NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960172
Clone id TST39A01NGRL0006_L03
Library
Length 652
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_L03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GACGACGTGCTGCCAAGCTGCGGGCGTCTCAAGGCTTGAAACTCTCACTCAGCTCCGCGT
GGTTCCTAATCTTTCCACAGAGGAGCTTGCCATGTTCAAGAGTCAGCTTCAGGAGTATGC
ACACAAAGCTGGATGGTCGGCACCTGTTTATGACATAACAAGGGAAGGACCTTCTCATGA
GCCTAGGTTCAAAGCTGTCGTGACTGTCCAAAATGAAACTTTCGAGTCGCCAGCCTTTTA
CGGTAACTTGAAGAAGGCTGAACATGCAGCTGCAGAAGTGGCTTTGATGGCCTTTTCTGC
TAGACCAGAGCTACAGAAACCATTCTCTAACCCTTTGCATGAATCTGGACTATGCAAAAA
TCTTTTACAAGAGTATGCACAGAAAAGCAAACTGCCGATTCCAGTCTACACTCTAACAAA
GTCAGGGGAGACCCATTCTCCAATGTTTACTGCTACTGTGAAGATCGATGGTGTCCTATA
CTAAGGAGGATTAAGCAATAACAACAAAGAGGCAGATATAAAGGCAGCTAACACGGCGTT
ACTTGCAATATGCGCAGAGCGAGGTGGAACTATGGAACAGGCTTTTGACAATCACCTTGC
TGCATTGGGCCAAGAAGCTCCCGCTCCTCCTGTAGCATTAGTTTTTACTCCT
■■Homology search results ■■ -
sp_hit_id Q5YS08
Definition sp|Q5YS08|RNC_NOCFA Ribonuclease 3 OS=Nocardia farcinica
Align length 68
Score (bit) 48.9
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960172|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_L03, 5'
         (652 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5YS08|RNC_NOCFA Ribonuclease 3 OS=Nocardia farcinica GN=rnc ...    49   2e-05
sp|Q82JT9|RNC_STRAW Ribonuclease 3 OS=Streptomyces avermitilis G...    47   7e-05
sp|Q9ZBQ7|RNC_STRCO Ribonuclease 3 OS=Streptomyces coelicolor GN...    47   9e-05
sp|Q47S78|RNC_THEFY Ribonuclease 3 OS=Thermobifida fusca (strain...    46   2e-04
sp|Q2GFE4|RNC_EHRCR Ribonuclease 3 OS=Ehrlichia chaffeensis (str...    45   3e-04
sp|Q5GTI3|RNC_WOLTR Ribonuclease 3 OS=Wolbachia sp. subsp. Brugi...    45   4e-04
sp|Q73FT3|RNC_WOLPM Ribonuclease 3 OS=Wolbachia pipientis wMel G...    45   4e-04
sp|Q3YQX7|RNC_EHRCJ Ribonuclease 3 OS=Ehrlichia canis (strain Ja...    44   6e-04
sp|O69469|RNC_MYCLE Ribonuclease 3 OS=Mycobacterium leprae GN=rn...    44   0.001
sp|Q6AFJ4|RNC_LEIXX Ribonuclease 3 OS=Leifsonia xyli subsp. xyli...    44   0.001
sp|Q5HA74|RNC_EHRRW Ribonuclease 3 OS=Ehrlichia ruminantium (str...    44   0.001
sp|Q5FGH0|RNC_EHRRG Ribonuclease 3 OS=Ehrlichia ruminantium (str...    44   0.001
sp|A1SSM8|RNC_PSYIN Ribonuclease 3 OS=Psychromonas ingrahamii (s...    42   0.002
sp|Q6NGH3|RNC_CORDI Ribonuclease 3 OS=Corynebacterium diphtheria...    42   0.002
sp|P51833|RNC_BACSU Ribonuclease 3 OS=Bacillus subtilis GN=rnc P...    42   0.004
sp|Q8Z023|RNC_ANASP Ribonuclease 3 OS=Anabaena sp. (strain PCC 7...    41   0.005
sp|Q73NX5|RNC_TREDE Ribonuclease 3 OS=Treponema denticola GN=rnc...    41   0.006
sp|A3QBS7|RNC_SHELP Ribonuclease 3 OS=Shewanella loihica (strain...    41   0.006
sp|Q985A6|RNC_RHILO Ribonuclease 3 OS=Rhizobium loti GN=rnc PE=3...    41   0.006
sp|Q3IDL2|RNC_PSEHT Ribonuclease 3 OS=Pseudoalteromonas haloplan...    41   0.006
sp|P59476|RNC_BUCBP Ribonuclease 3 OS=Buchnera aphidicola subsp....    41   0.006
sp|Q6N6C1|RNC_RHOPA Ribonuclease 3 OS=Rhodopseudomonas palustris...    40   0.008
sp|Q7UGZ7|RNC_RHOBA Ribonuclease 3 OS=Rhodopirellula baltica GN=...    40   0.008
sp|Q3B6L3|RNC_PELLD Ribonuclease 3 OS=Pelodictyon luteolum (stra...    40   0.008
sp|Q3SRB3|RNC_NITWN Ribonuclease 3 OS=Nitrobacter winogradskyi (...    40   0.008
sp|Q9A805|RNC_CAUCR Ribonuclease 3 OS=Caulobacter crescentus GN=...    40   0.008
sp|P66665|RNC_BRUSU Ribonuclease 3 OS=Brucella suis GN=rnc PE=3 ...    40   0.011
sp|B0CKY7|RNC_BRUSI Ribonuclease 3 OS=Brucella suis (strain ATCC...    40   0.011
sp|P66664|RNC_BRUME Ribonuclease 3 OS=Brucella melitensis GN=rnc...    40   0.011
sp|A9MA35|RNC_BRUC2 Ribonuclease 3 OS=Brucella canis (strain ATC...    40   0.011

