DK960117 |
Clone id |
TST39A01NGRL0006_I18 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_I18. 5' end sequence. |
Accession |
DK960117 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCTTGCACTACAATGGCTGCTACTGTTGTCGCTGAGGCTGCTAGCGAAGAGATCGACGAT GGCCACACCTACAAATTCGCTGGGACTTATCGTGCTCTCAACACCACCCCTCACAATGAA AACATCGCCTCACATGTTACACAGTTAATAGGATGGACTCCTCTCGTAGAGCTCAAGAAC ATTGCCTCCAAGGAAGGGGCGGTAGCGAGAATCGTTGGCAAGCTCGAATGCCAACAGCCT CTTGGCTCTGTCAAGGACCGCATCGCCCTCCCGATGATTGAAGATGCCGAAAAGCATGGA CTTATCAAACCCGGAGTGAGCACGCTTGTCGAGCCCACGAGCGGGAACACGGCCATTGCT CTGGCTTGCGCTGCAATCCACAAGAAGTATAAAGTTGCAGCAGTGATGCCGGCATCTTCG TCGATTGAACGGCGTATGATTTTGCGAGCTTTAGGGGCAGATGTCTACCTCACGGATCCT GCACTGGGGTTTCCTGGGGTATTTGCCAAAACGGACGAGGTACTGGCCTCGATTCCNAAT AGTTATATGCTGAACCAGCTGGCCTATGGCAACAATCCGGATGCACATTTTCTAACCACA CGCCCGGAAATCTGGAGGGATACTGCAGGTAAAGTGGACATTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23735 |
Definition |
sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea |
Align length |
172 |
Score (bit) |
187.0 |
E-value |
3.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960117|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_I18, 5' (644 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 187 3e-47 sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana ... 187 3e-47 sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 187 5e-47 sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromopla... 185 2e-46 sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 182 1e-45 sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1... 182 1e-45 sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromopla... 180 5e-45 sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabid... 180 5e-45 sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromopla... 179 8e-45 sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromopla... 179 8e-45 sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 179 1e-44 sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2... 177 3e-44 sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2... 177 5e-44 sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=C... 175 2e-43 sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 174 5e-43 sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic ... 163 8e-40 sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (str... 156 8e-38 sp|O32978|CYSK_MYCLE Cysteine synthase A OS=Mycobacterium leprae... 150 4e-36 sp|P0A534|CYSK_MYCTU Cysteine synthase A OS=Mycobacterium tuberc... 149 1e-35 sp|P0A535|CYSK_MYCBO Cysteine synthase A OS=Mycobacterium bovis ... 149 1e-35 sp|P0A1E3|CYSK_SALTY Cysteine synthase A OS=Salmonella typhimuri... 146 8e-35 sp|P0A1E4|CYSK_SALTI Cysteine synthase A OS=Salmonella typhi GN=... 146 8e-35 sp|P0ABK5|CYSK_ECOLI Cysteine synthase A OS=Escherichia coli (st... 146 8e-35 sp|P0ABK6|CYSK_ECO57 Cysteine synthase A OS=Escherichia coli O15... 146 8e-35 sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis... 137 5e-32 sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus... 129 2e-29 sp|O34476|CYSM_BACSU Probable cysteine synthase OS=Bacillus subt... 125 1e-28 sp|P45040|CYSK_HAEIN Cysteine synthase OS=Haemophilus influenzae... 125 2e-28 sp|P63872|CYSK_STAAW Cysteine synthase OS=Staphylococcus aureus ... 124 4e-28 sp|Q6GBX5|CYSK_STAAS Cysteine synthase OS=Staphylococcus aureus ... 124 4e-28
>sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1 Length = 324
Score = 187 bits (476), Expect = 3e-47 Identities = 98/172 (56%), Positives = 115/172 (66%) Frame = +1
Query: 124 IASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHGL 303 IA+ VT+LIG TPLV L ++A EG V R+ KLE +P SVKDRI MI DAEK GL Sbjct: 7 IANDVTELIGNTPLVYLNSVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 64
