DK960151
Clone id TST39A01NGRL0006_K05
Library
Length 682
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_K05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
ATTGGGTTCTTGCCCAGTTTCATTCTCTAGCTGCATGGAGGGCTGGATTCACACGTACAG
AGTGCGGTTTCCGTCAGCATTTCTTCTGAAGGCTTGAGCACATTTGGGTTCCCATCTCTG
TCGAATTTGGATAATTTTTGTGATCTCGGACTCACATGGTCGTTCTTTAGCTGCTCTAAG
CCAGGACCTTCAAGCTCAGCTTCATTATACTTTTGGGCCTACTTCACTAATGAGAGCTGG
TCTTTAATTGAAAGACATAAGCTTGCTTTTGCTTCAGGCAAAAGTTCTCAATGAACTGGT
CACTTTCCATCACGAGAAGGGAGGACTGGTGGTCTTCGGGTGGCACCAATGGCTGGGCCA
CTTGTATTGTCATGGGTTTTCTGTTTGGGCTTTATGCTATGCGTTCCTTGATGTGGCCAT
TCCTAAAACGTTATTTGGGGAGGAGCTCGTCCAACCTCTCCTTGACGAGTAGCGAATGCG
CTTCTGATGTCTCTAGTGGTGGTCTCCCCATTATTACTGAAGCTGACTTGCAAAGGTTAC
TGATGCTGTTGGATGAAGAGGGGCATTCATGTGGAACTCCGTGGATACCTGTGGTTGATA
AATACAGTGATACCCTATCATACCATGCAAAACTTCGTGAGCCAAAGGATGGAAGCCCTA
CCGAATACCTTAGCACATCCCT
■■Homology search results ■■ -
sp_hit_id Q5K9L9
Definition sp|Q5K9L9|ATG4_CRYNE Cysteine protease ATG4 OS=Cryptococcus neoformans
Align length 88
Score (bit) 32.7
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960151|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_K05, 5'
(682 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5K9L9|ATG4_CRYNE Cysteine protease ATG4 OS=Cryptococcus neof... 33 1.8
sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens GN... 32 2.4
sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=... 31 5.3
sp|Q08A71|ANM6_ARATH Probable protein arginine N-methyltransfera... 30 9.1

>sp|Q5K9L9|ATG4_CRYNE Cysteine protease ATG4 OS=Cryptococcus
neoformans GN=ATG4 PE=3 SV=1
Length = 1193

Score = 32.7 bits (73), Expect = 1.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Frame = -3

Query: 530 QVSFSNNGETTTRDIRSAFATRQGEVGRAPPQITF*E-------------WPHQGTHSIK 390
Q S ++ TT+R I SAF + R P+ +F + WP SI+
Sbjct: 169 QSSSTSTDSTTSRSITSAFTRQNSIQSRRSPRTSFGQAHSRRASQDSQMSWP--APRSIR 226

Query: 389 PKQKTHDNTSGPAIGATRRPPVLPSRDG 306
+HD +S P A+ +P R G
Sbjct: 227 SSTTSHDPSSDPQNSASSTGVPIPQRQG 254


>sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens
GN=ZNF592 PE=1 SV=2
Length = 1267

Score = 32.3 bits (72), Expect = 2.4
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = -3

Query: 323 LPSRDGK*PVH*ELLPEAKASLCLSIKDQLSLVK*AQKYNEAELEGPGLEQLKNDHVSPR 144
+P R P H +L A + L K S+ K Q + +L GP E K P+
Sbjct: 268 VPPRQRLKPAHSKLSSCVAALVALQAKRVASVTKEDQPGHTKDLSGPTKESSKGSPKMPK 327

Query: 143 SQKLSKFDRDGNPNVLKPSEEMLTETALCTCESS 42
S K + + +KPS+ + ++C+ SS
Sbjct: 328 SPKSPRSPLEATRKSIKPSD---SPRSICSDSSS 358


>sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos
taurus GN=SRD5A1 PE=2 SV=1
Length = 257

Score = 31.2 bits (69), Expect = 5.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3

Query: 348 NGWATCIVMGFLFGLYAMRSLMWPFLKR 431
N W CI++ YA RSL++PFL R
Sbjct: 78 NRWPNCILLAMFLVHYAQRSLVFPFLIR 105


>sp|Q08A71|ANM6_ARATH Probable protein arginine N-methyltransferase
6 OS=Arabidopsis thaliana GN=PRMT6 PE=2 SV=1
Length = 435

Score = 30.4 bits (67), Expect = 9.1
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3

