DK960145 |
Clone id |
TST39A01NGRL0006_J23 |
Library |
TST39 |
Length |
666 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_J23. 5' end sequence. |
Accession |
DK960145 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1617Contig1 |
Sequence |
AGCGATATCACGACGATGGTGAAGAAGAGCAAAAAGAGCAAGAGCAAGCGAGTGCCTTTG CGCAAGAAGTACAAGATTCTGAAGAAAGTGAAGGAGCACCACAAAAAGAAAGCCAAAGAG GCTAAAAAACTCGGCAAACGCAAGCAGCCAGTGACGAAGGATCCTGGCATTCCCAATGCA TGGCCCTTTAAAGAGCAGGAGCTGCAAGCTCTTGAAGCGCGGCGCGCTCGAGCTCTTGAG GAGATGGAGCTGAAAAAGCAGGCAAAGAAAGAAAGGGCTGAGAAACGAAAGCTCGGGTTG ATCAGTGAAGGAGAACCAGGCCTTACTGATCTGGCTCAAACGGCAGCTAGTCAAAGCTTA GAGTTTGATAAAAAGAGCAAGCCCAACAAGGATGGCACGATCACTCATGATGGTTCTCAA CGGTCCTTTTATAGAGAGCTGGTCAAGGTGATCGAAGCATCAGATGTCATAATTGAAGTT CTGGACGCCAGAGATCCTCTGGGAAGCAGATGTAAAGATATTGAAAGGCTTGTAGTGACG GCTGTTCCAACAAAGCATTTGATTCTGTTGCTAAATAAGATTGATTTGGTCCCCAAAGAA GTTGCAGAGAAGTGGCTCAATTATTTAAGGGAGGAGCTTCCAAGCGTGGCCTTCAAATGC AGCACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54KS4 |
Definition |
sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum |
Align length |
177 |
Score (bit) |
117.0 |
E-value |
6.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNF4 |
Definition |
tr|B8LNF4|B8LNF4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
176 |
Score (bit) |
165.0 |
E-value |
2.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960145|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_J23, 5' (666 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNF4|B8LNF4_PICSI Putative uncharacterized protein OS=Picea... 165 2e-39 tr|B6UF30|B6UF30_MAIZE Guanine nucleotide-binding protein-like 3... 159 1e-37 tr|Q5ZCV4|Q5ZCV4_ORYSJ Putative nucleostemin (Os01g0375000 prote... 157 4e-37 tr|A7QKU4|A7QKU4_VITVI Chromosome undetermined scaffold_114, who... 157 4e-37 tr|A2ZTB0|A2ZTB0_ORYSJ Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|A2WQ59|A2WQ59_ORYSI Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|B6SHF2|B6SHF2_MAIZE Putative uncharacterized protein OS=Zea m... 157 6e-37 tr|A1X875|A1X875_SOLLC Putative nuclear GTPase OS=Solanum lycope... 152 1e-35 tr|Q9M8Z5|Q9M8Z5_ARATH Putative GTPase OS=Arabidopsis thaliana G... 147 8e-34 tr|Q93Y17|Q93Y17_ARATH Putative GTPase (Fragment) OS=Arabidopsis... 147 8e-34 tr|A9T030|A9T030_PHYPA Predicted protein (Fragment) OS=Physcomit... 135 2e-30 tr|A9SLN4|A9SLN4_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 5e-30 tr|A7SZ44|A7SZ44_NEMVE Predicted protein (Fragment) OS=Nematoste... 129 2e-28 tr|A5AJL5|A5AJL5_VITVI Putative uncharacterized protein OS=Vitis... 125 2e-27 tr|A8IVS6|A8IVS6_CHLRE Predicted protein (Fragment) OS=Chlamydom... 123 9e-27 tr|A7RNM6|A7RNM6_NEMVE Predicted protein (Fragment) OS=Nematoste... 123 1e-26 tr|A4RTU2|A4RTU2_OSTLU Predicted protein OS=Ostreococcus lucimar... 120 1e-25 tr|Q94703|Q94703_PHYPO Myosin-related protein (Fragment) OS=Phys... 119 2e-25 tr|B6KXH7|B6KXH7_BRAFL Putative uncharacterized protein OS=Branc... 117 8e-25 tr|Q5PPS6|Q5PPS6_XENLA LOC496093 protein (Fragment) OS=Xenopus l... 116 1e-24 tr|A0JMT3|A0JMT3_XENLA LOC496093 protein OS=Xenopus laevis GN=gn... 116 1e-24 tr|B3RUV1|B3RUV1_TRIAD Putative uncharacterized protein (Fragmen... 114 7e-24 tr|Q017F2|Q017F2_OSTTA Putative nucleostemin (ISS) OS=Ostreococc... 113 9e-24 tr|Q05DU1|Q05DU1_HUMAN GNL3L protein (Fragment) OS=Homo sapiens ... 113 9e-24 tr|A8MX10|A8MX10_HUMAN Putative uncharacterized protein GNL3L OS... 113 9e-24 tr|Q4SR54|Q4SR54_TETNG Chromosome 11 SCAF14528, whole genome sho... 112 2e-23 tr|Q7SZX9|Q7SZX9_DANRE FLJ10613-like OS=Danio rerio GN=gnl3l PE=... 107 5e-22 tr|Q6DBQ5|Q6DBQ5_DANRE Gnl3l protein (Fragment) OS=Danio rerio G... 107 5e-22 tr|Q58EC7|Q58EC7_DANRE Guanine nucleotide binding protein-like 3... 107 5e-22 tr|A9V4J2|A9V4J2_MONBE Predicted protein OS=Monosiga brevicollis... 105 3e-21
