DK960122 |
Clone id |
TST39A01NGRL0006_I23 |
Library |
TST39 |
Length |
669 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_I23. 5' end sequence. |
Accession |
DK960122 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CAATAGGCTAGAGCTTCCGTTTTGCCCGCCTCTGCTTCAGATCTGCTCCATCGGCTCCCC ATCTCTGAGTTTGTGAGGTGCGTGAGTGCGCTTTTGTGACTTCCCCTCTCAGAGTTTGTG CGACACAGATCGTGTGTGCGTGCTCTAAATGGCGGATGAGCCGAAATATGCGTATCCCTA CCAAGGTCAAGGTTACCCTCCGCAGCAACCTTATGGCTATCCGCAGCAAGGTTACCCTCC TCAGGGATACTATCAGCAGCCTCCGCCTGTTGCACCCCCACCGCAATATGCTCAGCAACC GCCTCCGGGCAAGAGTAGCCAGGGTTTCCTCGGAGGCTGTTTAGCTGCACTCTGCTGCTG TTGTCTCTTGGACGAATGCTGTTGCGATCCATCTATCTTCATTGACTGTTGATTGGCCAC TCAGCTATGCTCGAACATATTTTTTGGATTGACACAAGCAACAGTGATGCATTTAGATGA CTATCATGCCATTAGAAAGACTTTTGCTAGTTTTGTACTGAAAACATTATTGTATAGTCT GATCATGGACCAGAAATGCAAATATTCCAGACATGCTCCATGGTTTGTAATAAGGGAGAT AGCTGGGTTGTCATTTTACAACAGGCGGCCAATTCTCTCAACGTTAATATTCAAGCGGTC TTTTTCTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5U462 |
Definition |
sp|Q5U462|CDCP1_MOUSE CUB domain-containing protein 1 OS=Mus musculus |
Align length |
73 |
Score (bit) |
32.3 |
E-value |
2.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960122|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_I23, 5' (669 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5U462|CDCP1_MOUSE CUB domain-containing protein 1 OS=Mus mus... 32 2.3 sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1 32 3.0 sp|Q6IV82|TAZ_PONPY Tafazzin OS=Pongo pygmaeus GN=TAZ PE=3 SV=1 32 3.0 sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1 32 3.0 sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1 32 3.0 sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ P... 32 3.0 sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1 32 3.0 sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1 31 5.2 sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channe... 31 5.2 sp|Q91YU8|SSF1_MOUSE Suppressor of SWI4 1 homolog OS=Mus musculu... 30 8.9 sp|Q5T5P2|SKT_HUMAN Sickle tail protein homolog OS=Homo sapiens ... 30 8.9 sp|Q9A5E1|HTPX_CAUCR Probable protease htpX homolog OS=Caulobact... 30 8.9
>sp|Q5U462|CDCP1_MOUSE CUB domain-containing protein 1 OS=Mus musculus GN=Cdcp1 PE=2 SV=1 Length = 833
Score = 32.3 bits (72), Expect = 2.3 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = +2
Query: 446 GLTQATVMHLDDYHAIRKTFASFVLKTLLYSLIMDQKCKYSRHAPWFVIREIAGLSFYNR 625 G+T + H+D A +F + + M + K + H PWF R ++G S NR Sbjct: 158 GVTHSISGHID---ATEVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHRRNVSGFSIANR 214
Query: 626 RPILSTLIFKRSF 664 I I + F Sbjct: 215 SSIKRLCIIESVF 227
>sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1 Length = 262