>sp|Q5YS08|RNC_NOCFA Ribonuclease 3 OS=Nocardia farcinica GN=rnc
           PE=3 SV=1
          Length = 240

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 27/68 (39%), Positives = 36/68 (52%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANT 535
           K  LQE   +  L +P Y ++ +G  H   FTAT  I G  Y  G+  + KEA+ KAA  
Sbjct: 172 KTSLQELTAERGLGVPSYEISSTGPDHDKEFTATTVIGGRAYGQGVGRSKKEAEQKAAGA 231

Query: 536 ALLAICAE 559
           A  A+ AE
Sbjct: 232 AYQALTAE 239



 Score = 33.1 bits (74), Expect = 1.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 95  FKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETF 223
           +K+ LQE   + G   P Y+I+  GP H+  F A   +    +
Sbjct: 171 WKTSLQELTAERGLGVPSYEISSTGPDHDKEFTATTVIGGRAY 213


>sp|Q82JT9|RNC_STRAW Ribonuclease 3 OS=Streptomyces avermitilis
           GN=rnc PE=3 SV=1
          Length = 276

 Score = 47.4 bits (111), Expect = 7e-05
 Identities = 25/65 (38%), Positives = 35/65 (53%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANT 535
           K  LQE      L +P Y +T++G  H   FTA  ++ GV Y  G   + KEA+ +AA +
Sbjct: 176 KTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAES 235

Query: 536 ALLAI 550
           A  AI
Sbjct: 236 AWRAI 240



 Score = 32.0 bits (71), Expect = 2.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 95  FKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTV 208
           +K+ LQE     G   P Y +T  GP HE  F A   V
Sbjct: 175 WKTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARV 212


>sp|Q9ZBQ7|RNC_STRCO Ribonuclease 3 OS=Streptomyces coelicolor
           GN=rnc PE=3 SV=1
          Length = 272

 Score = 47.0 bits (110), Expect = 9e-05
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANT 535
           K  LQE      L +P Y +T++G  H   FTA  ++ GV Y  G   + KEA+ +AA +
Sbjct: 182 KTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAES 241

Query: 536 ALLAICA---ERGGTMEQAFD 589
           A  +I A   ER      A D
Sbjct: 242 AWRSIRAAADERAKATADAVD 262



 Score = 32.0 bits (71), Expect = 2.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 95  FKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTV 208
           +K+ LQE     G   P Y +T  GP HE  F A   V
Sbjct: 181 WKTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARV 218


>sp|Q47S78|RNC_THEFY Ribonuclease 3 OS=Thermobifida fusca (strain
           YX) GN=rnc PE=3 SV=1
          Length = 240

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 26/67 (38%), Positives = 35/67 (52%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANT 535
           K  LQE      L +P Y + +SG  H   F ATV++ G  Y  G   + KEA+ +AA +
Sbjct: 165 KTSLQELTAAELLGVPEYVVEESGPDHQKTFRATVRVAGQTYGSGEGRSKKEAEQQAAES 224

