DK960149 |
Clone id |
TST39A01NGRL0006_K03 |
Library |
TST39 |
Length |
693 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_K03. 5' end sequence. |
Accession |
DK960149 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1656Contig1 |
Sequence |
TTCAGTTCCATCCTTTAGATCCTGGGCACTTCATTAGTGGTTCATTGGATGGAAAAGTAC GCATATGGTGCATTCAAGAACCACAAGTAATTGATTGGGTTGACTTGCAAGAGATGGTGA CAGCAGCTTGTTATACTCCAAATGGACAGGGAGCAGTTGTGGGCTCATACAAGGGGACTT GTCGCTTCTACAAGACACCAGGAAACAAGCTGCAACTTGACACCACTTTTGAAGTACGTG ACCCTAAAACCAAGCGGTCTCAAGGGAAAAAAATTACTGGCTTCCAGTTTGTTCCTGGTG ACAAAATGAAGATTTTGATTACTTCAAATGACTCACGTATTAGGGTATATAATGGCACCG AGATCGGCTCCAAGTTCAAAGGTTTCCGGAACAGCAAGAGTCATATTTCAGCGTCATTCA GCAGAAATGGGAGGTTTATTGTTTCTGCAAGCGAGGATTCCCGTGTTTGCATTTGGAGCT TTAATGATTCCAGCTACGATTACCCAGATGTGCAGAGGACAAATTCAGGGGCCTACGAGG ACTTCTCTGTTAAGCATGTTTTGGTGGCAGTTCCTTGGCCAGGACCTAGCAGTCGGCCAA TTCACGTCATCTCAGGAGACTCTCATATAGGCGAGTCTGCAGCAACACACGTGACAACAA ACATGTCCTCTAGCAAAGAGAGATCATTGTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XSC3 |
Definition |
sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44 OS=Bos taurus |
Align length |
202 |
Score (bit) |
142.0 |
E-value |
1.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960149|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_K03, 5' (693 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44 OS=Bos tau... 142 1e-33 sp|Q9R037|WDR44_RAT WD repeat-containing protein 44 OS=Rattus no... 142 2e-33 sp|Q6NVE8|WDR44_MOUSE WD repeat-containing protein 44 OS=Mus mus... 142 2e-33 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sa... 142 2e-33 sp|Q498F0|WDR44_XENLA WD repeat-containing protein 44 OS=Xenopus... 141 4e-33 sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protei... 129 1e-29 sp|O60136|YNS5_SCHPO Uncharacterized WD repeat-containing protei... 94 9e-19 sp|Q03177|YMZ2_YEAST WD repeat-containing protein YMR102C OS=Sac... 76 2e-13 sp|P32330|YKM1_YEAST WD repeat-containing protein YKL121W OS=Sac... 64 1e-09 sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protei... 59 2e-08 sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protei... 57 9e-08 sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=D... 56 2e-07 sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melano... 55 3e-07 sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus mus... 55 3e-07 sp|Q6NRT3|SMU1_XENLA WD40 repeat-containing protein SMU1 OS=Xeno... 55 3e-07 sp|Q99M63|SMU1_RAT WD40 repeat-containing protein SMU1 OS=Rattus... 55 3e-07 sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus ... 55 3e-07 sp|Q2TAY7|SMU1_HUMAN WD40 repeat-containing protein SMU1 OS=Homo... 55 3e-07 sp|Q76B40|SMU1_CRIGR WD40 repeat-containing protein SMU1 OS=Cric... 55 3e-07 sp|Q2TBS9|SMU1_BOVIN WD40 repeat-containing protein SMU1 OS=Bos ... 