Query: 209 YNEAELE---GPGLEQLKNDHVSPRSQKLSKFDRDGNPNVLKPSEEMLTETALCTCESSP 39
+ E ELE GP L RS ++ R G NVL+ S+++ +L T ESSP
Sbjct: 16 HRELELEDKQGPSLSSF--GRAKKRSHAGARDPRGGLANVLRVSDQLGEHKSLETSESSP 73

Query: 38 P 36
P
Sbjct: 74 P 74


tr_hit_id A9TZ10
Definition tr|A9TZ10|A9TZ10_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 56
Score (bit) 58.9
E-value 3.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960151|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_K05, 5'
(682 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TZ10|A9TZ10_PHYPA Predicted protein (Fragment) OS=Physcomit... 59 3e-07
tr|Q8W255|Q8W255_MEDSA Putative nodule membrane protein OS=Medic... 47 0.001
tr|Q8LAQ0|Q8LAQ0_ARATH Membrane related protein-like OS=Arabidop... 45 0.003
tr|Q9FK24|Q9FK24_ARATH Membrane related protein-like OS=Arabidop... 45 0.004
tr|Q93YV2|Q93YV2_ARATH Putative membrane related protein CP5 OS=... 42 0.036
tr|Q94C36|Q94C36_ARATH At3g13062 OS=Arabidopsis thaliana GN=At3g... 41 0.062
tr|Q8GWN9|Q8GWN9_ARATH Putative uncharacterized protein OS=Arabi... 41 0.062
tr|Q3EB74|Q3EB74_ARATH Uncharacterized protein At3g13062.2 OS=Ar... 41 0.062
tr|A7Q4I7|A7Q4I7_VITVI Chromosome chr9 scaffold_49, whole genome... 41 0.080
tr|Q9LG14|Q9LG14_ARATH F14J16.24 OS=Arabidopsis thaliana PE=4 SV=1 39 0.31
tr|A9TCG3|A9TCG3_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.31
tr|Q7F1L8|Q7F1L8_ORYSJ Putative membrane related protein CP5 OS=... 39 0.40
tr|Q0D845|Q0D845_ORYSJ Os07g0185200 protein OS=Oryza sativa subs... 39 0.40
tr|B8B7W5|B8B7W5_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.40
tr|B4G219|B4G219_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.40
tr|B7FHR4|B7FHR4_MEDTR Putative uncharacterized protein (Fragmen... 37 1.2
tr|A9U359|A9U359_PHYPA Predicted protein OS=Physcomitrella paten... 37 1.2
tr|A7QJ33|A7QJ33_VITVI Chromosome chr2 scaffold_105, whole genom... 36 2.0
tr|A7P8V4|A7P8V4_VITVI Chromosome chr3 scaffold_8, whole genome ... 35 3.4
tr|Q944M2|Q944M2_ARATH AT4g14500/dl3290w (At4g14500) (Expressed ... 35 5.8
tr|O23306|O23306_ARATH Putative uncharacterized protein dl3290w ... 35 5.8
tr|Q9XIR9|Q9XIR9_ARATH Putative membrane related protein OS=Arab... 34 7.5
tr|Q9XF49|Q9XF49_ARATH Membrane related protein CP5 OS=Arabidops... 34 7.5
tr|Q9LS84|Q9LS84_ARATH Membrane related protein-like (Putative u... 34 7.5
tr|Q93ZZ1|Q93ZZ1_ARATH Putative uncharacterized protein At3g2308... 34 7.5
tr|Q8L7P8|Q8L7P8_ARATH Membrane related protein CP5, putative OS... 34 7.5
tr|Q2V3T7|Q2V3T7_ARATH Uncharacterized protein At3g23080.2 OS=Ar... 34 7.5
tr|Q0CVG4|Q0CVG4_ASPTN Putative uncharacterized protein OS=Asper... 34 7.5
tr|Q7XTJ2|Q7XTJ2_ORYSJ Os04g0119500 protein OS=Oryza sativa subs... 34 9.8
tr|Q6ZXK5|Q6ZXK5_ORYSJ Membrane related protein OS=Oryza sativa ... 34 9.8

>tr|A9TZ10|A9TZ10_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_152890 PE=4 SV=1
Length = 335

Score = 58.9 bits (141), Expect = 3e-07
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +3

Query: 513 ITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLSTS 680
+TE DL ++L +L ++ + + W V+DK +D++SY AK R+PKDG TEYLST+
Sbjct: 7 VTEEDLAQVLSVLSQDDNGENSQWEQVIDKQNDSVSYTAKRRDPKDGGATEYLSTT 62


>tr|Q8W255|Q8W255_MEDSA Putative nodule membrane protein OS=Medicago
sativa PE=2 SV=1
Length = 424

Score = 47.0 bits (110), Expect = 0.001
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = +3

