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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960166
Clone id TST39A01NGRL0006_K20
Library
Length 651
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_K20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGGAGGGTGAGCCTTTGATATGGCAACAATGGGGGCTGCAGCGCTTTCTTCAAGCACCTT
CGCCGGCCAGGCTGTGTATAAGCCCCACGAGCGAGCTGAGCTCTGAGGTAGGCAATGTGG
GCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATG
GCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGG
GAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCT
TCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGG
GCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGT
TCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCC
TCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCATGGGCGCTG
TTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCATCTACCCTG
GTGGCTCCTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCATTTGCTG
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 186
Score (bit) 343.0
E-value 4.0e-94
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960166|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_K20, 5'
         (651 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   343   4e-94
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   341   2e-93
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   341   2e-93
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   341   2e-93
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   340   3e-93
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   340   3e-93
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   340   4e-93
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   340   4e-93
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   339   6e-93
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   339   6e-93
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   339   6e-93
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   338   1e-92
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   338   1e-92
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   334   4e-92
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   336   5e-92
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   336   5e-92
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   336   7e-92
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   336   7e-92
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   335   9e-92
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   332   4e-91
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   333   4e-91
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   333   6e-91
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   332   8e-91
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   332   1e-90
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   332   1e-90
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   332   1e-90
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   331   2e-90
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   331   2e-90
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   331   2e-90
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   330   3e-90

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  343 bits (880), Expect = 4e-94
 Identities = 161/186 (86%), Positives = 174/186 (93%), Gaps = 4/186 (2%)
 Frame = +3

Query: 105 EVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 272
           +VG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 273 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 452
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 453 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 632
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 633 DPEAFA 650
           DPEAFA
Sbjct: 199 DPEAFA 204


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  341 bits (875), Expect = 2e-93
 Identities = 167/205 (81%), Positives = 179/205 (87%), Gaps = 4/205 (1%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFS 215
           L +PS A   +      +SE+  +GE R++MRKT  K     S SPWYGPDRVKYLGPFS
Sbjct: 8   LSSPSLAGKAVK-LGPTASEI--IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFS 64

Query: 216 GEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 395
           GE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NG
Sbjct: 65  GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 124

Query: 396 VKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 575
           VKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG
Sbjct: 125 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLG 184

Query: 576 EVEDPIYPGGSFDPLGLADDPEAFA 650
           EV DP+YPGGSFDPLGLADDPEAFA
Sbjct: 185 EVVDPLYPGGSFDPLGLADDPEAFA 209


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  341 bits (875), Expect = 2e-93
 Identities = 163/179 (91%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
 Frame = +3

Query: 120 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 293
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 294 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 473
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 474 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFA 650
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFA
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFA 207


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  341 bits (874), Expect = 2e-93
 Identities = 165/191 (86%), Positives = 174/191 (91%), Gaps = 4/191 (2%)
 Frame = +3

Query: 90  SELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 257
           S  SSE+   G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 21  SPSSSEI--TGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78

Query: 258 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 437
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 79  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 138

Query: 438 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 617
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDP
Sbjct: 139 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP 198

Query: 618 LGLADDPEAFA 650
           LGLADDPEAFA
Sbjct: 199 LGLADDPEAFA 209


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
          Length = 267

 Score =  340 bits (873), Expect = 3e-93
 Identities = 169/205 (82%), Positives = 179/205 (87%), Gaps = 4/205 (1%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFS 215
           L +PS A   +   S  SSE+   G  +  MRKTV+K    SS SPWYGPDRVKYLGPFS
Sbjct: 8   LSSPSFAGNAVK-LSPSSSEI--TGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFS 64

Query: 216 GEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 395
           GEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NG
Sbjct: 65  GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 124

Query: 396 VKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 575
           VKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLG
Sbjct: 125 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLG 184

Query: 576 EVEDPIYPGGSFDPLGLADDPEAFA 650
           EV DP+YPGGSFDPLGLADDPEAFA
Sbjct: 185 EVTDPLYPGGSFDPLGLADDPEAFA 209


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  340 bits (873), Expect = 3e-93
 Identities = 169/205 (82%), Positives = 180/205 (87%), Gaps = 4/205 (1%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFS 215
           L +PS A   +   S  SSE+   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFS
Sbjct: 8   LSSPSFAGKAVK-LSPSSSEI--TGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFS 64

Query: 216 GEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 395
           GE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NG
Sbjct: 65  GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 124

Query: 396 VKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 575
           VKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 125 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 184

Query: 576 EVEDPIYPGGSFDPLGLADDPEAFA 650
           EV DP+YPGGSFDPLGLA+DPEAFA
Sbjct: 185 EVVDPLYPGGSFDPLGLAEDPEAFA 209


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  340 bits (872), Expect = 4e-93
 Identities = 165/191 (86%), Positives = 175/191 (91%), Gaps = 4/191 (2%)
 Frame = +3

Query: 90  SELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 257
           S  SSE+   G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 21  SPSSSEI--TGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78