55 3e-07 sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus mus... 55 4e-07 sp|Q6UXN9|WDR82_HUMAN WD repeat-containing protein 82 OS=Homo sa... 55 4e-07 sp|Q6NV31|WDR82_DANRE WD repeat-containing protein 82 OS=Danio r... 55 4e-07 sp|Q5ZME8|SMU1_CHICK WD40 repeat-containing protein SMU1 OS=Gall... 55 4e-07 sp|Q6P4J8|SMU1_XENTR WD40 repeat-containing protein SMU1 OS=Xeno... 55 5e-07 sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Ca... 54 6e-07 sp|Q5ZMV7|WDR82_CHICK WD repeat-containing protein 82 OS=Gallus ... 54 1e-06 sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Ca... 51 7e-06 sp|Q58E77|WD82B_XENLA WD repeat-containing protein 82-B OS=Xenop... 50 1e-05 sp|Q6GL39|WDR82_XENTR WD repeat-containing protein 82 OS=Xenopus... 49 3e-05
>sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1 Length = 912
Score = 142 bits (359), Expect = 1e-33 Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQ---EMVTAACYTPNGQGAVVGSYKG 176 FHP D +F+SGSLDGK+R+W I + +V W ++ +++TAA + NG+ AV+G+Y G Sbjct: 654 FHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDG 713
Query: 177 TCRFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYN- 353 C FY T L+ T VR + + G+KITG + +PG+ KIL+TSNDSRIR+Y+ Sbjct: 714 RCIFYDT--EHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDL 770
Query: 354 -GTEIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSG 530 + K+KG+ NS S I ASFS + ++VS SED V IWS + V+R + Sbjct: 771 RDLSLSMKYKGYVNSSSQIKASFSHDFNYLVSGSEDKYVYIWSTYHDLSKFTSVRRDRND 830
Query: 531 AYEDFSVKHVLV--AVPWPGPS 590 +E + +V A+ P PS Sbjct: 831 FWEGIKAHNAVVTSAIFAPNPS 852
>sp|Q9R037|WDR44_RAT WD repeat-containing protein 44 OS=Rattus norvegicus GN=Wdr44 PE=1 SV=1 Length = 908
Score = 142 bits (358), Expect = 2e-33 Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQ---EMVTAACYTPNGQGAVVGSYKG 176 FHP D +F+SGSLDGK+R+W I + +V W ++ +++TAA + NG+ AV+G+Y G Sbjct: 650 FHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDG 709
Query: 177 TCRFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYN- 353 C FY T L+ T VR + + G+KITG + +PG+ KIL+TSNDSRIR+Y+ Sbjct: 710 RCIFYDT--EHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDL 766
Query: 354 -GTEIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSG 530 + K+KG+ NS S I ASFS + ++VS SED V IWS + V+R + Sbjct: 767 RDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWSTYHDLSKFTSVRRDRND 826
Query: 531 AYEDFSVKHVLV--AVPWPGPS 590 +E + +V A+ P PS Sbjct: 827 FWEGIKAHNAVVTSAIFAPNPS 848
>sp|Q6NVE8|WDR44_MOUSE WD repeat-containing protein 44 OS=Mus musculus GN=Wdr44 PE=1 SV=1 Length = 915
Score = 142 bits (358), Expect = 2e-33 Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQ---EMVTAACYTPNGQGAVVGSYKG 176 FHP D +F+SGSLDGK+R+W I + +V W ++ +++TAA + NG+ AV+G+Y G Sbjct: 657 FHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDG 716
Query: 177 TCRFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYN- 353 C FY T L+ T VR + + G+KITG + +PG+ KIL+TSNDSRIR+Y+ Sbjct: 717 RCIFYDT--EHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDL 773
Query: 354 -GTEIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSG 530 + K+KG+ NS S I ASFS + ++VS SED V IWS + V+R + Sbjct: 774 RDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWSTYHDLSKFTSVRRDRND 833
