DK960130 |
Clone id |
TST39A01NGRL0006_J08 |
Library |
TST39 |
Length |
425 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_J08. 5' end sequence. |
Accession |
DK960130 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL519Contig1 |
Sequence |
GGAAAGCGTAATCCCTATGGGCATTATTTGCGGAATGTTCTTTGTTATGGGAGAATCGCA AGATTTTTTACACAAGCTTGCATTTGGCAAGCCAAAGCATCCCTGCTCGGATTCATGGGA TAGGGCCATGGATGAAAGAGACTATCGTATTAAAAAAGCAGCAGCAGCAGCGAGCAAGCA GGCATAGAGCATGGAGACTCTTGAAACATTACTTTTGCCATTTGGAATAAGATGAAACTG GACGAGTTGCCTTTCTCAGCCAGAAGGGCTAGCATATGGCTTTTTGTGGCTTGACATGTA AAAGCTAATGCATTTTTTTGCGAAAGACATTTACAAGGCTTTAAGCAATTAGCCTGCAAA CTGTATTTTCTAATGCGAGGCTTTCATGTTTGTGTGAAAAAAAAAAAAAAAAAAAAAAAA AAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A6V6Z8 |
Definition |
sp|A6V6Z8|NUDC_PSEA7 NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain PA7) |
Align length |
97 |
Score (bit) |
36.2 |
E-value |
0.052 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U5Z5 |
Definition |
tr|A9U5Z5|A9U5Z5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
50 |
Score (bit) |
70.5 |
E-value |
4.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960130|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_J08, 5' (396 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U5Z5|A9U5Z5_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9S621|A9S621_PHYPA Predicted protein (Fragment) OS=Physcomit... 70 4e-11 tr|A9NYL4|A9NYL4_PICSI Putative uncharacterized protein OS=Picea... 65 2e-09 tr|B6TSJ6|B6TSJ6_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08 tr|B6SP36|B6SP36_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08 tr|Q1STQ6|Q1STQ6_MEDTR Putative uncharacterized protein OS=Medic... 59 1e-07 tr|A7QLC8|A7QLC8_VITVI Chromosome chr11 scaffold_118, whole geno... 59 1e-07 tr|Q9C9Z5|Q9C9Z5_ARATH Putative uncharacterized protein F17O14.8... 58 3e-07 tr|Q84MD9|Q84MD9_ARATH At3g08610 OS=Arabidopsis thaliana PE=4 SV=1 58 3e-07 tr|Q5KQI2|Q5KQI2_ORYSJ Os05g0481600 protein OS=Oryza sativa subs... 57 5e-07 tr|A2Y5U1|A2Y5U1_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07 tr|A9PEL5|A9PEL5_POPTR Putative uncharacterized protein OS=Popul... 53 9e-06 tr|A9P1A1|A9P1A1_PICSI Putative uncharacterized protein OS=Picea... 49 1e-04 tr|A4RWR5|A4RWR5_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.058 tr|Q1E7E0|Q1E7E0_COCIM Putative uncharacterized protein OS=Cocci... 39 0.099 tr|A8PXG6|A8PXG6_MALGO Putative uncharacterized protein OS=Malas... 39 0.099 tr|Q4PA20|Q4PA20_USTMA Putative uncharacterized protein OS=Ustil... 37 0.49 tr|B6HQ71|B6HQ71_PENCH Pc22g06850 protein OS=Penicillium chrysog... 37 0.49 tr|B2AR06|B2AR06_PODAN Predicted CDS Pa_4_9060 OS=Podospora anse... 37 0.64 tr|B8LW11|B8LW11_9EURO Putative uncharacterized protein OS=Talar... 35 1.4 tr|B6QQE9|B6QQE9_PENMA Putative uncharacterized protein OS=Penic... 35 2.4 tr|A2QJ43|A2QJ43_ASPNC Contig An04c0180, complete genome. OS=Asp... 34 4.1 tr|A1CI28|A1CI28_ASPCL Putative uncharacterized protein OS=Asper... 34 4.1 tr|Q6ZS31|Q6ZS31_HUMAN cDNA FLJ45872 fis, clone OCBBF3005843 OS=... 33 5.4 tr|Q4WPY6|Q4WPY6_ASPFU Putative uncharacterized protein OS=Asper... 33 5.4 tr|Q2MV33|Q2MV33_MELLI Hesp-767 OS=Melampsora lini PE=4 SV=1 33 5.4 tr|B0Y6S6|B0Y6S6_ASPFC Putative uncharacterized protein OS=Asper... 33 5.4 tr|B7VB54|B7VB54_PSEAE Putative NADH pyrophosphatase OS=Pseudomo... 33 7.1 tr|A3L834|A3L834_PSEAE Putative uncharacterized protein OS=Pseud... 33 7.1 tr|A3KT28|A3KT28_PSEAE Putative uncharacterized protein OS=Pseud... 33 7.1
>tr|A9U5Z5|A9U5Z5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_201296 PE=4 SV=1 Length = 69
