DK960134 |
Clone id |
TST39A01NGRL0006_J12 |
Library |
TST39 |
Length |
630 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_J12. 5' end sequence. |
Accession |
DK960134 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL656Contig1 |
Sequence |
TTCAGAGCAGAAGGAGAATGTTAAGGGCGAGGGCGTCTTGGCGGGGTCTTCGCTTCTTGG GCGGGTTACCTGCTCATCCATCTTCGTCTCCGTGTCCGAGCAGGCTTCTCCGAATTCAAG CTGTCGTCTTCTCTCCGTCATACTCTCCATCTCGACCACTGCCTGTCATTCGGCATTTCA CGTCCACTCCTGGTGGATCTAGCTCGTCTGTGATTGCAGTGAAGAATGACGCAGAATATG TGAGTGCTATCAATTTGGCACAAGAAAACAATGGCCTTGCCGTAGTCTACTTCACGGCAA AATGGTGTGGACCATGTAGAATGATATCTCCAATTGTTGATGAGCTAAGCACAAAGTATG ACAAAGCGACATTCTTGAAAGTGGACATTGACGAGGAGAAACTTCGAGAAGTGGTGTCGG AGGAAAAAATAACATCAGTGCCAACATTTAGGTACTTTCGTGGTGGCAAATCGGTTGGAG AATTGATTGGCGCTGACGCACGTTTGTTAAAGGATAAAGTTGCAGCACTCTGTGGGTACT AGCTGTCTTGGGCTTCGGAATGAAATCGATAGGGAGATTCTGCACCTCGTAGAGAGTCTT TGCTAAAAGTCACGCAATTTCGTTAGCTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65049 |
Definition |
sp|O65049|TRXH_PICMA Thioredoxin H-type OS=Picea mariana |
Align length |
111 |
Score (bit) |
86.3 |
E-value |
1.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P227 |
Definition |
tr|A9P227|A9P227_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
134 |
Score (bit) |
120.0 |
E-value |
5.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960134|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_J12, 5' (630 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P227|A9P227_PICSI Putative uncharacterized protein OS=Picea... 120 5e-26 tr|A9U4Y2|A9U4Y2_PHYPA Predicted protein OS=Physcomitrella paten... 116 1e-24 tr|O64764|O64764_ARATH Putative thioredoxin (At2g35010) OS=Arabi... 111 4e-23 tr|Q93VQ9|Q93VQ9_ARATH At1g31020/F17F8_6 (At2g20920/F5H14.11) (T... 103 8e-21 tr|Q257C6|Q257C6_PEA Putative thioredoxin OS=Pisum sativum GN=tr... 103 1e-20 tr|Q8VZH4|Q8VZH4_TOBAC Tetratricoredoxin OS=Nicotiana tabacum PE... 102 1e-20 tr|Q9FYJ3|Q9FYJ3_ARATH F17F8.6 OS=Arabidopsis thaliana PE=4 SV=1 98 5e-19 tr|B8B186|B8B186_ORYSI Putative uncharacterized protein OS=Oryza... 98 5e-19 tr|A7PH95|A7PH95_VITVI Chromosome chr17 scaffold_16, whole genom... 97 6e-19 tr|Q84XS0|Q84XS0_CHLRE Thioredoxin o OS=Chlamydomonas reinhardti... 96 2e-18 tr|Q93X83|Q93X83_9MAGN Hsp70 interacting protein/thioredoxin chi... 96 2e-18 tr|B6TFF1|B6TFF1_MAIZE Thioredoxin domain-containing protein 2 O... 95 3e-18 tr|Q8VWG7|Q8VWG7_ARATH Tetratricoredoxin (Putative HSC70-interac... 93 1e-17 tr|Q7XJ63|Q7XJ63_ARATH At3g17880 OS=Arabidopsis thaliana PE=2 SV=1 93 1e-17 tr|Q655X0|Q655X0_ORYSJ Os06g0665900 protein OS=Oryza sativa subs... 93 1e-17 tr|A5DPF9|A5DPF9_PICGU Putative uncharacterized protein OS=Pichi... 