Query: 531 AYEDFSVKHVLV--AVPWPGPS 590 +E + +V A+ P PS Sbjct: 834 FWEGIKAHNAVVTSAIFAPNPS 855
>sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 Length = 913
Score = 142 bits (358), Expect = 2e-33 Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQ---EMVTAACYTPNGQGAVVGSYKG 176 FHP D +F+SGSLDGK+R+W I + +V W ++ +++TAA + NG+ AV+G+Y G Sbjct: 655 FHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDG 714
Query: 177 TCRFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYN- 353 C FY T L+ T VR + + G+KITG + +PG+ KIL+TSNDSRIR+Y+ Sbjct: 715 RCIFYDT--EHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDL 771
Query: 354 -GTEIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSG 530 + K+KG+ NS S I ASFS + ++VS SED V IWS + V+R + Sbjct: 772 RDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWSTYHDLSKFTSVRRDRND 831
Query: 531 AYEDFSVKHVLV--AVPWPGPS 590 +E + +V A+ P PS Sbjct: 832 FWEGIKAHNAVVTSAIFAPNPS 853
>sp|Q498F0|WDR44_XENLA WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2 SV=1 Length = 912
Score = 141 bits (355), Expect = 4e-33 Identities = 85/219 (38%), Positives = 123/219 (56%), Gaps = 7/219 (3%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQ---EMVTAACYTPNGQGAVVGSYKG 176 FHP D +F+SGSLDGK+R+W I + +V W ++ +++TAA + NG+ AV+G+Y G Sbjct: 658 FHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEIDGQTKLITAANFCQNGKHAVIGTYDG 717
Query: 177 TCRFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYN- 353 C FY T L+ T VR + + G+KITG + +PG+ KIL+TSNDSRIR+Y+ Sbjct: 718 RCIFYDT--EHLKYHTQIHVRSTRGRNRVGRKITGIEPLPGEN-KILVTSNDSRIRLYDL 774
Query: 354 -GTEIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSG 530 + K+KG NS S I ASFS + +IVS SED V IWS + V+R + Sbjct: 775 RDLSLSMKYKGCVNSSSQIKASFSHDFTYIVSGSEDKYVYIWSTYHDLSKFTSVRRDRND 834
Query: 531 AYEDFSVKHVLV--AVPWPGPSSRPIHVISGDSHIGESA 641 +E + +V A+ P P S + G+ A Sbjct: 835 FWEGIKAHNAVVTSAIFAPNPGLMVSAETSSEKQEGDQA 873
>sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c OS=Schizosaccharomyces pombe GN=SPAC3H5.08c PE=1 SV=1 Length = 855
Score = 129 bits (324), Expect = 1e-29 Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 11/216 (5%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTCR 185 FHP D F+SGSLD K+R+W I+E V W +L E++TA ++P+G A+ G++ G C Sbjct: 357 FHPKDDRFFLSGSLDCKLRLWSIKEKAVSFWNELPELITAVAFSPDGGLAIAGTFVGLCL 416
Query: 186 FYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQF-------VPGDKMKILITSNDSRIR 344 FY T G L+ T +R + K ++G K+TG Q + GD ++L+T+NDSRIR Sbjct: 417 FYDTRG--LRFRTQMSIRSSRGKNAKGSKVTGIQTRTQMIDNIAGD-TEMLVTTNDSRIR 473
Query: 345 VYN--GTEIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQR 518 +YN + KFKG N++S A F +G +++ SED +V IW + + Sbjct: 474 IYNLRDKSLELKFKGHANAQSQNRAYFDDDGNYVICGSEDHQVFIWDLPPQ-----HMHK 528
Query: 519 TNSGAYEDF--SVKHVLVAVPWPGPSSRPIHVISGD 620 T +E F SV+ + AV P ++ + +SGD Sbjct: 529 TKKKKHEHFKASVRPITAAVFAP-TKTKQLLTLSGD 563
>sp|O60136|YNS5_SCHPO Uncharacterized WD repeat-containing protein C18H10.05 OS=Schizosaccharomyces pombe GN=SPBC18H10.05 PE=2 SV=1 Length = 586