Score = 70.5 bits (171), Expect = 4e-11 Identities = 31/50 (62%), Positives = 38/50 (76%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+++PMGII M FVMG SQ +H +GKPKHP D+WDRAMDERD R+ Sbjct: 4 EAMLPMGIISAMIFVMGTSQYVVHTSIYGKPKHPRHDAWDRAMDERDARL 53
>tr|A9S621|A9S621_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19948 PE=4 SV=1 Length = 58
Score = 70.5 bits (171), Expect = 4e-11 Identities = 31/50 (62%), Positives = 38/50 (76%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+++PMGII M FVMG SQ +H +GKPKHP D+WDRAMDERD R+ Sbjct: 6 EAMLPMGIISAMIFVMGTSQYVVHTSIYGKPKHPRHDAWDRAMDERDARL 55
>tr|A9NYL4|A9NYL4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 69
Score = 65.1 bits (157), Expect = 2e-09 Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERD 142 E+++P+GII G VMG SQ F+HK A+G+PKH SD WD AMD RD Sbjct: 7 EAMLPLGIIAGALCVMGASQHFIHKAAYGRPKHVRSDKWDVAMDRRD 53
>tr|B6TSJ6|B6TSJ6_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 64
Score = 61.2 bits (147), Expect = 2e-08 Identities = 26/50 (52%), Positives = 37/50 (74%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+V+P+GII GM +MG +Q F+HK A G+PKH +D WD AM+ RD ++ Sbjct: 8 EAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKL 57
>tr|B6SP36|B6SP36_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 64
Score = 61.2 bits (147), Expect = 2e-08 Identities = 26/50 (52%), Positives = 37/50 (74%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+V+P+GII GM +MG +Q F+HK A G+PKH +D WD AM+ RD ++ Sbjct: 8 EAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKL 57
>tr|Q1STQ6|Q1STQ6_MEDTR Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC136139g5v2 PE=4 SV=1 Length = 64
Score = 58.9 bits (141), Expect = 1e-07 Identities = 24/50 (48%), Positives = 37/50 (74%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+++P+GII GM VMG +Q ++H+ A G+PKH +D WD AM+ RD ++ Sbjct: 7 EAMLPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDLWDVAMERRDKKL 56
>tr|A7QLC8|A7QLC8_VITVI Chromosome chr11 scaffold_118, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001539001 PE=4 SV=1 Length = 66
Score = 58.9 bits (141), Expect = 1e-07 Identities = 24/50 (48%), Positives = 36/50 (72%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 ++ +P+GII GM VMG +Q ++HK A G+PKH +D WD AM+ RD ++ Sbjct: 7 QAALPLGIIAGMLCVMGNAQFYIHKAAHGRPKHVGNDLWDVAMERRDKKL 56
>tr|Q9C9Z5|Q9C9Z5_ARATH Putative uncharacterized protein F17O14.8 (Putative uncharacterized protein At3g08610) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At3g08610 PE=4 SV=1 Length = 65
Score = 57.8 bits (138), Expect = 3e-07 Identities = 24/50 (48%), Positives = 35/50 (70%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+++P+GII GM +MG SQ ++HK G+PKH D WD AM+ RD ++ Sbjct: 7 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKV 56
>tr|Q84MD9|Q84MD9_ARATH At3g08610 OS=Arabidopsis thaliana PE=4 SV=1 Length = 73
Score = 57.8 bits (138), Expect = 3e-07 Identities = 24/50 (48%), Positives = 35/50 (70%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERDYRI 151 E+++P+GII GM +MG SQ ++HK G+PKH D WD AM+ RD ++ Sbjct: 15 EAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKV 64
>tr|Q5KQI2|Q5KQI2_ORYSJ Os05g0481600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0095J22.8 PE=4 SV=1 Length = 66
Score = 57.0 bits (136), Expect = 5e-07 Identities = 23/47 (48%), Positives = 35/47 (74%) Frame = +2
Query: 2 ESVIPMGIICGMFFVMGESQDFLHKLAFGKPKHPCSDSWDRAMDERD 142 E+++P+GII GM +MG +Q ++H+ A G+PKH +D+WD AM RD Sbjct: 8 EAMLPLGIIGGMLCIMGNAQYYIHRAAHGRPKHIGNDNWDMAMARRD 54
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