93 1e-17 tr|Q9LVI2|Q9LVI2_ARATH Thioredoxin-like protein OS=Arabidopsis t... 93 1e-17 tr|Q8GW51|Q8GW51_ARATH Putative thioredoxin OS=Arabidopsis thali... 93 1e-17 tr|Q8LG82|Q8LG82_ARATH Tetratricoredoxin OS=Arabidopsis thaliana... 92 2e-17 tr|Q6BJ80|Q6BJ80_DEBHA DEHA2G04488p OS=Debaryomyces hansenii GN=... 91 4e-17 tr|A3GI91|A3GI91_PICST Thioredoxin OS=Pichia stipitis GN=TRX1 PE... 91 6e-17 tr|Q5YBB1|Q5YBB1_HELSJ Thioredoxin H OS=Helicosporidium sp. subs... 90 1e-16 tr|Q6ES52|Q6ES52_ORYSJ Os09g0401200 protein OS=Oryza sativa subs... 90 1e-16 tr|B8BF58|B8BF58_ORYSI Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A9NWD4|A9NWD4_PICSI Putative uncharacterized protein OS=Picea... 90 1e-16 tr|A3BYM7|A3BYM7_ORYSJ Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A9NZI2|A9NZI2_PICSI Putative uncharacterized protein OS=Picea... 88 4e-16 tr|Q5ZF46|Q5ZF46_PLAMJ Thioredoxin 3 OS=Plantago major GN=trx3 P... 88 5e-16 tr|Q6Z4I3|Q6Z4I3_ORYSJ Os07g0190800 protein OS=Oryza sativa subs... 87 6e-16 tr|A2YJ11|A2YJ11_ORYSI Putative uncharacterized protein OS=Oryza... 87 6e-16
>tr|A9P227|A9P227_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 120 bits (302), Expect = 5e-26 Identities = 60/134 (44%), Positives = 84/134 (62%) Frame = +3
Query: 129 FSPSYSPSRPLPVIRHFTSTPGGSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWC 308 +SPS + +R L + SS V+ V +DAE+ +A++ AQ+N GLA+ YFTA WC Sbjct: 56 WSPSSTSTRSL--------SASSGSSKVLLVNSDAEFSNALSKAQDNQGLAIAYFTATWC 107
Query: 309 GPCRMISPIVDELSTKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELI 488 GPCR I+P+V+ LST Y T LK+DID + L + +TSVPTF +++ G V +LI Sbjct: 108 GPCRAIAPVVENLSTSYSNVTILKLDIDLDTLSNSLQTSGVTSVPTFHFYKNGAKVADLI 167
Query: 489 GADARLLKDKVAAL 530 GAD LK+ V L Sbjct: 168 GADPHRLKEIVGNL 181
>tr|A9U4Y2|A9U4Y2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173694 PE=4 SV=1 Length = 288
Score = 116 bits (290), Expect = 1e-24 Identities = 59/121 (48%), Positives = 80/121 (66%) Frame = +3
Query: 168 IRHFTSTPGGSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWCGPCRMISPIVDEL 347 +RHF S+PGG+S+ VI V EY +N A+E+ LAVVYFTAKWCGPCR ISP+V+ L Sbjct: 65 LRHFASSPGGTSA-VIEVSTADEYKRLLNEAKEDKKLAVVYFTAKWCGPCRHISPVVNTL 123
Query: 348 STKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAA 527 S ++ FLKVD+DE +L++ + I +VP+F++ G V GAD+ LKD V Sbjct: 124 SQEFGDVKFLKVDLDEPELQKTIEMAGIAAVPSFQFHLKGNMVSGFSGADSNKLKDTVQE 183
Query: 528 L 530 L Sbjct: 184 L 184
>tr|O64764|O64764_ARATH Putative thioredoxin (At2g35010) OS=Arabidopsis thaliana GN=At2g35010 PE=2 SV=1 Length = 194
