154 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A9SBX4
Definition	tr\|A9SBX4\|A9SBX4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length	51
Score (bit)	50.8
E-value	3.0e-05
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960075\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_G18, 5' (154 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A9SBX4\|A9SBX4_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05 tr\|A9RLH2\|A9RLH2_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.015 >tr\|A9SBX4\|A9SBX4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164024 PE=4 SV=1 Length = 368 Score = 50.8 bits (120), Expect = 3e-05 Identities = 24/51 (47%), Positives = 34/51 (66%) Frame = +2 Query: 2 GCSIGVCLQATKKLLDKNEEFETVCLVKNPEKAARAIGEDSKVKFINGDI 154 GCS GV + TK LL ++FE LV+N E+AA+AIG + +V F+ GD+ Sbjct: 119 GCSSGVGFEVTKTLLTAGDKFEVFGLVRNKERAAKAIGYGASRVTFVQGDV 169 >tr\|A9RLH2\|A9RLH2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_67716 PE=4 SV=1 Length = 380 Score = 42.0 bits (97), Expect = 0.015 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +2 Query: 2 GCSIGVCLQATKKLLDKNEEFETVCLVKNPEKAARAIGEDSKVKFINGDI 154 GCS GV L+ K LL + + + LV+N +AA+A+ S +V FI+G++ Sbjct: 143 GCSSGVGLEVVKTLLTEGDRLQVFGLVRNQRRAAKALDYGSSRVHFIHGNV 193