DK960135
Clone id TST39A01NGRL0006_J13
Library
Length 671
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_J13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGGCTTCGGCCATACTGGCCGCCTATCGCGGTTGATCCTCTACAGCCGCCTGACCTGCAG
GATCCATCTCTCATCACTCATAGTCACATCACAGTATACTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCCCCGCCCCACTCCCCACACACACACACACACACACACACACACACACCG
GTCAATACTAATTCATGCTGCAATCTTCCTCACCAATCTTCAGTCACACCCCAATTCGCT
TGTTTATATCAGCTGATATCTGCTAGTCTCTCTGAGTAGTAGCTCTTATGCTTTTACGCT
TAAAAGAATGCATGGAGGCCTTGGTTGCAGTGATATCGTCCCTCCGCCGCTGCGAATGTT
GGACGTCCCCGCAGCCTATCTTACCCATGCCGATGGCCAATTCTCAGATCAATACACCGC
TCATGGCTTTCTTGCACCTTCAGGAAGGCTGCTAACTCTGGAGGAACGCTGTCTAGGGTT
GGCAAAGCCTGAGGCAATTGACAGTAGTACGGGGGGTGATCAGCAATCCGCTGTGACTAA
CATGTCCAACATAACATCAGCGTCGGGCGAGGCGAGTGGATCGTCGGGAGAAAGGGATGC
GAACATCAACGGCGTGGGCGGCGGCTCAGCACAGCAGCCAATCTCAAGTGCTGCAACTAG
TGGGGGTGGTC
■■Homology search results ■■ -
sp_hit_id A7MPE8
Definition sp|A7MPE8|FMT_ENTS8 Methionyl-tRNA formyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894)
Align length 71
Score (bit) 30.4
E-value 8.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960135|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_J13, 5'
(671 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7MPE8|FMT_ENTS8 Methionyl-tRNA formyltransferase OS=Enteroba... 30 8.8

>sp|A7MPE8|FMT_ENTS8 Methionyl-tRNA formyltransferase
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fmt
PE=3 SV=1
Length = 315

Score = 30.4 bits (67), Expect = 8.8
Identities = 24/71 (33%), Positives = 30/71 (42%)
Frame = +2

Query: 296 TLKRMHGGLGCSDIVPPPLRMLDVPAAYLTHADGQFSDQYTAHGFLAPSGRLLTLEERCL 475
T+ +M GL D+ LR L P AD + Y L P G L TLE+
Sbjct: 138 TIMQMDKGLDTGDM----LRKLSCPIT----ADDTSASLYDKLAQLGPQGLLATLEDLAA 189

Query: 476 GLAKPEAIDSS 508
G A PE D +
Sbjct: 190 GRAVPEKQDDA 200


tr_hit_id B3N997
Definition tr|B3N997|B3N997_DROER GG23327 OS=Drosophila erecta
Align length 56
Score (bit) 35.4
E-value 3.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960135|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_J13, 5'
(671 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3N997|B3N997_DROER GG23327 OS=Drosophila erecta GN=GG23327 P... 35 3.3
tr|Q8JMF0|Q8JMF0_9ABAC Putative ORF1629-like protein OS=Mamestra... 34 9.5
tr|B4P281|B4P281_DROYA GE19171 OS=Drosophila yakuba GN=GE19171 P... 34 9.5

>tr|B3N997|B3N997_DROER GG23327 OS=Drosophila erecta GN=GG23327 PE=4
SV=1
Length = 1341

Score = 35.4 bits (80), Expect = 3.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2

Query: 503 SSTGGDQQSAVTNMSNITXXXXXXXXXXXXRDANINGVGGGSAQQPISSAATSGGG 670
S G Q+ V+N +N+T N+ GVGGG +Q +SS GG
Sbjct: 888 SGQAGANQAVVSNNNNVTGSSSVSNVTAGVASGNVAGVGGGVSQSGVSSGVGVAGG 943


>tr|Q8JMF0|Q8JMF0_9ABAC Putative ORF1629-like protein OS=Mamestra
configurata NPV-B PE=4 SV=1
Length = 512

Score = 33.9 bits (76), Expect = 9.5
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -1

Query: 602 SHPFLPTIHSPRPTLMLCWTC*SQRIADHPPYYCQLPQALPTLDSVPPELAA 447
SH LPT S PTL + + ++ PP LP PTL VPP L A
Sbjct: 211 SHSALPTSASALPTLPVTPSTLPVTVSTLPPEPLTLPPVPPTLPPVPPPLPA 262


>tr|B4P281|B4P281_DROYA GE19171 OS=Drosophila yakuba GN=GE19171 PE=4
SV=1
Length = 1342

Score = 33.9 bits (76), Expect = 9.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2

Query: 503 SSTGGDQQSAVTNMSNITXXXXXXXXXXXXRDANINGVGGGSAQQPISSAATSGGG 670
S G Q+ V+N +N+T N+ GVGGG +Q +S GG
Sbjct: 889 SGQAGANQAVVSNNNNVTGSSSVSNVTAGVASGNVAGVGGGVSQSGVSGGVGVAGG 944