Query: 258 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 437
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 79  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 138

Query: 438 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 617
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDP
Sbjct: 139 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP 198

Query: 618 LGLADDPEAFA 650
           LGLA+DPEAFA
Sbjct: 199 LGLAEDPEAFA 209


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  340 bits (872), Expect = 4e-93
 Identities = 166/191 (86%), Positives = 174/191 (91%), Gaps = 4/191 (2%)
 Frame = +3

Query: 90  SELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 257
           S  SSEV   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEV--TGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 258 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 437
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 438 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 617
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDP
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP 197

Query: 618 LGLADDPEAFA 650
           LGLA+DPEAFA
Sbjct: 198 LGLAEDPEAFA 208


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  339 bits (870), Expect = 6e-93
 Identities = 166/203 (81%), Positives = 180/203 (88%), Gaps = 2/203 (0%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGE 221
           L +PS A   +   S  +SE+   G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE
Sbjct: 8   LSSPSFAGQAVK-LSPSASEIS--GNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGE 64

Query: 222 APSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVK 401
           +PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVK
Sbjct: 65  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124

Query: 402 FGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 581
           FGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 184

Query: 582 EDPIYPGGSFDPLGLADDPEAFA 650
            DP+YPGGSFDPLGLA+DPEAFA
Sbjct: 185 VDPLYPGGSFDPLGLAEDPEAFA 207


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  339 bits (870), Expect = 6e-93
 Identities = 168/192 (87%), Positives = 173/192 (90%), Gaps = 1/192 (0%)
 Frame = +3

Query: 78  ISPTSELSSEVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPG 254
           + P +ELS +VG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPG
Sbjct: 17  LKPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPG 75

Query: 255 DYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 434
           DYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS
Sbjct: 76  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 135

Query: 435 QIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 614
           QIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD
Sbjct: 136 QIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 195

Query: 615 PLGLADDPEAFA 650
           PLGLADDPEAFA
Sbjct: 196 PLGLADDPEAFA 207
tr_hit_id Q39768
Definition tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding protein of photosystem II OS=Ginkgo biloba
Align length 199
Score (bit) 342.0
E-value 2.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960166|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_K20, 5'
         (651 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   342   2e-95
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   347   5e-94
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   344   3e-93
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   343   5e-93
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   342   9e-93
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   342   9e-93
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   342   1e-92
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   342   2e-92
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   342   2e-92
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   342   2e-92
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   341   2e-92
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   341   2e-92
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   341   2e-92
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   341   2e-92
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   341   2e-92
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   341   2e-92
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   341   3e-92
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   341   3e-92
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   341   3e-92
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   341   3e-92
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   341   3e-92
tr|O64449|O64449_NICSY Light harvesting chlorophyll a/b-binding ...   340   3e-92
tr|B8XLF1|B8XLF1_SOLNI Putative chloroplast chlorophyll a/b bind...   340   3e-92
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   340   3e-92
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   340   4e-92
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ...   340   6e-92
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   339   1e-91
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   338   1e-91
tr|Q41423|Q41423_SOLTU Chlorophyll a/b binding protein OS=Solanu...   338   1e-91
tr|O64450|O64450_NICSY Light harvesting chlorophyll a/b-binding ...   338   1e-91

>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  342 bits (878), Expect(2) = 2e-95
 Identities = 165/199 (82%), Positives = 180/199 (90%), Gaps = 5/199 (2%)
 Frame = +3

Query: 69  RLCISPTSELSSEVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 233
           ++ + P +E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 17  QIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPSY 73

Query: 234 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 413
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEA
Sbjct: 74  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 133

Query: 414 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 593
           VWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPI
Sbjct: 134 VWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPI 193

Query: 594 YPGGSFDPLGLADDPEAFA 650
           YPGGSFDPLGLADDP+AFA
Sbjct: 194 YPGGSFDPLGLADDPDAFA 212



 Score = 31.2 bits (69), Expect(2) = 2e-95
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 20 MATMGAAALSSSTFAGQAVYKP 85
          MATM +A ++SS FAGQ V KP
Sbjct: 1  MATMASAGVASSAFAGQIVLKP 22


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  347 bits (889), Expect = 5e-94
 Identities = 167/191 (87%), Positives = 177/191 (92%)
 Frame = +3

Query: 78  ISPTSELSSEVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 257
           + P +ELS +VGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GEF GD
Sbjct: 18  LKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGEFAGD 76

Query: 258 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 437
           YGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG+Q
Sbjct: 77  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQ 136

Query: 438 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 617
           IF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGGSFDP
Sbjct: 137 IFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDP 196

Query: 618 LGLADDPEAFA 650
           LGLADDP+ FA
Sbjct: 197 LGLADDPDTFA 207


>tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*4 PE=3 SV=1
          Length = 265

 Score =  344 bits (882), Expect = 3e-93
 Identities = 170/203 (83%), Positives = 179/203 (88%), Gaps = 2/203 (0%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGE 221
           L +PS A   +  +   S   GN    RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE
Sbjct: 8   LSSPSFAGQAVKLSPSASEITGN---GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGE 64