Score = 32.0 bits (71), Expect = 3.0 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -1
Query: 645 NVERIGRLL*NDNPAISLIT--NHGACLEYLHFWSMIRLYNNVFSTKLAK 502 N E + L+ N PA LIT NH +C++ H W +++L ++++ KL + Sbjct: 46 NKEVLYELIENRGPATPLITVSNHQSCMDDPHLWGILKL-RHIWNLKLMR 94
>sp|Q6IV82|TAZ_PONPY Tafazzin OS=Pongo pygmaeus GN=TAZ PE=3 SV=1 Length = 292
Score = 32.0 bits (71), Expect = 3.0 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -1
Query: 645 NVERIGRLL*NDNPAISLIT--NHGACLEYLHFWSMIRLYNNVFSTKLAK 502 N E + L+ N PA LIT NH +C++ H W +++L ++++ KL + Sbjct: 46 NKEVLYELIENRGPATPLITVSNHQSCMDDPHLWGILKL-RHIWNLKLMR 94
>sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1 Length = 292
Score = 32.0 bits (71), Expect = 3.0 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -1
Query: 645 NVERIGRLL*NDNPAISLIT--NHGACLEYLHFWSMIRLYNNVFSTKLAK 502 N E + L+ N PA LIT NH +C++ H W +++L ++++ KL + Sbjct: 46 NKEVLYELIENRGPATPLITVSNHQSCMDDPHLWGILKL-RHIWNLKLMR 94
>sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1 Length = 262
Score = 32.0 bits (71), Expect = 3.0 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -1
Query: 645 NVERIGRLL*NDNPAISLIT--NHGACLEYLHFWSMIRLYNNVFSTKLAK 502 N E + L+ N PA LIT NH +C++ H W +++L ++++ KL + Sbjct: 46 NKEVLYELIENRGPATPLITVSNHQSCMDDPHLWGILKL-RHIWNLKLMR 94
>sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1 Length = 292
Score = 32.0 bits (71), Expect = 3.0 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -1
Query: 645 NVERIGRLL*NDNPAISLIT--NHGACLEYLHFWSMIRLYNNVFSTKLAK 502 N E + L+ N PA LIT NH +C++ H W +++L ++++ KL + Sbjct: 46 NKEVLYELIENRGPATPLITVSNHQSCMDDPHLWGILKL-RHIWNLKLMR 94
>sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1 Length = 262
Score = 32.0 bits (71), Expect = 3.0 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -1
Query: 645 NVERIGRLL*NDNPAISLIT--NHGACLEYLHFWSMIRLYNNVFSTKLAK 502 N E + L+ N PA LIT NH +C++ H W +++L ++++ KL + Sbjct: 46 NKEVLYELIENRGPATPLITVSNHQSCMDDPHLWGILKL-RHIWNLKLMR 94
>sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1 Length = 397
Score = 31.2 bits (69), Expect = 5.2 Identities = 23/66 (34%), Positives = 28/66 (42%) Frame = +3
Query: 21 FARLCFRSAPSAPHL*VCEVRECAFVTSPLRVCATQIVCACSKWRMSRNMRIPTKVKVTL 200 F L S P L + + R CA CAT C CSK R +RI +KV Sbjct: 266 FQLLSGSQTASTPELGLVQRRRCAGREDGTGRCATGSRCHCSK---KRKLRIRRSIKVPA 322
Query: 201 RSNLMA 218 SN +A Sbjct: 323 ISNKVA 328
>sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channel CG34123 OS=Drosophila melanogaster GN=CG34123 PE=1 SV=1 Length = 2023
Score = 31.2 bits (69), Expect = 5.2 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Frame = -2