>tr|B8LNF4|B8LNF4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 606
Score = 165 bits (418), Expect = 2e-39 Identities = 90/176 (51%), Positives = 113/176 (64%), Gaps = 4/176 (2%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ E + L Sbjct: 47 VEKDPGIPNDWPFKEQELQALEARRARALEEMEQKKELRKERAQKRKLGLLEE-DADLKQ 105
Query: 331 LAQTAASQSLEFDKKS----KPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDP 498 LA + +++ +F KKS ++DGTI HD S R+FY+ELVKVIE SDVI+EVLDARDP Sbjct: 106 LANSISNRQDDFAKKSLSSRDASRDGTI-HDRSDRAFYKELVKVIETSDVILEVLDARDP 164
Query: 499 LGSRCKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 LG+RC D+ER+V+ A P K L+LL+NKIDLVP+E+AEKWL YLREELP++AFKC+T Sbjct: 165 LGTRCTDMERMVLRAGPEKRLVLLINKIDLVPREIAEKWLKYLREELPTIAFKCNT 220
>tr|B6UF30|B6UF30_MAIZE Guanine nucleotide-binding protein-like 3 OS=Zea mays PE=2 SV=1 Length = 592
Score = 159 bits (403), Expect = 1e-37 Identities = 87/176 (49%), Positives = 108/176 (61%), Gaps = 4/176 (2%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + E + + Sbjct: 48 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDEE--IAN 105
Query: 331 LAQTAASQSLEFDKKSKPNKDGTIT----HDGSQRSFYRELVKVIEASDVIIEVLDARDP 498 LA A++Q EF K +T +D S+RSFY+ELVKVIEASDVI+EVLDARDP Sbjct: 106 LASAASAQGSEFAAKDAAKDKAPLTVAKSNDHSERSFYKELVKVIEASDVILEVLDARDP 165
Query: 499 LGSRCKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 LG+RC D+E++V A P+K ++LLLNKIDLVPKE EKWL YLREE+P+VAFKC+T Sbjct: 166 LGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKEAVEKWLTYLREEMPTVAFKCNT 221
>tr|Q5ZCV4|Q5ZCV4_ORYSJ Putative nucleostemin (Os01g0375000 protein) OS=Oryza sativa subsp. japonica GN=B1111C09.2 PE=4 SV=1 Length = 591
Score = 157 bits (398), Expect = 4e-37 Identities = 84/176 (47%), Positives = 111/176 (63%), Gaps = 4/176 (2%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + + + Sbjct: 47 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDED--IAN 104
Query: 331 LAQTAASQSLEFDKKSKPNKDGTI----THDGSQRSFYRELVKVIEASDVIIEVLDARDP 498 LA A++Q EF +K ++ ++ + D S+R+FY+ELVKVIEASDVI+EVLDARDP Sbjct: 105 LASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDP 164
Query: 499 LGSRCKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 LG+RC D+E++V A P+K ++LLLNKIDLVPKE EKWL YLREE+P+VAFKC+T Sbjct: 165 LGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKESVEKWLTYLREEMPTVAFKCNT 220
>tr|A7QKU4|A7QKU4_VITVI Chromosome undetermined scaffold_114, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001280001 PE=3 SV=1 Length = 587
Score = 157 bits (398), Expect = 4e-37 Identities = 83/172 (48%), Positives = 109/172 (63%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + ++ Sbjct: 47 VEKDPGIPNDWPFKEQELKALEARRARALEELEQKKAARKERAQKRKLGLLKDDD--MSK 104
Query: 331 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 510 LA A+++ +F+ +G +T + S R+FY+ELV+VIEASDVI+EVLDARDPLG+R Sbjct: 105 LADMASAKEQDFE-------EGKVTLNNSDRAFYKELVEVIEASDVILEVLDARDPLGTR 157
Query: 511 CKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 C D+E++V+ + P KHL+LLLNKIDLVP+E EKWL YLREELP+VAFKCST Sbjct: 158 CVDMEKMVMRSGPNKHLVLLLNKIDLVPREAVEKWLKYLREELPAVAFKCST 209
>tr|A2ZTB0|A2ZTB0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001782 PE=4 SV=1 Length = 740
Score = 157 bits (398), Expect = 4e-37 Identities = 84/176 (47%), Positives = 111/176 (63%), Gaps = 4/176 (2%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + + + Sbjct: 196 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDED--IAN 253
Query: 331 LAQTAASQSLEFDKKSKPNKDGTI----THDGSQRSFYRELVKVIEASDVIIEVLDARDP 498 LA A++Q EF +K ++ ++ + D S+R+FY+ELVKVIEASDVI+EVLDARDP Sbjct: 254 LASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDP 313
Query: 499 LGSRCKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 LG+RC D+E++V A P+K ++LLLNKIDLVPKE EKWL YLREE+P+VAFKC+T Sbjct: 314 LGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKESVEKWLTYLREEMPTVAFKCNT 369