Score = 93.6 bits (231), Expect = 9e-19 Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 8/165 (4%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTCR 185 FHP+D +F+SGSLD K+++W I +++ W +L+ +V+ C+ P+G+ VVG + G C Sbjct: 303 FHPIDDRYFVSGSLDCKIQLWSILRHKILHWTELEYVVSTICFYPDGESIVVGMFYGLCA 362
Query: 186 FYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQ---FVPGDKMK---ILITSNDSRIRV 347 Y+T LQ +++ + R++ ++TG Q +P D +L+++ND+ IR+ Sbjct: 363 IYET--KNLQYVSSWLIHH-SPSRNKKCRVTGLQCASIIPNDSKSDNVVLVSTNDNAIRL 419
Query: 348 YNGT--EIGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIW 476 YN + K + + S + +I+S S+ + V +W Sbjct: 420 YNTVTHALVLKLSDAHRVNGRVLSRLSEDNSYIISGSDTNEVVLW 464
>sp|Q03177|YMZ2_YEAST WD repeat-containing protein YMR102C OS=Saccharomyces cerevisiae GN=YMR102C PE=1 SV=1 Length = 834
Score = 75.9 bits (185), Expect = 2e-13 Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 24/210 (11%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTP-NGQGAVVGSYKGT 179 +FHP D FISG LD K R+W I + +V D Q+++T+ +P G+ ++G++ G Sbjct: 325 EFHPTDDRFFISGCLDHKCRLWSILDDEVSFEYDCQDLITSVTLSPEEGKYTIIGTFNGY 384
Query: 180 CRFYKTPGNKLQLDTTFEVRDPKT--------------KRSQGKKITGFQFVPG---DKM 308 T G L ++F V D +T K G ++TG Q + Sbjct: 385 VHILMTRG--LTPVSSFHVADRQTQEQNAHVMVTETDSKIRHGPRVTGLQAFRSQLDNSF 442
Query: 309 KILITSNDSRIRVYN--GTEIGSKFKGFRNSKSHISASFS--RNGRFIVSASEDSRVCIW 476 ++++TSNDSRIR+++ ++ KGF + S A S +V++S+D V W Sbjct: 443 RLVVTSNDSRIRIFDLEQRKLLEVLKGFHSGSSQHKAQLSIWHGQPIVVNSSDDHWVYGW 502
Query: 477 SF--NDSSYDYPDVQRTNSGAYEDFSVKHV 560 +D D + +R G S++ + Sbjct: 503 RLKSSDRENDQDEPKRKPKGLARSGSLRSI 532
Score = 32.7 bits (73), Expect = 1.9 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +3
Query: 339 IRVYNGTEIGSKFKGFR-NSKSHISASFSRNGRFIVSASEDSRVCIW 476 + Y G + S K SK+ S FSR+G+F+ + S+D ++ IW Sbjct: 154 LMAYEGETVTSTSKSSEPTSKAIWSTKFSRDGKFMATGSKDGKIRIW 200
>sp|P32330|YKM1_YEAST WD repeat-containing protein YKL121W OS=Saccharomyces cerevisiae GN=YKL121W PE=1 SV=1 Length = 852
Score = 63.5 bits (153), Expect = 1e-09 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 26/189 (13%) Frame = +3
Query: 6 FHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYT-PNGQGAVVGSYKGTC 182 F P D I+G LD + R+W I + +V D ++++T+ + P G+ ++G++ G Sbjct: 328 FFPNDDRFIITGCLDHRCRLWSILDNEVSYAFDCKDLITSLTLSPPGGEYTIIGTFNGYI 387
Query: 183 RFYKTPGNKLQLDTTFEVRDPKT---------------KRSQGKKITGFQ--FVPGDK-M 308 T G L+ ++F V D T K G +ITG Q F DK + Sbjct: 388 YVLLTHG--LKFVSSFHVSDKSTQGTTKNSFHPSSEYGKVQHGPRITGLQCFFSKVDKNL 445
Query: 309 KILITSNDSRIRVY--NGTEIGSKFKGFRNSKSHISASF--SRNGRFIVSASEDSRVCIW 476 ++++T+NDS+I+++ N + FKGF++ S F +N + + S+D W Sbjct: 446 RLIVTTNDSKIQIFDLNEKKPLELFKGFQSGSSRHRGQFLMMKNEPVVFTGSDDHWFYTW 505
Query: 477 ---SFNDSS 494 SFN S+ Sbjct: 506 KMQSFNLSA 514
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1 Length = 395
Score = 59.3 bits (142), Expect = 2e-08 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 3/151 (1%) Frame = +3
