DK960148 |
Clone id |
TST39A01NGRL0006_K02 |
Library |
TST39 |
Length |
614 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_K02. 5' end sequence. |
Accession |
DK960148 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AAAAATTAAAGGATTTTTTTTCTTTTTTTTGTGTTGAAGATAACAAATCAGTACTGCCTG CAGGGATCGAAATTCCCGTCACGTGGGGGCGCTCTGAAACTTTGGAGAGTATCGGGCAGG ACAGTAATGATGGGGGGTAACGGCAACCAGGAGAAGGTGGCATCGGGAGGGGTGGTAATG GGTGCAGCAGGGCGATCACCCACAACCATTCGGCTGCCAGAAGCGGAAGGGCTTGTGGCA GTCCGGGGGCAGGTGATGACTGATGAACAAATGGAGACCCTACGGCGCCAGATCTCTGTT TATGCTACTATCTGCCATCAGCTTGTAGAGATGCACAAGGCCACCATGGCTCAGCAGCAT GCCCTCTCAGGCTTGAAGTATGGCCATACAAGCCCCCTTGATTCAGCCTTAAACTCAATG GGTCAAAAGTTTGCATCAAGGCAAAGGTGGACGCCCAGCCAAACACAGCTTCAGATACTG GAGAAGCTTTTCCAGCAAGGGAATGGAGCTCCGAGCAAGCAGAGGATAAAAGAGATCAGC ATAGAATTGAGCCAGTACGGGCAGATCTCTGAAACGAATGTGTACAATTGGTTCCAAAAC CGACGAGCAAGAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5QMM3 |
Definition |
sp|Q5QMM3|WOX8_ORYSJ WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica |
Align length |
121 |
Score (bit) |
163.0 |
E-value |
7.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TGC7 |
Definition |
tr|A9TGC7|A9TGC7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
121 |
Score (bit) |
167.0 |
E-value |
3.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960148|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_K02, 5' (584 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TGC7|A9TGC7_PHYPA Predicted protein (Fragment) OS=Physcomit... 167 3e-40 tr|A7QPD1|A7QPD1_VITVI Chromosome chr18 scaffold_137, whole geno... 165 2e-39 tr|A5C8U8|A5C8U8_VITVI Putative uncharacterized protein OS=Vitis... 163 6e-39 tr|B8ABA9|B8ABA9_ORYSI Putative uncharacterized protein OS=Oryza... 163 7e-39 tr|B7EF33|B7EF33_ORYSJ cDNA clone:J013151P17, full insert sequen... 163 7e-39 tr|A2ZZ07|A2ZZ07_ORYSJ Putative uncharacterized protein OS=Oryza... 163 7e-39 tr|B7FKF0|B7FKF0_MEDTR Putative uncharacterized protein OS=Medic... 161 3e-38 tr|A9NWZ9|A9NWZ9_PICSI Putative uncharacterized protein OS=Picea... 159 8e-38 tr|Q9ZRZ4|Q9ZRZ4_9ROSI HB2 homeodomain protein (Fragment) OS=Pop... 158 2e-37 tr|Q6S3E0|Q6S3E0_POPTO Homeodomain protein HB2 (Fragment) OS=Pop... 158 2e-37 tr|B6T910|B6T910_MAIZE WUSCHEL-related homeobox 14 OS=Zea mays P... 157 4e-37 tr|A9RUD1|A9RUD1_PHYPA Predicted protein (Fragment) OS=Physcomit... 157 4e-37 tr|B4FIK7|B4FIK7_MAIZE Putative uncharacterized protein OS=Zea m... 156 9e-37 tr|A7QWM9|A7QWM9_VITVI Chromosome chr4 scaffold_205, whole genom... 154 3e-36 tr|A7QWM8|A7QWM8_VITVI Chromosome chr4 scaffold_205, whole genom... 152 2e-35 tr|Q9ZRZ5|Q9ZRZ5_9ROSI HB1 homeodomain protein OS=Populus tremul... 150 4e-35 tr|Q6S3D9|Q6S3D9_POPTO Homeodomain protein HB1 OS=Populus toment... 149 1e-34 tr|B4FN53|B4FN53_MAIZE Putative uncharacterized protein OS=Zea m... 142 2e-32 tr|A0AAU3|A0AAU3_POPTR WOX13 protein (Fragment) OS=Populus trich... 103 5e-21 tr|A0AAU4|A0AAU4_MAIZE WOX13B protein (Fragment) OS=Zea mays GN=... 100 5e-20 tr|Q2A0L2|Q2A0L2_MAIZE WOX13A protein (Fragment) OS=Zea mays GN=... 100 8e-20 tr|Q00X48|Q00X48_OSTTA HB2 homeodomain protein (ISS) OS=Ostreoco... 91 5e-17 tr|A9TEZ4|A9TEZ4_PHYPA Predicted protein OS=Physcomitrella paten... 87 7e-16 tr|A4S6F9|A4S6F9_OSTLU Predicted protein OS=Ostreococcus lucimar... 73 1e-11 tr|A8Y7X2|A8Y7X2_BRADI Putative wuschel homeobox protein (Fragme... 66 1e-09 tr|B8YI24|B8YI24_PHACN WOX9-like protein OS=Phaseolus coccineus ... 64 5e-09 tr|A9XDF7|A9XDF7_PETHY EVERGREEN OS=Petunia hybrida PE=2 SV=1 64 6e-09 tr|A9PBT6|A9PBT6_POPTR Putative uncharacterized protein OS=Popul... 64 6e-09 tr|Q00M92|Q00M92_SOYBN WOX4 protein (Fragment) OS=Glycine max PE... 64 8e-09 tr|A0AAU2|A0AAU2_POPTR WOX9 protein (Fragment) OS=Populus tricho... 64 8e-09