Query: 304 IKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDPA 483 IKPG S L+EPTSGNT + LA A K YK+ MPAS SIERR+IL A G ++ LTDPA Sbjct: 65 IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPA 124
Query: 484 LGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVD 639 G G AK +E+LA PN YML Q NP H+ TT PEIW+ T GK+D Sbjct: 125 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKID 176
>sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2 Length = 322
Score = 187 bits (476), Expect = 3e-47 Identities = 98/172 (56%), Positives = 113/172 (65%) Frame = +1
Query: 124 IASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHGL 303 IA VT+LIG TPLV L N+A EG V R+ KLE +P SVKDRI MI DAEK GL Sbjct: 5 IAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 62
Query: 304 IKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDPA 483 IKPG S L+EPTSGNT + LA A K YK+ MPAS S ERR+IL A G ++ LTDPA Sbjct: 63 IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122
Query: 484 LGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVD 639 G G AK +E+LA PN YML Q NP H+ TT PEIW+ T GK+D Sbjct: 123 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKID 174
>sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1 Length = 322
Score = 187 bits (474), Expect = 5e-47 Identities = 97/172 (56%), Positives = 114/172 (66%) Frame = +1
Query: 124 IASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHGL 303 IA VT+LIG TPLV L N+A EG V R+ KLE +P SVKDRI MI DAE+ GL Sbjct: 5 IAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGL 62
Query: 304 IKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDPA 483 IKPG S L+EPTSGNT + LA A K YK+ MPAS S+ERR+IL A G ++ LTDPA Sbjct: 63 IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDPA 122
Query: 484 LGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVD 639 G G AK +E+LA PN YML Q NP H+ TT PEIW+ T GK+D Sbjct: 123 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTDGKID 174
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Length = 383
Score = 185 bits (469), Expect = 2e-46 Identities = 100/190 (52%), Positives = 127/190 (66%), Gaps = 4/190 (2%) Frame = +1
Query: 85 TYRALNTTPHNE----NIASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSV 252 T +A++ +P + NIA V+QLIG TP+V L N++ +G+VA I KLE +P SV Sbjct: 50 TCKAVSLSPPSTIEGLNIAEDVSQLIGKTPMVYLNNVS--KGSVANIAAKLESMEPCCSV 107
Query: 253 KDRIALPMIEDAEKHGLIKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIER 432 KDRI MI+DAE+ G+I PG +TLVEPTSGNT I LA A + YK+ MPAS S+ER Sbjct: 108 KDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMER 167
Query: 433 RMILRALGADVYLTDPALGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEI 612 R+IL+A GA++ LTDPA G G K +E+L P+SYML Q NP H+ TT PEI Sbjct: 168 RVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEI 227
Query: 613 WRDTAGKVDI 642 W DT GKVDI Sbjct: 228 WEDTKGKVDI 237
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Length = 325
Score = 182 bits (463), Expect = 1e-45 Identities = 98/175 (56%), Positives = 117/175 (66%) Frame = +1
Query: 118 ENIASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKH 297 ++IAS VT LIG TPLV L + +G A+I KLE +P SVKDRI MI DAE+ Sbjct: 6 QSIASDVTALIGNTPLVYLNKVV--DGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEK 63
Query: 298 GLIKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTD 477 GLI PG S L+EPTSGNT I LA A K YK+ MPAS S+ERR+IL+A GA++ LTD Sbjct: 64 GLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTD 123
Query: 478 PALGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVDI 642 P LG G K DE+ A +PNSY+L Q NP H+ TT PEIW+ TAGKVDI Sbjct: 124 PLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDI 178
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Length = 325
Score = 182 bits (462), Expect = 1e-45 Identities = 97/173 (56%), Positives = 113/173 (65%) Frame = +1
Query: 124 IASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHGL 303 IA VT+LIG TPLV L +A +G VAR+ KLE +P SVKDRI MI DAEK GL Sbjct: 8 IAKDVTELIGKTPLVYLNTVA--DGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGL 65