Query: 263 EAADSIPEEGNLAADSHKVAAEGNLDLGRDTHISA--HPPFRARTHDLCRTNSERGSHKS 90 E+ D++ GN D V + + D D + A H R RT LCR NSE S Sbjct: 1478 ESKDTLTPMGNNDDDQTLVGGDNSDDATPDINFEAARHRALRQRTVSLCRRNSETYSLTG 1537
Query: 89 ALTHLTNSEMGSRWSRSEAEAGKTEA 12 A + ++ + S S + T++ Sbjct: 1538 ADINRSHISLNQLASLSRRQMSLTQS 1563
>sp|Q91YU8|SSF1_MOUSE Suppressor of SWI4 1 homolog OS=Mus musculus GN=Ppan PE=2 SV=1 Length = 470
Score = 30.4 bits (67), Expect = 8.9 Identities = 21/74 (28%), Positives = 33/74 (44%) Frame = +3
Query: 78 VRECAFVTSPLRVCATQIVCACSKWRMSRNMRIPTKVKVTLRSNLMAIRSKVTLLRDTIS 257 +++C V PL V I+ + MR+P +T + SK TL+RD +S Sbjct: 70 LKDCVAVAGPLGVTHFLILTKTDNSVYLKLMRLPGGPTLTFQI------SKYTLIRDVVS 123
Query: 258 SLRLLHPHRNMLSN 299 SLR H ++ Sbjct: 124 SLRRHRMHEQQFNH 137
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4WB55 |
Definition |
tr|Q4WB55|Q4WB55_ASPFU Integral membrane protein, putative OS=Aspergillus fumigatus |
Align length |
53 |
Score (bit) |
35.4 |
E-value |
3.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960122|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_I23, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4WB55|Q4WB55_ASPFU Integral membrane protein, putative OS=As... 35 3.3 tr|B0YAQ7|B0YAQ7_ASPFC Integral membrane protein, putative OS=As... 35 3.3 tr|B0SZ98|B0SZ98_CAUSK Sensor protein OS=Caulobacter sp. (strain... 35 4.2 tr|Q7SDK2|Q7SDK2_NEUCR Predicted protein OS=Neurospora crassa GN... 34 7.2 tr|Q2H7Q0|Q2H7Q0_CHAGB Putative uncharacterized protein OS=Chaet... 34 7.3 tr|A9FX47|A9FX47_SORC5 Protein kinase OS=Sorangium cellulosum (s... 34 9.4 tr|A7R3P8|A7R3P8_VITVI Chromosome undetermined scaffold_553, who... 34 9.4 tr|A0Z077|A0Z077_9CYAN Putative uncharacterized protein OS=Lyngb... 34 9.5
>tr|Q4WB55|Q4WB55_ASPFU Integral membrane protein, putative OS=Aspergillus fumigatus GN=AFUA_8G01110 PE=4 SV=1 Length = 293
Score = 35.4 bits (80), Expect = 3.3 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +1
Query: 130 SCVRALNGG*AEICVSLPRSRLPSAATL----WLSAARLPSSGILSAASACCT 276 S V LN EICV++ S LPS TL W +A+R+ SS S A + CT Sbjct: 190 SLVAPLNWSAVEICVAIFISCLPSLKTLITIHWQNASRVTSSNTDSTADSLCT 242
>tr|B0YAQ7|B0YAQ7_ASPFC Integral membrane protein, putative OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_085490 PE=4 SV=1 Length = 293
Score = 35.4 bits (80), Expect = 3.3 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +1
Query: 130 SCVRALNGG*AEICVSLPRSRLPSAATL----WLSAARLPSSGILSAASACCT 276 S V LN EICV++ S LPS TL W +A+R+ SS S A + CT Sbjct: 190 SLVAPLNWSAVEICVAIFISCLPSLKTLITIHWQNASRVTSSNTDSTADSLCT 242
>tr|B0SZ98|B0SZ98_CAUSK Sensor protein OS=Caulobacter sp. (strain K31) GN=Caul_4307 PE=4 SV=1 Length = 806
Score = 35.0 bits (79), Expect = 4.2 Identities = 27/89 (30%), Positives = 36/89 (40%) Frame = -2