Query: 486 DVSSGGLPIITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTE 665
D S+G +T DL L L++E+ G PWI ++DK + T+SY A REPKDG P
Sbjct: 114 DTSNG----VTINDLHHLYKLVEEKDG--GLPWIQMMDKSTPTMSYQAWRREPKDGPPQY 167

Query: 666 YLST 677
ST
Sbjct: 168 RSST 171


>tr|Q8LAQ0|Q8LAQ0_ARATH Membrane related protein-like OS=Arabidopsis
thaliana PE=2 SV=1
Length = 449

Score = 45.4 bits (106), Expect = 0.003
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3

Query: 513 ITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLS 674
+TE DL+ L+ L++ + G WI ++D+++ + Y A LREPK+G PTEY S
Sbjct: 129 VTELDLRHLVQLVERKDG--GQAWIQMMDRFTSGMRYQAWLREPKNG-PTEYRS 179


>tr|Q9FK24|Q9FK24_ARATH Membrane related protein-like OS=Arabidopsis
thaliana PE=4 SV=1
Length = 400

Score = 45.1 bits (105), Expect = 0.004
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3

Query: 513 ITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLS 674
+TE DL+ L+ L++ + G WI ++D+++ + Y A LREPK+G PTEY S
Sbjct: 80 VTELDLRHLVQLVERKDG--GQAWIQMMDRFTPGMRYQAWLREPKNG-PTEYRS 130


>tr|Q93YV2|Q93YV2_ARATH Putative membrane related protein CP5
OS=Arabidopsis thaliana GN=At1g55960 PE=2 SV=1
Length = 403

Score = 42.0 bits (97), Expect = 0.036
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3

Query: 510 IITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKD-GSPTEYLSTS 680
++++ DL+ L+ L+EE + W V+ K +D +SY AK +PKD G P +YLS +
Sbjct: 82 LVSDEDLKFLIENLEEETNDSTEIWEHVIHKSNDRISYSAKRCKPKDGGGPMKYLSVT 139


>tr|Q94C36|Q94C36_ARATH At3g13062 OS=Arabidopsis thaliana
GN=At3g13062 PE=2 SV=1
Length = 403

Score = 41.2 bits (95), Expect = 0.062
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3

Query: 510 IITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLSTS 680
++++ DL+ L+ L E W V+ K + +SY AK +P DGSP +YLST+
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEI-WEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTT 138


>tr|Q8GWN9|Q8GWN9_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 403

Score = 41.2 bits (95), Expect = 0.062
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3

Query: 510 IITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLSTS 680
++++ DL+ L+ L E W V+ K + +SY AK +P DGSP +YLST+
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEI-WEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTT 138


>tr|Q3EB74|Q3EB74_ARATH Uncharacterized protein At3g13062.2
OS=Arabidopsis thaliana GN=At3g13062 PE=4 SV=1
Length = 440

Score = 41.2 bits (95), Expect = 0.062
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3

Query: 510 IITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLSTS 680
++++ DL+ L+ L E W V+ K + +SY AK +P DGSP +YLST+
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEI-WEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTT 138


>tr|A7Q4I7|A7Q4I7_VITVI Chromosome chr9 scaffold_49, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029707001
PE=4 SV=1
Length = 381

Score = 40.8 bits (94), Expect = 0.080
Identities = 32/117 (27%), Positives = 53/117 (45%)
Frame = +3

Query: 330 WSSGGTNGWATCIVMGFLFGLYAMRSLMWPFLKRYXXXXXXXXXXXXXXXXXDVSSGGLP 509
W G GWAT + + + + R + + +S
Sbjct: 16 WEIHGAGGWATMVAVLVIILWHLGRLIFSARFRSSSNSTPTSLSASAVNPQFRISE---- 71

Query: 510 IITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPKDGSPTEYLSTS 680
I+ +ADL+ L+ LDE+ + W VVDK ++ +SY+AK +PKDG P +Y+S +
Sbjct: 72 IVGDADLKTLIDNLDEK-LNLNERWDNVVDKRNNFVSYNAKCCKPKDG-PLKYVSVT 126


>tr|Q9LG14|Q9LG14_ARATH F14J16.24 OS=Arabidopsis thaliana PE=4 SV=1
Length = 440

Score = 38.9 bits (89), Expect = 0.31
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3

Query: 510 IITEADLQRLLMLLDEEGHSCGTPWIPVVDKYSDTLSYHAKLREPK--DGSPTEYLSTS 680
++++ DL+ L+ L+EE + W V+ K +D +SY AK +PK G P +YLS +
Sbjct: 82 LVSDEDLKFLIENLEEETNDSTEIWEHVIHKSNDRISYSAKRCKPKVDGGGPMKYLSVT 140