Query: 304 IKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDPA 483 I PG S L+EPTSGNT I LA A K YK+ MPAS S+ERR ILRA GA++ LTDPA Sbjct: 66 ITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDPA 125
Query: 484 LGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVDI 642 G G K +E+ PNSY+L Q NP H+ TT PEIW+ T GK+DI Sbjct: 126 KGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDI 178
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Length = 386
Score = 180 bits (457), Expect = 5e-45 Identities = 96/174 (55%), Positives = 117/174 (67%) Frame = +1
Query: 121 NIASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHG 300 NIA VTQLIG TP+V L IA +G VA I KLE +P SVKDRI MI DAE+ G Sbjct: 68 NIAEDVTQLIGNTPMVYLNTIA--KGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKG 125
Query: 301 LIKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDP 480 LI PG + LVEPTSGNT I LA A + YK+ MPAS S+ERR+IL+A GA++ LTDP Sbjct: 126 LISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDP 185
Query: 481 ALGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVDI 642 A G G +K +E+L + P++Y+L Q NP H+ TT PEIW DT GK+DI Sbjct: 186 AKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDI 239
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Length = 430
Score = 180 bits (457), Expect = 5e-45 Identities = 96/180 (53%), Positives = 119/180 (66%) Frame = +1
Query: 103 TTPHNENIASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIE 282 T P NIA +V+QLIG TP+V L +IA +G VA I KLE +P SVKDRI M+ Sbjct: 106 TGPDGLNIADNVSQLIGKTPMVYLNSIA--KGCVANIAAKLEIMEPCCSVKDRIGYSMVT 163
Query: 283 DAEKHGLIKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGAD 462 DAE+ G I PG S LVEPTSGNT I LA A + Y++ MPAS S+ERR++L+A GA+ Sbjct: 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAE 223
Query: 463 VYLTDPALGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVDI 642 + LTDPA G G K +E+L + P++YML Q NP H+ TT PEIW DT GKVDI Sbjct: 224 LVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDI 283
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1 Length = 374
Score = 179 bits (455), Expect = 8e-45 Identities = 95/174 (54%), Positives = 116/174 (66%) Frame = +1
Query: 121 NIASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHG 300 NIA VTQLIG TP+V L I +G VA I KLE +P SVKDRI MI DAE+ G Sbjct: 66 NIAEDVTQLIGNTPMVYLNTIV--KGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKG 123
Query: 301 LIKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDP 480 LI PG + LVEPTSGNT I LA A + YK+ MPAS S+ERR+IL+A GA++ LTDP Sbjct: 124 LISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDP 183
Query: 481 ALGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVDI 642 A G G +K +E+L + P++Y+L Q NP H+ TT PEIW DT GK+DI Sbjct: 184 AKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDI 237
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Length = 392
Score = 179 bits (455), Expect = 8e-45 Identities = 95/174 (54%), Positives = 113/174 (64%) Frame = +1
Query: 121 NIASHVTQLIGWTPLVELKNIASKEGAVARIVGKLECQQPLGSVKDRIALPMIEDAEKHG 300 NIA + QLIG TP+V L N+ +G VA + KLE +P SVKDRI MI DAE+ G Sbjct: 74 NIADNAAQLIGKTPMVYLNNVV--KGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKG 131
Query: 301 LIKPGVSTLVEPTSGNTAIALACAAIHKKYKVAAVMPASSSIERRMILRALGADVYLTDP 480 LI PG S LVE TSGNT I LA A K YK+ MPAS S+ERR++LRA GA++ LT+P Sbjct: 132 LITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEP 191
Query: 481 ALGFPGVFAKTDEVLASIPNSYMLNQLAYGNNPDAHFLTTRPEIWRDTAGKVDI 642 A G G K +E+L PNSYML Q NP H+ TT PEIW DT GK+DI Sbjct: 192 AKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDI 245
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9XEA7 |
Definition |
tr|Q9XEA7|Q9XEA7_ORYSA Cysteine synthase OS=Oryza sativa |
Align length |
175 |
Score (bit) |
227.0 |
E-value |
5.0e-58 |
Report |
|