Score = 111 bits (277), Expect = 4e-23 Identities = 55/124 (44%), Positives = 80/124 (64%) Frame = +3
Query: 159 LPVIRHFTSTPGGSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWCGPCRMISPIV 338 LP R S GG + V+ VK++ E+++A++ AQ+ + +V YFTA WCGPCR ISP++ Sbjct: 70 LPHRRSLCSEAGGENG-VVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVI 128
Query: 339 DELSTKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDK 518 ELS +Y T KVDIDE + +S+ IT+VPT +F+GG GE++GAD LK+ Sbjct: 129 VELSKQYPDVTTYKVDIDEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGADVTKLKNL 188
Query: 519 VAAL 530 + L Sbjct: 189 MEQL 192
>tr|Q93VQ9|Q93VQ9_ARATH At1g31020/F17F8_6 (At2g20920/F5H14.11) (Thioredoxin o) OS=Arabidopsis thaliana GN=TRXO2 PE=2 SV=1 Length = 159
Score = 103 bits (257), Expect = 8e-21 Identities = 48/112 (42%), Positives = 73/112 (65%) Frame = +3
Query: 195 GSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWCGPCRMISPIVDELSTKYDKATF 374 G SS + +K++AE+ SA++ A++ + +V YFTA WCGPCR+ISP++ ELS KY T Sbjct: 46 GDRSSFVVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTT 105
Query: 375 LKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 530 KVDIDE L + + +++VPT ++F+GG E++G D LK + L Sbjct: 106 YKVDIDEGGLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDVVRLKSVMEQL 157
>tr|Q257C6|Q257C6_PEA Putative thioredoxin OS=Pisum sativum GN=trx PE=2 SV=1 Length = 181
Score = 103 bits (256), Expect = 1e-20 Identities = 58/130 (44%), Positives = 78/130 (60%), Gaps = 1/130 (0%) Frame = +3
Query: 120 AVVFSPSYSPSRPLPVIRHFTSTPGGSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTA 299 A + S SYS L R +S +S +I V + E+ + Q+++ A+ YFTA Sbjct: 43 ATLASSSYSSHLSLHHSRSLSSA--SASPGLILVNSAEEFNKILTKIQDDSLHAIFYFTA 100
Query: 300 KWCGPCRMISPIVDELSTKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVG 479 WCGPCR ISPIV ELS KY K+DID+E +++ +S +ITSVPT +F+ GK Sbjct: 101 VWCGPCRFISPIVGELSKKYPNVATYKIDIDQEAIQDTLSRLQITSVPTLHFFQNGKKTD 160
Query: 480 ELIGAD-ARL 506 ELIGAD ARL Sbjct: 161 ELIGADVARL 170
>tr|Q8VZH4|Q8VZH4_TOBAC Tetratricoredoxin OS=Nicotiana tabacum PE=2 SV=1 Length = 386
Score = 102 bits (255), Expect = 1e-20 Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Frame = +3
Query: 171 RHFTSTPGGSS----SSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWCGPCRMISPIV 338 +H S P +S +I + + +E + +N+A + LA++YFTA WCGPCR ISP+ Sbjct: 263 QHKASDPDSASVLNGGKIIGIHSVSELETKLNVASRASRLAILYFTATWCGPCRFISPVF 322
Query: 339 DELSTKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDK 518 L+ KY KA FLK DIDE R+ S ++SVP F + + GK V ++GAD LL+ K Sbjct: 323 TSLAEKYPKAAFLKADIDE--ARDAASRWNVSSVPAFFFIKNGKEVDRVVGADKNLLEKK 380
