| DK960110 |
| Clone id |
TST39A01NGRL0006_I09 |
| Library |
TST39 |
| Length |
550 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_I09. 5' end sequence. |
| Accession |
DK960110 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL126Contig1 |
| Sequence |
CTACAAGTGCAAAGCAGCTGCTAAGGAAGGACTCGCAGATTCTCCCGTTCCAAGCCTTCA
AGCCAGACCAGATCCAGCACAGGAAAATCTGTAATTTCAAATGGCTGACGGAGAGGAAGT
TCAACCACTTGTGTGCGACAATGGATCTGGGATGGTCAAGGCTGGTTTCGCTGGCGATGA
TGCACCTCGGGCTGTATTTCCGAGTATAGTGGGTCGTCCTCGGCATACTGGTGTCATGGT
GGGGATGGGTCAGAAAGATGCTTATGTTGGTGATGAGGCTCAGTCTAAGCGAGGAATATT
GACCTTGAAGTATCCTATTGAGCATGGTATCGTCACCAACTGGGATGACATGGAGAAAAT
CTGGCACCATACCTTCTATAATGAGCTGCGTGTTGCCCCGGAAGAACACCCAGTACTGCT
TACTGAAGCTCCACTCAATCCAAAGGCAAACAGAGAACAGATGACCCANATCATGTTTGA
TACATTCAATGCACCAGCAATGTATGTTGCAATTCAAGCAGTGCTATCTTTATATGCTAG
TGGAAGGACG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O81221 |
| Definition |
sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum |
| Align length |
150 |
| Score (bit) |
300.0 |
| E-value |
2.0e-81 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TYG3 |
| Definition |
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
150 |
| Score (bit) |
303.0 |
| E-value |
3.0e-81 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960110|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_I09, 5'
(526 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella paten... 303 3e-81
tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 303 5e-81
tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 ... 302 8e-81
tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella paten... 302 8e-81
tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella paten... 302 8e-81
tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea m... 300 2e-80
tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid... 300 3e-80
tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=... 300 3e-80
tr|B8AWW7|B8AWW7_ORYSI Putative uncharacterized protein OS=Oryza... 300 3e-80
tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza... 300 3e-80
tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert seque... 300 3e-80
tr|A3AZ49|A3AZ49_ORYSJ Putative uncharacterized protein OS=Oryza... 300 3e-80
tr|A8W4W6|A8W4W6_9FABA Actin OS=Glycyrrhiza uralensis PE=2 SV=1 300 4e-80
tr|A5BXV1|A5BXV1_VITVI Chromosome chr13 scaffold_17, whole genom... 300 4e-80
tr|Q9FUS4|Q9FUS4_SETIT Actin OS=Setaria italica PE=2 SV=1 299 5e-80
tr|Q94G12|Q94G12_MUSPR Actin OS=Musa ABB Group GN=ACT1 PE=3 SV=1 299 5e-80
tr|Q94DL4|Q94DL4_ORYSJ cDNA, clone: J100088I07, full insert sequ... 299 5e-80
tr|Q947D0|Q947D0_TRIMO Actin (Fragment) OS=Triticum monococcum G... 299 5e-80
tr|Q8H1L9|Q8H1L9_HORVU Actin OS=Hordeum vulgare PE=2 SV=1 299 5e-80
tr|Q7XZK0|Q7XZK0_GOSHI Actin OS=Gossypium hirsutum GN=ACT2 PE=2 ... 299 5e-80
tr|Q7XZJ9|Q7XZJ9_GOSHI Actin OS=Gossypium hirsutum GN=ACT3 PE=2 ... 299 5e-80
tr|Q7XZJ3|Q7XZJ3_GOSHI Actin OS=Gossypium hirsutum GN=ACT10 PE=2... 299 5e-80
tr|Q7XZJ1|Q7XZJ1_GOSHI Actin OS=Gossypium hirsutum GN=ACT14 PE=2... 299 5e-80
tr|Q6PZE5|Q6PZE5_BRANA Actin (Fragment) OS=Brassica napus var. n... 299 5e-80
tr|Q6F4H4|Q6F4H4_TOBAC Actin OS=Nicotiana tabacum PE=2 SV=1 299 5e-80
tr|Q67G20|Q67G20_ORYSJ Actin-7, putative, expressed OS=Oryza sat... 299 5e-80
tr|Q65XH8|Q65XH8_ORYSJ Os05g0106600 protein OS=Oryza sativa subs... 299 5e-80
tr|Q5XPX5|Q5XPX5_SACOF Actin OS=Saccharum officinarum PE=2 SV=1 299 5e-80
tr|Q5EWZ5|Q5EWZ5_TRITU Actin OS=Triticum turgidum GN=ACT-1 PE=3 ... 299 5e-80
tr|Q5EWZ1|Q5EWZ1_WHEAT Actin OS=Triticum aestivum GN=ACT-1 PE=3 ... 299 5e-80
>tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_226658 PE=3 SV=1
Length = 377
Score = 303 bits (776), Expect = 3e-81
Identities = 145/150 (96%), Positives = 148/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFN PAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRT 150
>tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1
Length = 377
Score = 303 bits (775), Expect = 5e-81
Identities = 146/150 (97%), Positives = 147/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
M D EEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MGDAEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMFDTFNAPAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFDTFNAPAMYVAIQAVLSLYASGRT 150
>tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1
PE=3 SV=1
Length = 377
Score = 302 bits (773), Expect = 8e-81
Identities = 144/150 (96%), Positives = 148/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADGEEVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFN PAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRT 150
>tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_225906 PE=3 SV=1
Length = 377
Score = 302 bits (773), Expect = 8e-81
Identities = 144/150 (96%), Positives = 148/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADGE+VQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFN PAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRT 150
>tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_198730 PE=3 SV=1
Length = 377
Score = 302 bits (773), Expect = 8e-81
Identities = 144/150 (96%), Positives = 148/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADGEEVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFN PAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRT 150
>tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 377
Score = 300 bits (769), Expect = 2e-80
Identities = 143/150 (95%), Positives = 148/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFNAPAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRT 150
>tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid
cultivar GN=ACT1 PE=2 SV=1
Length = 377
Score = 300 bits (768), Expect = 3e-80
Identities = 142/150 (94%), Positives = 149/150 (99%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MA+GEE+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFNAPAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRT 150
>tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar
GN=PACT4 PE=2 SV=1
Length = 377
Score = 300 bits (768), Expect = 3e-80
Identities = 142/150 (94%), Positives = 149/150 (99%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MA+GEE+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFNAPAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRT 150
>tr|B8AWW7|B8AWW7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18129 PE=4 SV=1
Length = 372
Score = 300 bits (768), Expect = 3e-80
Identities = 142/151 (94%), Positives = 149/151 (98%)
Frame = +2
Query: 74 QMADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE 253
+MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE
Sbjct: 57 EMADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE 116
Query: 254 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 433
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 117 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 176
Query: 434 QMTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
+MT IMF+TFN PAMYVAIQAVLSLYASGRT
Sbjct: 177 KMTQIMFETFNVPAMYVAIQAVLSLYASGRT 207
>tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14218 PE=4 SV=1
Length = 377
Score = 300 bits (768), Expect = 3e-80
Identities = 142/150 (94%), Positives = 148/150 (98%)
Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREQ 436
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE+
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTXIMFDTFNAPAMYVAIQAVLSLYASGRT 526
MT IMF+TFNAPAMYVAIQAVLSLYASGRT
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRT 150
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