DK960130
Clone id TST39A01NGRL0006_J08
Library
Length 425
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_J08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGAAAGCGTAATCCCTATGGGCATTATTTGCGGAATGTTCTTTGTTATGGGAGAATCGCA
AGATTTTTTACACAAGCTTGCATTTGGCAAGCCAAAGCATCCCTGCTCGGATTCATGGGA
TAGGGCCATGGATGAAAGAGACTATCGTATTAAAAAAGCAGCAGCAGCAGCGAGCAAGCA
GGCATAGAGCATGGAGACTCTTGAAACATTACTTTTGCCATTTGGAATAAGATGAAACTG
GACGAGTTGCCTTTCTCAGCCAGAAGGGCTAGCATATGGCTTTTTGTGGCTTGACATGTA
AAAGCTAATGCATTTTTTTGCGAAAGACATTTACAAGGCTTTAAGCAATTAGCCTGCAAA
CTGTATTTTCTAATGCGAGGCTTTCATGTTTGTGTGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
■■Homology search results ■■ -
sp_hit_id A6V6Z8
Definition sp|A6V6Z8|NUDC_PSEA7 NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain PA7)
Align length 97
Score (bit) 36.2
E-value 0.052
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960130|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_J08, 5'
(396 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A6V6Z8|NUDC_PSEA7 NADH pyrophosphatase OS=Pseudomonas aerugin... 36 0.052
sp|O86062|NUDC_PSEAE NADH pyrophosphatase OS=Pseudomonas aerugin... 33 0.44
sp|Q02KW6|NUDC_PSEAB NADH pyrophosphatase OS=Pseudomonas aerugin... 33 0.44
sp|Q5RG82|NS1BA_DANRE Influenza virus NS1A-binding protein homol... 30 4.9
sp|Q21376|SULF1_CAEEL Putative extracellular sulfatase Sulf-1 ho... 29 8.3

>sp|A6V6Z8|NUDC_PSEA7 NADH pyrophosphatase OS=Pseudomonas aeruginosa
(strain PA7) GN=nudC PE=3 SV=1
Length = 278

Score = 36.2 bits (82), Expect = 0.052
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Frame = +3

Query: 18 WALFAECS--LLWENRKIFYTSLHLASQSIPARI-HGIGPWMKETIVLKKQQQQRASRHR 188
WAL A C L ++ + + L Q +P HG+G W E + L + +
Sbjct: 20 WAL-AHCQQRFLQDDNGLLFPREWLKRQDLPLLAEHGVGHWQGEPVYLLELDEPLELPGM 78

Query: 189 AWRLLKHYFCHLE*DETGRVAFLSQKG---*HMAFCG 290
AW L+ + H + D+ + + SQ G H FCG
Sbjct: 79 AWTPLRQFMLHGDFDQFCMLGYASQIGIWARHNRFCG 115


>sp|O86062|NUDC_PSEAE NADH pyrophosphatase OS=Pseudomonas aeruginosa
GN=nudC PE=3 SV=2
Length = 278

Score = 33.1 bits (74), Expect = 0.44
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +3

Query: 18 WALFAECS--LLWENRKIFYTSLHLASQSIPARI-HGIGPWMKETIVLKKQQQQRASRHR 188
W L A C L ++ + + L Q +P HG+G W E + + + +
Sbjct: 20 WVL-AHCQQRFLQDDNGLLFPREWLKRQELPLLAEHGVGHWQGEPVYVLELDEPIELPGM 78

Query: 189 AWRLLKHYFCHLE*DETGRVAFLSQKG---*HMAFCG 290
AW L+ + H + D+ + + SQ G H FCG
Sbjct: 79 AWAPLRQFMLHGDFDQFCMLGYASQIGIWARHNRFCG 115


>sp|Q02KW6|NUDC_PSEAB NADH pyrophosphatase OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=nudC PE=3 SV=1
Length = 278

Score = 33.1 bits (74), Expect = 0.44
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +3

Query: 18 WALFAECS--LLWENRKIFYTSLHLASQSIPARI-HGIGPWMKETIVLKKQQQQRASRHR 188
W L A C L ++ + + L Q +P HG+G W E + + + +
Sbjct: 20 WVL-AHCQQRFLQDDNGLLFPREWLKRQELPLLAEHGVGHWQGEPVYVLELDEPIELPGM 78