Query: 36 SGSLDGKVRIWCIQEPQVIDWVDLQE-MVTAACYTPNGQGAVVGSYKGTCRFYKTPGNKL 212 SGS D +RIWC + I + E V++ C+ +G GSY G R + + Sbjct: 207 SGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTC 266
Query: 213 QLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDS-RIRVYNGTEIGSKFKGFR 389 E P IT +F P K + N++ ++ Y + ++ G Sbjct: 267 VKTLIDEEHPP---------ITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHE 317
Query: 390 NSKSHISASFS-RNGRFIVSASEDSRVCIWS 479 NSK ++A+FS G++IVS SED +V IW+ Sbjct: 318 NSKYCVAANFSVTGGKWIVSGSEDHKVYIWN 348
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQH8 |
Definition |
tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
199 |
Score (bit) |
229.0 |
E-value |
1.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960149|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_K03, 5' (693 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella paten... 229 1e-58 tr|A9S405|A9S405_PHYPA Predicted protein OS=Physcomitrella paten... 229 1e-58 tr|A9TFC5|A9TFC5_PHYPA Predicted protein (Fragment) OS=Physcomit... 224 4e-57 tr|A9T0D4|A9T0D4_PHYPA Predicted protein (Fragment) OS=Physcomit... 222 2e-56 tr|Q9FK21|Q9FK21_ARATH Similarity to WD-containing protein OS=Ar... 219 1e-55 tr|Q9LDG7|Q9LDG7_ARATH WD-40 repeat protein-like (AT3g15470/MJK1... 213 7e-54 tr|B8BJI7|B8BJI7_ORYSI Putative uncharacterized protein OS=Oryza... 212 2e-53 tr|A9TT82|A9TT82_PHYPA Predicted protein OS=Physcomitrella paten... 211 3e-53 tr|Q53P51|Q53P51_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 211 5e-53 tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome... 210 8e-53 tr|A7PNL8|A7PNL8_VITVI Chromosome chr8 scaffold_23, whole genome... 205 2e-51 tr|B6U7W0|B6U7W0_MAIZE Signal transducer OS=Zea mays PE=2 SV=1 205 3e-51 tr|B4FG57|B4FG57_MAIZE Putative uncharacterized protein OS=Zea m... 205 3e-51 tr|Q7FAN9|Q7FAN9_ORYSJ Os04g0678300 protein OS=Oryza sativa subs... 204 6e-51 tr|B8ARG9|B8ARG9_ORYSI Putative uncharacterized protein OS=Oryza... 204 6e-51 tr|Q7XS41|Q7XS41_ORYSJ OSJNBa0074L08.11 protein OS=Oryza sativa ... 201 5e-50 tr|Q6H5U9|Q6H5U9_ORYSJ WD-40 repeat protein-like OS=Oryza sativa... 198 3e-49 tr|B8AFU6|B8AFU6_ORYSI Putative uncharacterized protein OS=Oryza... 198 3e-49 tr|B4FFW3|B4FFW3_MAIZE Putative uncharacterized protein OS=Zea m... 197 4e-49 tr|B8BNG0|B8BNG0_ORYSI Putative uncharacterized protein OS=Oryza... 194 3e-48 tr|O80935|O80935_ARATH Putative WD-40 repeat protein OS=Arabidop... 193 1e-47 tr|A5BEL4|A5BEL4_VITVI Putative uncharacterized protein OS=Vitis... 189 1e-46 tr|A7QF05|A7QF05_VITVI Chromosome chr16 scaffold_86, whole genom... 182 1e-44 tr|Q9LZ59|Q9LZ59_ARATH Putative uncharacterized protein T22P11_2... 182 2e-44 tr|A7QB92|A7QB92_VITVI Chromosome chr4 scaffold_73, whole genome... 182 2e-44 tr|A7QWG6|A7QWG6_VITVI Chromosome undetermined scaffold_203, who... 181 3e-44 tr|A3CFH2|A3CFH2_ORYSJ Putative uncharacterized protein OS=Oryza... 181 4e-44 tr|A5AKI0|A5AKI0_VITVI Putative uncharacterized protein OS=Vitis... 174 4e-42 tr|A7QU32|A7QU32_VITVI Chromosome chr2 scaffold_176, whole genom... 174 5e-42 tr|Q7F9S6|Q7F9S6_ORYSJ OSJNBb0032E06.1 protein OS=Oryza sativa s... 173 8e-42
>tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224465 PE=4 SV=1 Length = 635
Score = 229 bits (585), Expect = 1e-58 Identities = 114/199 (57%), Positives = 147/199 (73%), Gaps = 2/199 (1%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D +FISGSLD KVRIWCI + V+DW DLQEMVTA CY P+G+ AVVGS+KGTC Sbjct: 309 QFNPVDDRYFISGSLDDKVRIWCIPDHHVVDWSDLQEMVTAVCYAPDGKRAVVGSHKGTC 368
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFY T GNKLQLD +VRD + K+ GKKITG + +PGD K+L+TSNDS +R+Y+G + Sbjct: 369 RFYNTTGNKLQLDAHKDVRD-ENKKGAGKKITGIRCMPGDPHKVLVTSNDSCVRIYDGLD 427
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFN--DSSYDYPDVQRTNSGAY 536 + +K+KG RN KS IS+SFS G FI+SASEDSRV +W+ N D S +R A Sbjct: 428 LVAKYKGLRNVKSQISSSFSSTGDFIISASEDSRVLVWNSNKKDISNRSSVYRRDKQLAC 487
Query: 537 EDFSVKHVLVAVPWPGPSS 593 E+F+ ++V VA+ WPG S+ Sbjct: 488 EEFTSRYVSVAISWPGSST 506
>tr|A9S405|A9S405_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74281 PE=4 SV=1 Length = 328
Score = 229 bits (585), Expect = 1e-58 Identities = 115/200 (57%), Positives = 150/200 (75%), Gaps = 2/200 (1%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+PLD +F+SGSLD KVRIW I + V+DW DLQEMVTA CYT +G+ A+VGSYKGTC Sbjct: 29 QFNPLDDRYFLSGSLDDKVRIWSIPDHHVVDWSDLQEMVTAVCYTADGKRAIVGSYKGTC 88
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFY GNKLQL+ +VR+ ++K+++GKKITG +PGD K+L+TSNDSR+RVY+G Sbjct: 89 RFYNATGNKLQLEAHIDVRE-ESKKARGKKITGLHCMPGDPKKVLVTSNDSRVRVYDGLN 147
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIW-SFN-DSSYDYPDVQRTNSGAY 536 + +K+KG RN KS IS+SFS +G FIVSASEDSRV +W SFN D+S +R + Sbjct: 148 LVAKYKGLRNVKSQISSSFSPSGDFIVSASEDSRVLVWSSFNKDTSNKTSLYRRDKQLSC 207
Query: 537 EDFSVKHVLVAVPWPGPSSR 596 E+F+ +HV VA+ WP S+R Sbjct: 208 EEFTARHVSVAITWPDSSAR 227
>tr|A9TFC5|A9TFC5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144791 PE=4 SV=1 Length = 666
Score = 224 bits (571), Expect = 4e-57 Identities = 112/200 (56%), Positives = 146/200 (73%), Gaps = 2/200 (1%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+PLD +F+SGSLD KVRIW I + V+DW DLQEMVTA CYTP+G+ A+VGSYKGTC Sbjct: 327 QFNPLDDRYFLSGSLDDKVRIWSIPDHHVVDWSDLQEMVTAVCYTPDGKKAIVGSYKGTC 386
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFY GNKLQL +VR+ ++K+++GKKITG +P D K+L+TSNDSR+RVY+G + Sbjct: 387 RFYNAIGNKLQLQAHVDVRE-ESKKARGKKITGLHCMPKDPNKVLVTSNDSRVRVYDGLD 445
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSF--NDSSYDYPDVQRTNSGAY 536 + +K+KG RN KS IS+SFS NG FI+SASEDSRV +WS D S ++ + Sbjct: 446 LVAKYKGLRNVKSQISSSFSPNGDFIISASEDSRVLVWSSANRDISNKSSLYRKDKQLSC 505
Query: 537 EDFSVKHVLVAVPWPGPSSR 596 E+F+ +HV VA+ WP S R Sbjct: 506 EEFTSRHVSVAIAWPDSSVR 525
>tr|A9T0D4|A9T0D4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138359 PE=4 SV=1 Length = 266
Score = 222 bits (566), Expect = 2e-56 Identities = 109/196 (55%), Positives = 144/196 (73%), Gaps = 2/196 (1%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D +F+SGSLD K+R W I QV+DW+DL+EM+TA Y P+G+ A+VGS+KGTC Sbjct: 64 QFNPVDDSYFLSGSLDYKLRTWSIPGHQVVDWIDLREMITAVSYVPDGEKAIVGSHKGTC 123
