BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960077|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_G21, 5'
         (606 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5XJP1|TSSC1_DANRE Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2...    33   1.1  
sp|Q5HZM6|ELP3_XENLA Elongator complex protein 3 OS=Xenopus laev...    32   3.3  
sp|A5GZW8|DHSD_PIG Succinate dehydrogenase [ubiquinone] cytochro...    30   7.4  

>sp|Q5XJP1|TSSC1_DANRE Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2
           SV=1
          Length = 387

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 371 WTVKHVESVELCLQEHAHSLFNAWAYHHNFRQVLIISYLPKHVI 240
           W V+H+     CL+EH+H +++   Y+H+  Q+L+ +     VI
Sbjct: 256 WDVRHISEPVKCLEEHSHWVWSV-RYNHSHDQLLLTASSDSRVI 298


>sp|Q5HZM6|ELP3_XENLA Elongator complex protein 3 OS=Xenopus laevis
           GN=elp3 PE=2 SV=1
          Length = 549

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +2

Query: 14  PERSSKIHLIQLLCVLCTMLSYSIIIHRNVWIIVVRCSIKGRVSKGVFRGKHGRR*ADFK 193
           P+   K HL  +LC  CT L   +   ++V+  V R + +G   K V    H  + A FK
Sbjct: 226 PDYCLKRHLSDMLCYGCTRLEIGV---QSVYEDVARDTNRGHTVKAVCESFHLSKDAGFK 282

Query: 194 VTS 202
           V S
Sbjct: 283 VVS 285


>sp|A5GZW8|DHSD_PIG Succinate dehydrogenase [ubiquinone] cytochrome
           b small subunit, mitochondrial OS=Sus scrofa GN=SDHD
           PE=1 SV=2
          Length = 159

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 276 SAHHQLSAKACHLHDQPHRATI*CILVTLKSAYLRPC 166
           S  HQ S+KA  LH    R     +L  L +AYL PC
Sbjct: 52  SPSHQASSKAASLHWTGERVVSVLLLGLLPAAYLNPC 88

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960077|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_G21, 5'
         (606 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0WYX2|B0WYX2_CULQU Putative uncharacterized protein OS=Culex...    35   4.4  
tr|A9XBI6|A9XBI6_CLALS Histidine kinase receptor HK1 OS=Clavispo...    34   7.5  
tr|B4LG63|B4LG63_DROVI GJ13203 OS=Drosophila virilis GN=GJ13203 ...    34   7.6  
tr|A7RK90|A7RK90_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   9.9  

>tr|B0WYX2|B0WYX2_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ012482 PE=4 SV=1
          Length = 673

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -2

Query: 356 VESVELCLQEHAHSLFNAWAYHHNFRQVLIISYLPKHVI--CTTNP 225
           + S  L   E AH  + +W Y HN   VL+I+YL +H I  C  NP
Sbjct: 136 LRSYLLSRDEVAHLFYQSW-YMHNMLNVLVINYLDRHRIELCVFNP 180


>tr|A9XBI6|A9XBI6_CLALS Histidine kinase receptor HK1 OS=Clavispora
           lusitaniae PE=4 SV=1
          Length = 2396

 Score = 33.9 bits (76), Expect = 7.5
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 325 CSWRQSSTDSTCFTVHRCKSGLHDSTMQSKSENLHVFKME 444
           CS R+SS  S   +VH  +SG H S+  ++ E LHV  ++
Sbjct: 46  CSTRRSSGLSHTGSVHSVRSGSHQSSNSARKEGLHVLSVD 85


>tr|B4LG63|B4LG63_DROVI GJ13203 OS=Drosophila virilis GN=GJ13203
           PE=4 SV=1
          Length = 878

 Score = 33.9 bits (76), Expect = 7.6
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 264 DDEHLSKVMMVGPSVKKRMSMLLEAKLNRFYVLYSPPMQKWLARLNDAKQEREFACL 434
           +DE   +V  VG +  K ++   E KL  F  +Y  PM+K L  L+  K+ R + C+
Sbjct: 243 EDEEDDEVTTVGKAEIKNIATGFECKLCDFASVYPNPMKKHLKELHGQKRPRIYNCM 299


>tr|A7RK90|A7RK90_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g84136 PE=4 SV=1
          Length = 168

 Score = 33.5 bits (75), Expect = 9.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 413 LLCIVESCKPLLHRWTVKHVESVEL--CLQEHAHSLFNAWAYHHNFRQVLIISYL 255
           L C V    P+    T+  +ES+    C QE    LFN +A HHN  ++ + SYL
Sbjct: 1   LKCAVNDNLPI--NMTIAALESLRRMPCRQETTEQLFNIYASHHNDVEIRVASYL 53