Query: 519 VAALCG 536 + G Sbjct: 381 IVQYAG 386
>tr|Q9FYJ3|Q9FYJ3_ARATH F17F8.6 OS=Arabidopsis thaliana PE=4 SV=1 Length = 153
Score = 97.8 bits (242), Expect = 5e-19 Identities = 45/104 (43%), Positives = 69/104 (66%) Frame = +3
Query: 219 VKNDAEYVSAINLAQENNGLAVVYFTAKWCGPCRMISPIVDELSTKYDKATFLKVDIDEE 398 +K++AE+ SA++ A++ + +V YFTA WCGPCR+ISP++ ELS KY T KVDIDE Sbjct: 48 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 107
Query: 399 KLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 530 L + + +++VPT ++F+GG E++G D LK + L Sbjct: 108 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDVVRLKSVMEQL 151
>tr|B8B186|B8B186_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24031 PE=4 SV=1 Length = 172
Score = 97.8 bits (242), Expect = 5e-19 Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Frame = +3
Query: 135 PSYSPSRPLPVI-RHFTSTPGGSSSSVIAVKNDAEYVSAINLAQENNGL-AVVYFTAKWC 308 P S P P + R F++TP S S + V AE ++I E L AV Y+TA WC Sbjct: 37 PPLSSPPPFPSLSRLFSTTPSSSGDSSMVVVGSAESFTSIMSKVEAEKLPAVFYYTAVWC 96
Query: 309 GPCRMISPIVDELSTKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELI 488 GPCR ++P++ +LS++Y K KVDID + +S+ KI SVPTF ++ G+ GE++ Sbjct: 97 GPCRAMAPVISKLSSRYPKIPIYKVDIDMNGVGSKLSDLKIFSVPTFHFYYQGRKTGEVV 156
Query: 489 GADARLLKDKVAAL 530 GA+A L+ + +L Sbjct: 157 GANATKLESTMESL 170
>tr|A7PH95|A7PH95_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017858001 PE=4 SV=1 Length = 155
Score = 97.4 bits (241), Expect = 6e-19 Identities = 49/134 (36%), Positives = 74/134 (55%) Frame = +3
Query: 135 PSYSPSRPLPVIRHFTSTPGGSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWCGP 314 P S R P + + V+A+ + +E + + A + + LA++YFTA WCGP Sbjct: 22 PVPSHLRVFPSLTDSEAAAAFKDGQVMAIHSSSELETKLKAASKTSRLAILYFTATWCGP 81
Query: 315 CRMISPIVDELSTKYDKATFLKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGA 494 CR ISP+ LS KY K FLKVDID ++V ++SVPTF + + GK + +++G Sbjct: 82 CRYISPVFTSLSGKYPKVVFLKVDID--GAQDVAVSWNVSSVPTFFFIKNGKEIDKVVGV 139
Query: 495 DARLLKDKVAALCG 536 D L+ K+A G Sbjct: 140 DKSALETKIAQYAG 153
>tr|Q84XS0|Q84XS0_CHLRE Thioredoxin o OS=Chlamydomonas reinhardtii GN=TRXo PE=2 SV=1 Length = 150
Score = 95.9 bits (237), Expect = 2e-18 Identities = 44/109 (40%), Positives = 65/109 (59%) Frame = +3
Query: 195 GSSSSVIAVKNDAEYVSAINLAQENNGLAVVYFTAKWCGPCRMISPIVDELSTKYDKATF 374 G+ V+ V +D ++ + + + L + FTAKWCGPCRMI+P+ LS KY TF Sbjct: 37 GAPDRVVEVTSDQDFSAKLADVAGSGSLMICDFTAKWCGPCRMIAPVFSSLSNKYTDVTF 96
Query: 375 LKVDIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKV 521 +K+DID L V++ IT VPTF Y++GG+ V GA A +L+ + Sbjct: 97 VKIDIDNTALGNTVNDHSITGVPTFVYYKGGRRVESFSGARADMLESLI 145
|