DK960137
Clone id TST39A01NGRL0006_J15
Library
Length 638
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_J15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGGTCGTCTCCTTCCTTCTCCATTTCTCCTCTTTCGTCTGCTGCAGCTACGCTCTCTGCT
TGCTCTTCTTTCCTCTTCTCCTGCTTCTTCGTTGTCTTCTTCTTGTTTCTTCTTCTTGCC
TGCTTGCTTGTAGCTATCTTCTGCTTCTTTCCTCAGTTCTTCGTTTCTGTTGTTCTTCTG
TCTACTACAATGTTGTCCTTGCCTTTCACAATGGCCGATTTTCAGATCCCTGTGGATGCT
GCGAACCCCGACTAAGGCACTCTCCATCGTCGAAGCTCTGAATTGTATATAATCATAGGT
CTCACGCTCAGCAACAATTCCAGATTTTTCAGCATCATCCATTCTTTATTTGAGTACAGG
ATAGTCAACTGTGCTCTTTTCACATATTGGTCCGGCTCCCTTACTGGGGGATTTCGTTAC
ACACCTGCATGCGTGGACAGCTTTAGATTTTGGAACAGGACGTCTGTGGTCGCACTTTTG
TTGTCAACTTGCTGGAATGGAGATTCTCAGTGATCTACACTCAAACAAATTACTGCCCTT
TGAGTTTTCAGAGCCAGGTCCTCACTACCGATTAAATGAGCTGAAGGAAAATACCTGGCA
GTCAGCATTTACACAGGTCATTGAACCTCAAGTAGCTA
■■Homology search results ■■ -
sp_hit_id P45365
Definition sp|P45365|YPH5_THIVI Uncharacterized 76.5 kDa protein in phbC 3'region OS=Thiocystis violacea
Align length 43
Score (bit) 31.6
E-value 3.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960137|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_J15, 5'
(638 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P45365|YPH5_THIVI Uncharacterized 76.5 kDa protein in phbC 3'... 32 3.6
sp|Q8WY22|BRI3B_HUMAN BRI3-binding protein OS=Homo sapiens GN=BR... 32 3.6
sp|Q7VRF7|YGFZ_BLOFL tRNA-modifying protein ygfZ OS=Blochmannia ... 30 8.1

>sp|P45365|YPH5_THIVI Uncharacterized 76.5 kDa protein in phbC
3'region OS=Thiocystis violacea PE=3 SV=1
Length = 692

Score = 31.6 bits (70), Expect = 3.6
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = -3

Query: 345 RMDDAEKSGIVAERETYDYIQFRASTMESALVGVRSIHRDLKI 217
RMDD + G++A+RET ++ AST+ L G++ RD+K+
Sbjct: 346 RMDDF-RYGLLAKRETLSKLEALASTLCQQLSGLKPQDRDIKL 387


>sp|Q8WY22|BRI3B_HUMAN BRI3-binding protein OS=Homo sapiens
GN=BRI3BP PE=1 SV=1
Length = 251

Score = 31.6 bits (70), Expect = 3.6
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1

Query: 259 TLHRRSSELYIIIGLTLSNNSRFFSIIHSLFE----YRIVNCALFTYWSGSLTGGFRYTP 426
TL + +EL ++GL +SN S++FS +V L YW SLT GF ++
Sbjct: 90 TLWKVWTELLDVLGLDVSNLSQYFSPASVSSSPARALLLVGVVLLAYWFLSLTLGFTFSV 149

Query: 427 ACVDSFRFWNRTSVVALLLS 486
V RF+ VV +S
Sbjct: 150 LHVVFGRFFWIVRVVLFSMS 169


>sp|Q7VRF7|YGFZ_BLOFL tRNA-modifying protein ygfZ OS=Blochmannia
floridanus GN=Bfl260 PE=3 SV=1
Length = 336

Score = 30.4 bits (67), Expect = 8.1
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Frame = +2

Query: 428 HAWTALDFGTGRLWSHFCC------QLAGMEILSDLHSNK--LLPFEFSEPGPHYRLN-- 577
H WTALD G + F Q A M+IL + NK + E HY+LN
Sbjct: 191 HQWTALDIEAGYPYIDFATSELFFPQAANMDILQGISFNKGCYIGQELVARIQHYKLNKQ 250