Query: 189 AWRLLKHYFCHLE*DETGRVAFLSQKG---*HMAFCG 290
AW L+ + H + D+ + + SQ G H FCG
Sbjct: 79 AWAPLRQFMLHGDFDQFCMLGYASQIGIWARHNRFCG 115


>sp|Q5RG82|NS1BA_DANRE Influenza virus NS1A-binding protein homolog
A OS=Danio rerio GN=ivns1abpa PE=2 SV=1
Length = 643

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2

Query: 17 MGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYR 148
M ++ G +VMG S +L+ G+ +P +D W + + R R
Sbjct: 410 MAVLMGQLYVMGGSNGHSDELSCGETYNPNADEWTQVPELRTNR 453


>sp|Q21376|SULF1_CAEEL Putative extracellular sulfatase Sulf-1
homolog OS=Caenorhabditis elegans GN=sul-1 PE=2 SV=1
Length = 709

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3

Query: 54 NRKIFYTSLHLASQSIPARIHGIGPWMKETIVLKKQQQQRASRHRAWR 197
N I T LH+A PAR++G + E + LKK++++ + + WR
Sbjct: 353 NVDIAPTMLHIAGVPKPARMNGRS--LLELVALKKKKKKHMTALKPWR 398


tr_hit_id A9U5Z5
Definition tr|A9U5Z5|A9U5Z5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 50
Score (bit) 70.5
E-value 4.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960130|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_J08, 5'
(396 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9U5Z5|A9U5Z5_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11
tr|A9S621|A9S621_PHYPA Predicted protein (Fragment) OS=Physcomit... 70 4e-11
tr|A9NYL4|A9NYL4_PICSI Putative uncharacterized protein OS=Picea... 65 2e-09
tr|B6TSJ6|B6TSJ6_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08
tr|B6SP36|B6SP36_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08
tr|Q1STQ6|Q1STQ6_MEDTR Putative uncharacterized protein OS=Medic... 59 1e-07
tr|A7QLC8|A7QLC8_VITVI Chromosome chr11 scaffold_118, whole geno... 59 1e-07
tr|Q9C9Z5|Q9C9Z5_ARATH Putative uncharacterized protein F17O14.8... 58 3e-07
tr|Q84MD9|Q84MD9_ARATH At3g08610 OS=Arabidopsis thaliana PE=4 SV=1 58 3e-07
tr|Q5KQI2|Q5KQI2_ORYSJ Os05g0481600 protein OS=Oryza sativa subs... 57 5e-07
tr|A2Y5U1|A2Y5U1_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07
tr|A9PEL5|A9PEL5_POPTR Putative uncharacterized protein OS=Popul... 53 9e-06
tr|A9P1A1|A9P1A1_PICSI Putative uncharacterized protein OS=Picea... 49 1e-04
tr|A4RWR5|A4RWR5_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.058
tr|Q1E7E0|Q1E7E0_COCIM Putative uncharacterized protein OS=Cocci... 39 0.099
tr|A8PXG6|A8PXG6_MALGO Putative uncharacterized protein OS=Malas... 39 0.099
tr|Q4PA20|Q4PA20_USTMA Putative uncharacterized protein OS=Ustil... 37 0.49
tr|B6HQ71|B6HQ71_PENCH Pc22g06850 protein OS=Penicillium chrysog... 37 0.49
tr|B2AR06|B2AR06_PODAN Predicted CDS Pa_4_9060 OS=Podospora anse... 37 0.64
tr|B8LW11|B8LW11_9EURO Putative uncharacterized protein OS=Talar... 35 1.4
tr|B6QQE9|B6QQE9_PENMA Putative uncharacterized protein OS=Penic... 35 2.4
tr|A2QJ43|A2QJ43_ASPNC Contig An04c0180, complete genome. OS=Asp... 34 4.1
tr|A1CI28|A1CI28_ASPCL Putative uncharacterized protein OS=Asper... 34 4.1
tr|Q6ZS31|Q6ZS31_HUMAN cDNA FLJ45872 fis, clone OCBBF3005843 OS=... 33 5.4
tr|Q4WPY6|Q4WPY6_ASPFU Putative uncharacterized protein OS=Asper... 33 5.4
tr|Q2MV33|Q2MV33_MELLI Hesp-767 OS=Melampsora lini PE=4 SV=1 33 5.4
tr|B0Y6S6|B0Y6S6_ASPFC Putative uncharacterized protein OS=Asper... 33 5.4
tr|B7VB54|B7VB54_PSEAE Putative NADH pyrophosphatase OS=Pseudomo... 33 7.1
tr|A3L834|A3L834_PSEAE Putative uncharacterized protein OS=Pseud... 33 7.1
tr|A3KT28|A3KT28_PSEAE Putative uncharacterized protein OS=Pseud... 33 7.1