Query: 536 ALLAICA 556
           A  AI A
Sbjct: 225 AWKAIRA 231



 Score = 32.3 bits (72), Expect = 2.2
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 95  FKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFES 229
           +K+ LQE         P Y +   GP H+  F+A V V  +T+ S
Sbjct: 164 WKTSLQELTAAELLGVPEYVVEESGPDHQKTFRATVRVAGQTYGS 208


>sp|Q2GFE4|RNC_EHRCR Ribonuclease 3 OS=Ehrlichia chaffeensis (strain
           Arkansas) GN=rnc PE=3 SV=1
          Length = 226

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVY-TLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAAN 532
           K +LQE  Q  +LP P Y T+ KSG  H+P FT  V+I          +N K A+ KAA+
Sbjct: 156 KTILQELVQGKRLPAPAYHTIDKSGPDHNPTFTVEVRIPSYQAIQATGHNKKLAEQKAAS 215

Query: 533 TAL 541
             L
Sbjct: 216 LML 218


>sp|Q5GTI3|RNC_WOLTR Ribonuclease 3 OS=Wolbachia sp. subsp. Brugia
           malayi (strain TRS) GN=rnc PE=3 SV=1
          Length = 243

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTK-SGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAAN 532
           K  LQE+ QK+KLP+P Y L K +G  HSP FT ++ I+        +++ K A+ KAA 
Sbjct: 171 KTSLQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQKAAE 230

Query: 533 TAL 541
             L
Sbjct: 231 LML 233



 Score = 31.6 bits (70), Expect = 3.8
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 98  KSQLQEYAHKAGWSAPVYDITRE-GPSHEPRFKAVVTVQN 214
           K+ LQE+  K     P Y++ ++ GP+H P F   + ++N
Sbjct: 171 KTSLQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIEN 210


>sp|Q73FT3|RNC_WOLPM Ribonuclease 3 OS=Wolbachia pipientis wMel
           GN=rnc PE=3 SV=1
          Length = 232

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTK-SGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAAN 532
           K  LQE+ QK+KLP+P Y L K +G  H+P FT +V I+        +++ K A+ KAA 
Sbjct: 161 KTSLQEWTQKNKLPLPEYELVKQTGPAHNPEFTISVCIEDYGKVSACASSKKIAEQKAAE 220

Query: 533 TAL 541
             L
Sbjct: 221 LML 223



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 98  KSQLQEYAHKAGWSAPVYDITRE-GPSHEPRFKAVVTVQN 214
           K+ LQE+  K     P Y++ ++ GP+H P F   V +++
Sbjct: 161 KTSLQEWTQKNKLPLPEYELVKQTGPAHNPEFTISVCIED 200


>sp|Q3YQX7|RNC_EHRCJ Ribonuclease 3 OS=Ehrlichia canis (strain Jake)
           GN=rnc PE=3 SV=1
          Length = 226

 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVY-TLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAAN 532
           K +LQE+ Q  +LP P Y  + KSG  H+P+FT  ++I          NN K A+ KAA+
Sbjct: 156 KTILQEFIQGKRLPAPTYHIIDKSGPDHNPIFTVELRIPLYKTIQATGNNKKLAEQKAAS 215

Query: 533 TAL 541
             L
Sbjct: 216 LML 218


>sp|O69469|RNC_MYCLE Ribonuclease 3 OS=Mycobacterium leprae GN=rnc
           PE=3 SV=1
          Length = 238

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANT 535
           K  LQE      + +P Y +T +G  H   FTA V +    Y  G+ ++ KEA+ KAA+ 
Sbjct: 163 KTSLQELTAARGMGVPSYVVTSTGPDHDKEFTAVVVVMDTEYGSGIGHSKKEAEQKAASA 222

Query: 536 ALLAI 550
           A  A+
Sbjct: 223 AWKAL 227



 Score = 36.6 bits (83), Expect = 0.12
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 95  FKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFES 229
           +K+ LQE     G   P Y +T  GP H+  F AVV V +  + S
Sbjct: 162 WKTSLQELTAARGMGVPSYVVTSTGPDHDKEFTAVVVVMDTEYGS 206


>sp|Q6AFJ4|RNC_LEIXX Ribonuclease 3 OS=Leifsonia xyli subsp. xyli
           GN=rnc PE=3 SV=1
          Length = 237