Query: 281 VGVQQAEAADSIPEEGNLAADSHKVAAEGNLDLGRDTHISAHPPFRARTHDLCRTNSERG 102 VG + + +++ E A + VAAEG LDLG + HP RA + R RG Sbjct: 159 VGPWEWDVQNNVLELSRTARRNLGVAAEGPLDLGALVE-AVHPDDRALIREKIREAVTRG 217
Query: 101 SHKSALTHLTNSEMGSRWSRSEAEAGKTE 15 L N G RW E + E Sbjct: 218 PLYEVEYRLANHPDGERWIHGRGEVVRDE 246
>tr|Q7SDK2|Q7SDK2_NEUCR Predicted protein OS=Neurospora crassa GN=NCU02793 PE=4 SV=1 Length = 10820
Score = 34.3 bits (77), Expect = 7.2 Identities = 18/71 (25%), Positives = 30/71 (42%) Frame = -2
Query: 368 RDNSSRVQLNSLRGNPGYSCPEAVAEHIAVGVQQAEAADSIPEEGNLAADSHKVAAEGNL 189 RD R + +RG GY P + +HI VG + D + +S + + G Sbjct: 4562 RDLHGRASPSPIRGRSGYRTPTPLGQHIEVGRASGQTGDDSANHVGVLQESDRRLSAGGN 4621
Query: 188 DLGRDTHISAH 156 +G D+ S + Sbjct: 4622 SVGPDSSRSRY 4632
>tr|Q2H7Q0|Q2H7Q0_CHAGB Putative uncharacterized protein OS=Chaetomium globosum GN=CHGG_05315 PE=4 SV=1 Length = 1375
Score = 34.3 bits (77), Expect = 7.3 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = +1
Query: 190 RLPSAATLWLSAARLPSSGILSAASACCTPTAICSA--TASGQE*P 321 ++PSA+ +S P+S SAASA T TA SA ASGQ+ P Sbjct: 965 KIPSASKASVSPTETPASASASAASASATATAAASAASAASGQQKP 1010
>tr|A9FX47|A9FX47_SORC5 Protein kinase OS=Sorangium cellulosum (strain So ce56) GN=sce5317 PE=4 SV=1 Length = 1297
Score = 33.9 bits (76), Expect = 9.4 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%) Frame = -2
Query: 302 AVAEHIAVGVQQAEAADSIPEEGNLAADSH-KVAAEGNLDLGRDTHISAHPPFRART--- 135 A+A H AV ++AEAAD+ G+LA+ H V A+ D P RAR Sbjct: 857 ALARHAAVCGERAEAADAYLALGDLASARHDAVEADRRYDAALQIAEEGDAPRRARALAG 916
Query: 134 -----HDLCRTNSERGSHKSAL 84 + +CR RG AL Sbjct: 917 RGRSRYRMCRVREARGDFGDAL 938
>tr|A7R3P8|A7R3P8_VITVI Chromosome undetermined scaffold_553, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003869001 PE=4 SV=1 Length = 420
Score = 33.9 bits (76), Expect = 9.4 Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 15/112 (13%) Frame = -2
Query: 368 RDNSSRVQLNSLRGNPGYSCPEAVAEHIAVGVQQAEAADSIPEEGNLAADSHKVAAEGNL 189 + + ++QL R Y + +GV +A AA+S+PE NL S K A Sbjct: 193 KKENEKLQLELQRSQANYDVGQCEVIQHLIGVTEAVAANSVPER-NLPVRSSKKAESDYS 251
Query: 188 DLGRDTHISAHPPFRART---------------HDLCRTNSERGSHKSALTH 78 D D S + R+ HDL T RGSH+ H Sbjct: 252 DANSDKEYSVDESYPKRSDTRTTSRNISSVSSGHDLLST---RGSHRHEEWH 300
>tr|A0Z077|A0Z077_9CYAN Putative uncharacterized protein OS=Lyngbya sp. PCC 8106 GN=L8106_09186 PE=4 SV=1 Length = 194
Score = 33.9 bits (76), Expect = 9.5 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = +1
Query: 190 RLPSAATLWLSAARLPSSGILSAASACCTPTAICSATASGQE*P 321 ++PSA T SA +PS + AASA P+A + AS E P Sbjct: 120 KIPSAVTQAASAVAIPSVAVTQAASAVAIPSAAVTQAASAVEIP 163
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