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFY T GNKLQLD +F+VR + K+ +GKKITG +PGD K+L+TSNDSRIRVY+G Sbjct: 124 RFYNTKGNKLQLDASFDVR-TENKKGRGKKITGLHCMPGDPQKVLVTSNDSRIRVYDGMG 182
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFN--DSSYDYPDVQRTNSGAY 536 + +K+KG +N S ISAS++RNG +I+SASEDSRV IWS + D S R A Sbjct: 183 LCAKYKGLKNINSQISASYTRNGDYIISASEDSRVLIWSSDNKDPSSAKSLYGRDKQLAC 242
Query: 537 EDFSVKHVLVAVPWPG 584 E+FS + V +A+PWPG Sbjct: 243 EEFSCRFVSLAIPWPG 258
>tr|Q9FK21|Q9FK21_ARATH Similarity to WD-containing protein OS=Arabidopsis thaliana GN=At5g54200 PE=4 SV=1 Length = 825
Score = 219 bits (558), Expect = 1e-55 Identities = 109/197 (55%), Positives = 140/197 (71%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D +FISGSLD KVRIW I + QV+DW DL EMVTAACYTP+GQGA+VGSYKGTC Sbjct: 515 QFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGTC 574
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 Y T NKLQ +++ K K++ KKITGFQFV G ++L+TS DSR RV +G + Sbjct: 575 CLYNTHDNKLQQRREINLKNRK-KKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVD 633
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSGAYED 542 + KFKGFRN+ S ISAS + NG+F+VSASEDS V +W+++ S + T + +YE+ Sbjct: 634 LVHKFKGFRNTNSQISASLTSNGKFLVSASEDSNVYVWNYDSDSRAGRSKRVTVTNSYEN 693
Query: 543 FSVKHVLVAVPWPGPSS 593 F + V VA PWPG S Sbjct: 694 FYCRDVSVAAPWPGKIS 710
>tr|Q9LDG7|Q9LDG7_ARATH WD-40 repeat protein-like (AT3g15470/MJK13_13) (MJK13.13 protein) OS=Arabidopsis thaliana GN=MJK13.13 PE=2 SV=1 Length = 883
Score = 213 bits (543), Expect = 7e-54 Identities = 106/202 (52%), Positives = 141/202 (69%), Gaps = 5/202 (2%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D +FISGSLD KVR+W I + QV+DW DL EMVT+ACYTP+GQG +VGSYKG+C Sbjct: 560 QFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSC 619
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 R Y NKLQ + +++ K K Q KKITGFQFVPG ++L+TS+DSRIRV +GT+ Sbjct: 620 RMYSASDNKLQQKSQINLQNKKKKAHQ-KKITGFQFVPGSSSEVLVTSSDSRIRVVDGTD 678
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTN-----S 527 + +K KGFRN+ S ISAS + +G+++VSASEDS V IW + +S P N + Sbjct: 679 LVNKLKGFRNTSSQISASITADGKYVVSASEDSHVYIWKY-ESPASRPSRSNNNKNVTVT 737
Query: 528 GAYEDFSVKHVLVAVPWPGPSS 593 +YE F + V A+ WPG +S Sbjct: 738 NSYEHFHSQDVSAAISWPGMAS 759
>tr|B8BJI7|B8BJI7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35405 PE=4 SV=1 Length = 477
Score = 212 bits (539), Expect = 2e-53 Identities = 112/225 (49%), Positives = 143/225 (63%), Gaps = 8/225 (3%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D G+FISGSLD KVRIW + E QV+DW DL +MVTAACYTP+GQ A+VGS+KG+C Sbjct: 165 QFNPVDDGYFISGSLDSKVRIWSVAERQVVDWSDLDDMVTAACYTPDGQAAIVGSHKGSC 224
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFYKT KL + ++ K ++S KKITGFQF PG+ +IL+T+ DS+IRV+NG Sbjct: 225 RFYKTADCKLNQEAQIDMNISKKRKSHAKKITGFQFAPGNPSEILVTTADSQIRVFNGIT 284
