DK960171
Clone id TST39A01NGRL0006_L02
Library
Length 201
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_L02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CTTCTAATTCGTAGCCCCAAGCCCCAGCTCCACCCCCATGGCTGCTGCCGTAATCCTCAC
TTCCTCTTATGTGGCTCCTTCACCCACGATGCCTCCCCTGTATCTACCAAGAGGTTTCCA
TGGTTCCTCTTAACCGTCCTCCTCCTTCGCCGCCACTCCTGCTTCGCAGGTAATATCTAC
GAGCTGGTCCTGTGCGTGGCT
■■Homology search results ■■ -
sp_hit_id Q5T1H1
Definition sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens
Align length 37
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960171|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_L02, 5'
(201 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN... 32 1.3
sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic... 29 6.4
sp|Q8NH04|O2T27_HUMAN Olfactory receptor 2T27 OS=Homo sapiens GN... 29 8.4

>sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens
GN=EGFL10 PE=2 SV=3
Length = 3144

Score = 31.6 bits (70), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1

Query: 61 FLLCGSFTHDASPVSTKRFPWFLLTVLLLRRHSCFAG 171
F + G F + P TK WFL V L+ +H C+ G
Sbjct: 426 FNIIGRFKYVCIPGCTKNPCWFLKNVYLIHQHLCYCG 462


>sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic
reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1
Length = 379

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -2

Query: 194 HRTSS*ILPAKQEWRRRRRTVKRNHGNLLVDTGEASWVKEPHK 66
H S IL WR +T +NHGN V+T E SWV P K
Sbjct: 116 HILHSAILVPYHGWRISHKTHHQNHGN--VETDE-SWVPMPEK 155


>sp|Q8NH04|O2T27_HUMAN Olfactory receptor 2T27 OS=Homo sapiens
GN=OR2T27 PE=2 SV=1
Length = 317

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1

Query: 61 FLLCGSFTHDASPVSTKRFPWFLLTVLLLRRHSCFAGNIYELVL 192
F+L G F S RFPW L ++LL + A N+ +++L
Sbjct: 12 FILLGLF-------SNARFPWLLFALILLVFLTSIASNVVKIIL 48


tr_hit_id Q5QGY3
Definition tr|Q5QGY3|Q5QGY3_9GAMM BryA OS=Candidatus Endobugula sertula
Align length 36
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960171|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_L02, 5'
(201 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5QGY3|Q5QGY3_9GAMM BryA OS=Candidatus Endobugula sertula GN=... 33 9.2
tr|A2CLL5|A2CLL5_9GAMM BryA OS=Candidatus Endobugula sertula GN=... 33 9.2
tr|A2CLL4|A2CLL4_9GAMM BryD OS=Candidatus Endobugula sertula GN=... 33 9.2

>tr|Q5QGY3|Q5QGY3_9GAMM BryA OS=Candidatus Endobugula sertula GN=bryA
PE=4 SV=1
Length = 4889

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2

Query: 173 LPAKQEWRRRRRTVKRNHGNLLVDTGEASWVKEPHK 66
L +Q RR ++ HG L+V GE W+KEP +
Sbjct: 3590 LETQQGVEALRRALQTGHGQLMVTMGEPVWMKEPRR 3625


>tr|A2CLL5|A2CLL5_9GAMM BryA OS=Candidatus Endobugula sertula GN=bryA
PE=4 SV=1
Length = 4888

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2

Query: 173 LPAKQEWRRRRRTVKRNHGNLLVDTGEASWVKEPHK 66
L +Q RR ++ HG L+V GE W+KEP +
Sbjct: 3589 LETQQGVEALRRALQTGHGQLMVTMGEPVWMKEPRR 3624


>tr|A2CLL4|A2CLL4_9GAMM BryD OS=Candidatus Endobugula sertula GN=bryD
PE=4 SV=1
Length = 3476

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2

Query: 173 LPAKQEWRRRRRTVKRNHGNLLVDTGEASWVKEPHK 66
L +Q RR ++ HG L+V GE W+KEP +
Sbjct: 2013 LETQQGVEALRRALQTGHGQLMVTMGEPVWMKEPRR 2048