>tr|A9TGC7|A9TGC7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_7275 PE=3 SV=1 Length = 164
Score = 167 bits (424), Expect = 3e-40 Identities = 84/121 (69%), Positives = 99/121 (81%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 QVMT+EQ+ETLRRQISVYATIC QLVEMHKA+++QQ +L G YG +D + K Sbjct: 1 QVMTEEQLETLRRQISVYATICQQLVEMHKASVSQQASLPG--YGQIVSMDHLTGTPPHK 58
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +RQRWTPSQ QLQILEKLF+QG+G P+KQRIKEI+ ELSQ+G ISETNVYNWFQNR+A Sbjct: 59 STARQRWTPSQHQLQILEKLFEQGSGTPNKQRIKEITAELSQHGAISETNVYNWFQNRKA 118
Query: 580 R 582 R Sbjct: 119 R 119
>tr|A7QPD1|A7QPD1_VITVI Chromosome chr18 scaffold_137, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002895001 PE=3 SV=1 Length = 278
Score = 165 bits (418), Expect = 2e-39 Identities = 84/121 (69%), Positives = 98/121 (80%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQME LRRQISVYATIC QLVEMHKA QQ L+G++ G+ D + S G K Sbjct: 34 KVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQD-LAGMRLGNIY-CDPLMASAGHK 91
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +SRQRWTP+ QLQILE++F QGNG PSKQ+IKEI+ EL+Q+GQISETNVYNWFQNRRA Sbjct: 92 ISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRA 151
Query: 580 R 582 R Sbjct: 152 R 152
>tr|A5C8U8|A5C8U8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018997 PE=3 SV=1 Length = 243
Score = 163 bits (413), Expect = 6e-39 Identities = 83/119 (69%), Positives = 96/119 (80%) Frame = +1
Query: 226 MTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQKFA 405 MTDEQME LRRQISVYATIC QLVEMHKA QQ L+G++ G+ D + S G K + Sbjct: 1 MTDEQMELLRRQISVYATICEQLVEMHKAITTQQD-LAGMRLGNIY-CDPLMASAGHKIS 58
Query: 406 SRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRAR 582 SRQRWTP+ QLQILE++F QGNG PSKQ+IKEI+ EL+Q+GQISETNVYNWFQNRRAR Sbjct: 59 SRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRAR 117
>tr|B8ABA9|B8ABA9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04217 PE=4 SV=1 Length = 267
Score = 163 bits (412), Expect = 7e-39 Identities = 79/121 (65%), Positives = 97/121 (80%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQME LR+QIS+YATIC QLVEMH+A AQQ +++G++ G+ D + G K Sbjct: 28 KVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLY-CDPLMVPGGHK 86
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +RQRWTP+ QLQILE +F QGNG PSKQ+IK+I+ ELSQ+GQISETNVYNWFQNRRA Sbjct: 87 ITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRA 146
Query: 580 R 582 R Sbjct: 147 R 147
>tr|B7EF33|B7EF33_ORYSJ cDNA clone:J013151P17, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 267
Score = 163 bits (412), Expect = 7e-39 Identities = 79/121 (65%), Positives = 97/121 (80%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQME LR+QIS+YATIC QLVEMH+A AQQ +++G++ G+ D + G K Sbjct: 28 KVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLY-CDPLMVPGGHK 86