Query: 222 APSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVK 401
           APSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVK
Sbjct: 65  APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124

Query: 402 FGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 581
           FGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184

Query: 582 EDPIYPGGSFDPLGLADDPEAFA 650
            DP+YPGGSFDPLGLA+DPEAFA
Sbjct: 185 VDPLYPGGSFDPLGLAEDPEAFA 207


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 262

 Score =  343 bits (880), Expect = 5e-93
 Identities = 161/186 (86%), Positives = 174/186 (93%), Gaps = 4/186 (2%)
 Frame = +3

Query: 105 EVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 272
           +VG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 273 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 452
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 453 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 632
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 633 DPEAFA 650
           DPEAFA
Sbjct: 199 DPEAFA 204


>tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*2 PE=3 SV=1
          Length = 265

 Score =  342 bits (878), Expect = 9e-93
 Identities = 168/203 (82%), Positives = 179/203 (88%), Gaps = 2/203 (0%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGE 221
           L +PS A   +  +   S   GN    RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE
Sbjct: 8   LSSPSFAGQAVKLSPSASEITGN---GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGE 64

Query: 222 APSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVK 401
           +PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVK
Sbjct: 65  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124

Query: 402 FGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 581
           FGEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYRVAGGPLGEV
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184

Query: 582 EDPIYPGGSFDPLGLADDPEAFA 650
            DP+YPGGSFDPLGLA+DPEAFA
Sbjct: 185 VDPLYPGGSFDPLGLAEDPEAFA 207


>tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein
           LHCb1.2 OS=Spinacia oleracea GN=lhcb1.2 PE=4 SV=1
          Length = 267

 Score =  342 bits (878), Expect = 9e-93
 Identities = 170/205 (82%), Positives = 180/205 (87%), Gaps = 4/205 (1%)
 Frame = +3

Query: 48  LQAPSPARLCISPTSELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFS 215
           L +PS A   I      +SE+  +GE RV+MRKT  K    SS SPWYGPDRVKYLGPFS
Sbjct: 8   LSSPSLAGKAIK-LGPTASEI--LGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFS 64

Query: 216 GEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 395
           GEAPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PELLA+NG
Sbjct: 65  GEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNG 124

Query: 396 VKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 575
           VKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG
Sbjct: 125 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLG 184

Query: 576 EVEDPIYPGGSFDPLGLADDPEAFA 650
           EV DP+YPGGSFDPLGLADDPEAFA
Sbjct: 185 EVVDPLYPGGSFDPLGLADDPEAFA 209


>tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein
           OS=Mesembryanthemum crystallinum GN=CAB3 PE=2 SV=1
          Length = 267

 Score =  342 bits (877), Expect = 1e-92
 Identities = 162/182 (89%), Positives = 171/182 (93%), Gaps = 4/182 (2%)
 Frame = +3

Query: 117 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 284
           +GE R++MRKT  K    SSDSPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLS
Sbjct: 28  LGEGRITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87

Query: 285 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 464
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 147

Query: 465 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 644
           LGNPSLVHAQSILAIWACQVILMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEA
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEA 207

Query: 645 FA 650
           FA
Sbjct: 208 FA 209


>tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like
           OS=Solanum tuberosum PE=2 SV=1
          Length = 267

 Score =  342 bits (876), Expect = 2e-92
 Identities = 165/191 (86%), Positives = 175/191 (91%), Gaps = 4/191 (2%)
 Frame = +3

Query: 90  SELSSEVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 257
           S  SSE+   G  R++MRK+V+K    SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGD
Sbjct: 21  SPSSSEI--TGNGRITMRKSVAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 78

Query: 258 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 437
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 79  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 138

Query: 438 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 617
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDP
Sbjct: 139 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP 198

Query: 618 LGLADDPEAFA 650
           LGLADDPEAFA
Sbjct: 199 LGLADDPEAFA 209


>tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 262

 Score =  342 bits (876), Expect = 2e-92
 Identities = 160/186 (86%), Positives = 174/186 (93%), Gaps = 4/186 (2%)
 Frame = +3

Query: 105 EVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 272
           +VG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 273 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 452
           AGLSADP+TFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPKTFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 453 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 632
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 633 DPEAFA 650
           DPEAFA
Sbjct: 199 DPEAFA 204


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  342 bits (876), Expect = 2e-92
 Identities = 165/193 (85%), Positives = 179/193 (92%), Gaps = 2/193 (1%)
 Frame = +3

Query: 78  ISPTSELSSEVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFP 251
           + P +ELS +VGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL GEF 
Sbjct: 18  VKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFA 76

Query: 252 GDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 431
           GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVWFKAG
Sbjct: 77  GDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAG 136

Query: 432 SQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSF 611
           +QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPGGSF
Sbjct: 137 AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSF 196

Query: 612 DPLGLADDPEAFA 650
           DPLGLADDP+ FA
Sbjct: 197 DPLGLADDPDTFA 209