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDS-------SYDYPDVQRT 521 + KFKGF+N+ S ISAS+S +GR++V ASEDS V +W S Sbjct: 285 VLQKFKGFKNTSSQISASYSGDGRYVVCASEDSNVYVWRRATSPGGAAGGGVAVKAKTWR 344
Query: 522 NSGAYEDFSVKHVLVAVPWP-GPSSRPIHVISGDSHIGESAATHV 653 S AYE F K V AVPWP P P G E A++ V Sbjct: 345 TSRAYECFFCKDVSAAVPWPLSPCLPPTRGGGGGGDDDERASSSV 389
>tr|A9TT82|A9TT82_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108746 PE=4 SV=1 Length = 305
Score = 211 bits (538), Expect = 3e-53 Identities = 106/196 (54%), Positives = 142/196 (72%), Gaps = 2/196 (1%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D +F+SGSLD K+R W I QV+DWVDL E++TA Y+P+G A+VGS+KGTC Sbjct: 29 QFNPIDDSYFLSGSLDYKLRTWSIPGRQVVDWVDLPEIITAITYSPDGAKAIVGSHKGTC 88
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFY T GNKLQLD + +VR + K+ +GK+ITG +PGD K+LITSNDSRIRVY+G E Sbjct: 89 RFYNTTGNKLQLDASIDVR-TENKKGRGKRITGVHCMPGDPQKVLITSNDSRIRVYDGQE 147
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFN--DSSYDYPDVQRTNSGAY 536 + +K+KG +N S ISAS++ +G +I+SASEDSRV IWS + D S +R + Sbjct: 148 LCAKYKGLKNVNSLISASYTSSGDYIISASEDSRVLIWSSDNKDPSSAKSLYRRDKQLSC 207
Query: 537 EDFSVKHVLVAVPWPG 584 E+FS V +A+PWPG Sbjct: 208 EEFSCHLVSLAIPWPG 223
>tr|Q53P51|Q53P51_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g08400 PE=4 SV=1 Length = 892
Score = 211 bits (536), Expect = 5e-53 Identities = 111/225 (49%), Positives = 143/225 (63%), Gaps = 8/225 (3%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D G+FISGSLD KVRIW + E QV+DW DL +MVTAACYTP+GQ A+VGS+KG+C Sbjct: 580 QFNPVDDGYFISGSLDSKVRIWSVAERQVVDWSDLDDMVTAACYTPDGQAAIVGSHKGSC 639
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 RFYKT KL + ++ K ++S KKITGFQF PG+ +IL+T+ DS+IRV+NG Sbjct: 640 RFYKTADCKLNQEAQIDMNISKKRKSHAKKITGFQFAPGNPSEILVTTADSQIRVFNGIT 699
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDS-------SYDYPDVQRT 521 + KFKGF+N+ S ISAS+S +GR++V +SEDS V +W S Sbjct: 700 VLQKFKGFKNTSSQISASYSGDGRYVVCSSEDSNVYVWRRATSPGGAAGGGVAVKAKTWR 759
Query: 522 NSGAYEDFSVKHVLVAVPWP-GPSSRPIHVISGDSHIGESAATHV 653 S AYE F K V AVPWP P P G E A++ V Sbjct: 760 TSRAYECFFCKDVSAAVPWPLSPCLPPTRGGGGGGDDDERASSSV 804
>tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027633001 PE=4 SV=1 Length = 769
Score = 210 bits (534), Expect = 8e-53 Identities = 107/194 (55%), Positives = 134/194 (69%) Frame = +3
Query: 3 QFHPLDPGHFISGSLDGKVRIWCIQEPQVIDWVDLQEMVTAACYTPNGQGAVVGSYKGTC 182 QF+P+D +FISGSLD KVRIW I + QV+DW DL EMVTAACYTP+GQGA+VGSYKG+C Sbjct: 453 QFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSC 512
Query: 183 RFYKTPGNKLQLDTTFEVRDPKTKRSQGKKITGFQFVPGDKMKILITSNDSRIRVYNGTE 362 R Y T NKLQ +++ K K+ KKITGFQF PG ++LITS DSRIRV +G + Sbjct: 513 RLYNTSENKLQPKGQINLQN-KKKKPHHKKITGFQFAPGSSSEVLITSADSRIRVIDGVD 571
Query: 363 IGSKFKGFRNSKSHISASFSRNGRFIVSASEDSRVCIWSFNDSSYDYPDVQRTNSGAYED 542 + KFKGFRN+ ISAS + NG+++V ASEDS V +W + + T S YE Sbjct: 572 LIHKFKGFRNTNRQISASVTENGKYVVCASEDSYVYVWKHDTRPGRSKGIAVTRS--YEH 629
Query: 543 FSVKHVLVAVPWPG 584 F + V VA+PWPG Sbjct: 630 FHSQDVSVAIPWPG 643
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