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +RQRWTP+ QLQILE +F QGNG PSKQ+IK+I+ ELSQ+GQISETNVYNWFQNRRA Sbjct: 87 ITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRA 146
Query: 580 R 582 R Sbjct: 147 R 147
>tr|A2ZZ07|A2ZZ07_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003779 PE=3 SV=1 Length = 250
Score = 163 bits (412), Expect = 7e-39 Identities = 79/121 (65%), Positives = 97/121 (80%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQME LR+QIS+YATIC QLVEMH+A AQQ +++G++ G+ D + G K Sbjct: 28 KVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLY-CDPLMVPGGHK 86
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +RQRWTP+ QLQILE +F QGNG PSKQ+IK+I+ ELSQ+GQISETNVYNWFQNRRA Sbjct: 87 ITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRA 146
Query: 580 R 582 R Sbjct: 147 R 147
>tr|B7FKF0|B7FKF0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 264
Score = 161 bits (407), Expect = 3e-38 Identities = 81/121 (66%), Positives = 98/121 (80%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQ+ETLR+QI+VYATIC QLVEMHK AQQ L+G++ G+ +L + G K Sbjct: 23 KVMTDEQLETLRKQIAVYATICEQLVEMHKTLSAQQD-LAGVRLGNL--YCDSLMTAGHK 79
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 SRQRWTP+ QLQILE++F QGNG PSK++IKEI+ ELSQ+GQISETNVYNWFQNRRA Sbjct: 80 ITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQNRRA 139
Query: 580 R 582 R Sbjct: 140 R 140
>tr|A9NWZ9|A9NWZ9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 367
Score = 159 bits (403), Expect = 8e-38 Identities = 82/122 (67%), Positives = 97/122 (79%), Gaps = 1/122 (0%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQ-HALSGLKYGHTSPLDSALNSMGQ 396 QVMTDEQMETLRRQI VY+TIC QLVEMH+A QQ ++ L G D A + G Sbjct: 22 QVMTDEQMETLRRQICVYSTICSQLVEMHRAMSQQQPSSVPTLLMGQHMLYDLAQGNPGF 81
Query: 397 KFASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRR 576 + ++RQRWTPSQTQLQILE LF+QG+ PSKQ+IKEI++ELSQ+GQISETNVYNWFQNR+ Sbjct: 82 RASARQRWTPSQTQLQILENLFEQGHATPSKQKIKEITMELSQHGQISETNVYNWFQNRK 141
Query: 577 AR 582 AR Sbjct: 142 AR 143
>tr|Q9ZRZ4|Q9ZRZ4_9ROSI HB2 homeodomain protein (Fragment) OS=Populus tremula x Populus tremuloides GN=HB2 PE=2 SV=1 Length = 261
Score = 158 bits (400), Expect = 2e-37 Identities = 81/121 (66%), Positives = 96/121 (79%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQ+ETLR+QI+VYA IC QLVEMHK AQQ L+G + G+ D + S G K Sbjct: 56 KVMTDEQLETLRKQIAVYAAICEQLVEMHKTLSAQQD-LAGGRLGNLY-CDPLMASGGHK 113
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +RQRWTP+ QLQILE++F QGNG PSKQ+IKEI+ ELSQ+GQISETNVYNWFQNRRA Sbjct: 114 ITARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRA 173
Query: 580 R 582 R Sbjct: 174 R 174
>tr|Q6S3E0|Q6S3E0_POPTO Homeodomain protein HB2 (Fragment) OS=Populus tomentosa GN=HB2 PE=2 SV=1 Length = 257
Score = 158 bits (400), Expect = 2e-37 Identities = 81/121 (66%), Positives = 96/121 (79%) Frame = +1
Query: 220 QVMTDEQMETLRRQISVYATICHQLVEMHKATMAQQHALSGLKYGHTSPLDSALNSMGQK 399 +VMTDEQ+ETLR+QI+VYA IC QLVEMHK AQQ L+G + G+ D + S G K Sbjct: 52 KVMTDEQLETLRKQIAVYAAICEQLVEMHKTLSAQQD-LAGGRLGNLY-CDPLMASGGHK 109
Query: 400 FASRQRWTPSQTQLQILEKLFQQGNGAPSKQRIKEISIELSQYGQISETNVYNWFQNRRA 579 +RQRWTP+ QLQILE++F QGNG PSKQ+IKEI+ ELSQ+GQISETNVYNWFQNRRA Sbjct: 110 ITARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRA 169
Query: 580 R 582 R Sbjct: 170 R 170
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