Query: 578 ---ELKENTWQSAFTQV 619
+L NT+ + Q+
Sbjct: 251 SLYQLTSNTYHNQHNQL 267


tr_hit_id Q752D9
Definition tr|Q752D9|Q752D9_ASHGO AFR637Wp OS=Ashbya gossypii
Align length 64
Score (bit) 36.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960137|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_J15, 5'
(638 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q752D9|Q752D9_ASHGO AFR637Wp OS=Ashbya gossypii GN=AFR637W PE... 37 1.3
tr|Q4DLF4|Q4DLF4_TRYCR Putative uncharacterized protein OS=Trypa... 35 5.0
tr|B2HJW0|B2HJW0_MYCMM Putative uncharacterized protein OS=Mycob... 34 6.5
tr|Q4Y8X4|Q4Y8X4_PLACH Putative uncharacterized protein (Fragmen... 34 6.5

>tr|Q752D9|Q752D9_ASHGO AFR637Wp OS=Ashbya gossypii GN=AFR637W PE=4
SV=1
Length = 1296

Score = 36.6 bits (83), Expect = 1.3
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = -3

Query: 306 RETYDYIQFRASTMESALVGVRSIHRDLKIGHCERQGQHCSRQ--KNNRNEELRKEAEDS 133
+ETY +F A +ES LVGV++ I C+ + Q + N EEL +E+E+S
Sbjct: 587 KETYSEKEFTAKNIESDLVGVKT-----AISECKEKLQMAMPEDCTNEEYEELVQESEES 641

Query: 132 YKQA 121
YK A
Sbjct: 642 YKVA 645


>tr|Q4DLF4|Q4DLF4_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053510747.80 PE=4 SV=1
Length = 421

Score = 34.7 bits (78), Expect = 5.0
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Frame = -3

Query: 336 DAEKSGIVAERET-----YDYIQFRASTMESALVGVRSIH---RDLKIGHCERQGQHCSR 181
D + +V +RET + Y++FR+ S + VR H R+++I H ++ + S
Sbjct: 271 DVRRVRLVRDRETGSCKGFGYVEFRSPASVSRAIAVRGSHLNGREMRIVHVQK-SRAVSA 329

Query: 180 QKNNRNEELRKEAEDSYKQAGKKKKQ 103
K +R E+ ++EA+ + + +K+
Sbjct: 330 TKPSRREKRKREAQTAAGRGQNDEKK 355


>tr|B2HJW0|B2HJW0_MYCMM Putative uncharacterized protein
OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
GN=MMAR_3483 PE=4 SV=1
Length = 680

Score = 34.3 bits (77), Expect = 6.5
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3

Query: 399 GAGPICEKSTVDYPVLK*R--MDDAEKSGIVAERETYDYIQFRASTMESALVGVRSI 235
GAGP CE+ ++ V R +D A + G++AE E + Y Q A T+ +A V R++
Sbjct: 424 GAGPSCERQAIEQLVDTQRNALDYARRDGLIAEDEAF-YAQQNAQTVRNAEVYYRAM 479


>tr|Q4Y8X4|Q4Y8X4_PLACH Putative uncharacterized protein (Fragment)
OS=Plasmodium chabaudi GN=PC000071.00.0 PE=4 SV=1
Length = 921

Score = 34.3 bits (77), Expect = 6.5
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = -3

Query: 477 KCDHRRPVPKSKAVHACRCVTKSPSKGAGPIC--EKSTVDYPVLK*RMDDAEKSGIVAE- 307
+C + K + C+C+ +SP+K PIC ++S DY L + +K +
Sbjct: 546 QCPKNKKCVVEKGKNVCKCINRSPNKKGKPICYDKESDDDYDALYASKNKCKKKEYMNMC 605

Query: 306 RETYDYIQFRASTMESALVGVRSIHRDLKIGHCERQGQHCSRQKNNRNEE 157
+ + + +T +++ R K CE G++C+ NEE
Sbjct: 606 NKNKEICVYDINTDKASCECKPHFTRSSKTNECE-PGEYCNNVVCKTNEE 654