>tr|A9U5Z5|A9U5Z5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_201296 PE=4 SV=1
Length = 69

Score = 70.5 bits (171), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+++PMGII M FVMG SQ +H +GKPKHP D+WDRAMDERD R+
Sbjct: 4 EAMLPMGIISAMIFVMGTSQYVVHTSIYGKPKHPRHDAWDRAMDERDARL 53


>tr|A9S621|A9S621_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_19948 PE=4 SV=1
Length = 58

Score = 70.5 bits (171), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+++PMGII M FVMG SQ +H +GKPKHP D+WDRAMDERD R+
Sbjct: 6 EAMLPMGIISAMIFVMGTSQYVVHTSIYGKPKHPRHDAWDRAMDERDARL 55


>tr|A9NYL4|A9NYL4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 69

Score = 65.1 bits (157), Expect = 2e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERD 142
E+++P+GII G VMG SQ F+HK A+G+PKH SD WD AMD RD
Sbjct: 7 EAMLPLGIIAGALCVMGASQHFIHKAAYGRPKHVRSDKWDVAMDRRD 53


>tr|B6TSJ6|B6TSJ6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 64

Score = 61.2 bits (147), Expect = 2e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+V+P+GII GM +MG +Q F+HK A G+PKH +D WD AM+ RD ++
Sbjct: 8 EAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKL 57


>tr|B6SP36|B6SP36_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 64

Score = 61.2 bits (147), Expect = 2e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+V+P+GII GM +MG +Q F+HK A G+PKH +D WD AM+ RD ++
Sbjct: 8 EAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKL 57


>tr|Q1STQ6|Q1STQ6_MEDTR Putative uncharacterized protein OS=Medicago
truncatula GN=MtrDRAFT_AC136139g5v2 PE=4 SV=1
Length = 64

Score = 58.9 bits (141), Expect = 1e-07
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+++P+GII GM VMG +Q ++H+ A G+PKH +D WD AM+ RD ++
Sbjct: 7 EAMLPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDLWDVAMERRDKKL 56


>tr|A7QLC8|A7QLC8_VITVI Chromosome chr11 scaffold_118, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001539001
PE=4 SV=1
Length = 66

Score = 58.9 bits (141), Expect = 1e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
++ +P+GII GM VMG +Q ++HK A G+PKH +D WD AM+ RD ++
Sbjct: 7 QAALPLGIIAGMLCVMGNAQFYIHKAAHGRPKHVGNDLWDVAMERRDKKL 56


>tr|Q9C9Z5|Q9C9Z5_ARATH Putative uncharacterized protein F17O14.8
(Putative uncharacterized protein At3g08610) (Putative
uncharacterized protein) OS=Arabidopsis thaliana
GN=At3g08610 PE=4 SV=1
Length = 65

Score = 57.8 bits (138), Expect = 3e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+++P+GII GM +MG SQ ++HK G+PKH D WD AM+ RD ++
Sbjct: 7 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKV 56


>tr|Q84MD9|Q84MD9_ARATH At3g08610 OS=Arabidopsis thaliana PE=4 SV=1
Length = 73

Score = 57.8 bits (138), Expect = 3e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151
E+++P+GII GM +MG SQ ++HK G+PKH D WD AM+ RD ++
Sbjct: 15 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKV 64


>tr|Q5KQI2|Q5KQI2_ORYSJ Os05g0481600 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0095J22.8 PE=4 SV=1
Length = 66

Score = 57.0 bits (136), Expect = 5e-07
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2

Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERD 142
E+++P+GII GM +MG +Q ++H+ A G+PKH +D+WD AM RD
Sbjct: 8 EAMLPLGIIGGMLCIMGNAQYYIHRAAHGRPKHIGNDNWDMAMARRD 54