>tr|A2WQ59|A2WQ59_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01991 PE=4 SV=1 Length = 591
Score = 157 bits (398), Expect = 4e-37 Identities = 84/176 (47%), Positives = 111/176 (63%), Gaps = 4/176 (2%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + + + Sbjct: 47 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDED--IAN 104
Query: 331 LAQTAASQSLEFDKKSKPNKDGTI----THDGSQRSFYRELVKVIEASDVIIEVLDARDP 498 LA A++Q EF +K ++ ++ + D S+R+FY+ELVKVIEASDVI+EVLDARDP Sbjct: 105 LASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDP 164
Query: 499 LGSRCKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 LG+RC D+E++V A P+K ++LLLNKIDLVPKE EKWL YLREE+P+VAFKC+T Sbjct: 165 LGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKESVEKWLTYLREEMPTVAFKCNT 220
>tr|B6SHF2|B6SHF2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 594
Score = 157 bits (397), Expect = 6e-37 Identities = 86/172 (50%), Positives = 105/172 (61%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + + Sbjct: 48 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKQARKERAQKRKAGLLEDED--IAS 105
Query: 331 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 510 LA A++Q EF K +D S+RSFY+ELVKVIEASDVI+EVLDARDPLG+R Sbjct: 106 LASAASAQGSEFAAKENAPLLVAKINDHSERSFYKELVKVIEASDVIMEVLDARDPLGTR 165
Query: 511 CKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 C D+E++V A P+K ++LLLNKIDLVPKE EKWL YLREELP+VAFKC+T Sbjct: 166 CIDMEKMVRKADPSKRIVLLLNKIDLVPKEAVEKWLTYLREELPTVAFKCNT 217
>tr|A1X875|A1X875_SOLLC Putative nuclear GTPase OS=Solanum lycopersicum PE=2 SV=1 Length = 609
Score = 152 bits (385), Expect = 1e-35 Identities = 80/172 (46%), Positives = 103/172 (59%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + + Sbjct: 47 VEKDPGIPNDWPFKEQELKALEARRARALDELEQKKVARKERAKKRKLGLLEDDDVSKLE 106
Query: 331 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 510 + + + + + + D S+R+FY+ELVKVI+ASDVI+EVLDARDPLG+R Sbjct: 107 GLTSTKEKEVGGGRVNDGSASFVKQRDNSERAFYKELVKVIDASDVILEVLDARDPLGTR 166
Query: 511 CKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 C D+E++V+ A P KHL+LLLNKIDLVP+E AEKWL YLREELP+VAFKCST Sbjct: 167 CLDMEKMVMRAGPEKHLVLLLNKIDLVPREAAEKWLKYLREELPTVAFKCST 218
>tr|Q9M8Z5|Q9M8Z5_ARATH Putative GTPase OS=Arabidopsis thaliana GN=At3g07050 PE=3 SV=1 Length = 582
Score = 147 bits (370), Expect = 8e-34 Identities = 83/172 (48%), Positives = 100/172 (58%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + Sbjct: 47 VEKDPGIPNDWPFKEQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVDDEDT---- 102
Query: 331 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 510 +++E D N D S+R+FY+ELVKVIE SDVI+EVLDARDPLG+R Sbjct: 103 ---KTEGETIE-DLPKVVN-----VRDNSERAFYKELVKVIELSDVILEVLDARDPLGTR 153
Query: 511 CKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 C D+ER+V+ A P KHL+LLLNKIDLVP+E AEKWL YLREE P+VAFKCST Sbjct: 154 CTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEKWLMYLREEFPAVAFKCST 205
>tr|Q93Y17|Q93Y17_ARATH Putative GTPase (Fragment) OS=Arabidopsis thaliana GN=At3g07050/F17A9.21 PE=2 SV=1 Length = 497
Score = 147 bits (370), Expect = 8e-34 Identities = 83/172 (48%), Positives = 100/172 (58%) Frame = +1
Query: 151 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 330 V KDPGIPN WPFK GL+ + + Sbjct: 13 VEKDPGIPNDWPFKEQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVDDEDT---- 68
Query: 331 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 510 +++E D N D S+R+FY+ELVKVIE SDVI+EVLDARDPLG+R Sbjct: 69 ---KTEGETIE-DLPKVVN-----VRDNSERAFYKELVKVIELSDVILEVLDARDPLGTR 119
Query: 511 CKDIERLVVTAVPTKHLILLLNKIDLVPKEVAEKWLNYLREELPSVAFKCST 666 C D+ER+V+ A P KHL+LLLNKIDLVP+E AEKWL YLREE P+VAFKCST Sbjct: 120 CTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEKWLMYLREEFPAVAFKCST 171
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