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 26/72 (36%), Positives = 37/72 (51%)
 Frame = +2

Query: 356 KNLLQEYAQKSKLPIPVYTLTKSGETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANT 535
           K  LQE A       PVYT+  +G  HS  F ATV + G++   G   + K+A++ AA +
Sbjct: 163 KTSLQEAAAHHGAGQPVYTVINTGPDHSKTFHATVDVGGLVTASGEGTSKKQAEMAAALS 222

Query: 536 ALLAICAERGGT 571
           A  A+   R  T
Sbjct: 223 AWTALTNHRART 234



 Score = 32.3 bits (72), Expect = 2.2
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 98  KSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTV 208
           K+ LQE A   G   PVY +   GP H   F A V V
Sbjct: 163 KTSLQEAAAHHGAGQPVYTVINTGPDHSKTFHATVDV 199
tr_hit_id A9TW99
Definition tr|A9TW99|A9TW99_PHYPA Double-stranded RNA binding protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 157
Score (bit) 132.0
E-value 1.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960172|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_L03, 5'
         (652 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TW99|A9TW99_PHYPA Double-stranded RNA binding protein (Frag...   132   1e-29
tr|A7NUL2|A7NUL2_VITVI Chromosome chr18 scaffold_1, whole genome...   126   1e-27
tr|A5BNI8|A5BNI8_VITVI Putative uncharacterized protein OS=Vitis...   126   1e-27
tr|B6TPY5|B6TPY5_MAIZE BcpLH protein OS=Zea mays PE=2 SV=1            119   1e-25
tr|Q9FY36|Q9FY36_BRAOC RBP2 protein OS=Brassica oleracea var. ca...   119   2e-25
tr|Q8GUQ0|Q8GUQ0_BRAOE DsRNA-binding protein OS=Brassica olerace...   118   3e-25
tr|Q8GUP8|Q8GUP8_BRAOL DsRNA-binding protein OS=Brassica olerace...   118   3e-25
tr|Q8GUP7|Q8GUP7_BRAOT DsRNA-binding protein OS=Brassica olerace...   118   3e-25
tr|Q8GUP6|Q8GUP6_BRAOG DsRNA-binding protein OS=Brassica olerace...   118   3e-25
tr|Q0IV63|Q0IV63_ORYSJ Os11g0109900 protein OS=Oryza sativa subs...   118   3e-25
tr|Q8GUQ1|Q8GUQ1_BRARA DsRNA-binding protein OS=Brassica rapa GN...   118   4e-25
tr|Q9LEQ0|Q9LEQ0_BRACM BcpLH protein OS=Brassica campestris GN=B...   117   5e-25
tr|Q5IZK6|Q5IZK6_BRANA DsRNA-binding protein LH-c OS=Brassica na...   117   5e-25
tr|Q4ZH87|Q4ZH87_ORYSJ DsRNA binding protein RBP OS=Oryza sativa...   117   8e-25
tr|Q0IQN6|Q0IQN6_ORYSJ Os12g0109900 protein OS=Oryza sativa subs...   117   8e-25
tr|Q5IZK7|Q5IZK7_BRAOC DsRNA-binding protein LH2 OS=Brassica ole...   116   1e-24
tr|Q5IZK5|Q5IZK5_BRANA DsRNA-binding protein LH2-o OS=Brassica n...   116   1e-24
tr|Q5IZK8|Q5IZK8_BRAOC DsRNA-binding protein LH1 OS=Brassica ole...   115   2e-24
tr|Q5IZK9|Q5IZK9_BRARC DsRNA-binding protein LH OS=Brassica rapa...   115   2e-24
tr|Q8GUP9|Q8GUP9_BRAOB DsRNA-binding protein OS=Brassica olerace...   115   3e-24
tr|Q0DJA3|Q0DJA3_ORYSJ Os05g0307400 protein OS=Oryza sativa subs...   114   5e-24
tr|O04492|O04492_ARATH F21M12.9 protein (Putative uncharacterize...   111   4e-23
tr|B4G062|B4G062_MAIZE Putative uncharacterized protein OS=Zea m...   111   4e-23
tr|A9T6H7|A9T6H7_PHYPA Double-stranded RNA binding protein OS=Ph...   110   6e-23
tr|Q0DKP4|Q0DKP4_ORYSJ Os05g0150400 protein OS=Oryza sativa subs...   109   1e-22
tr|Q9AV50|Q9AV50_ORYSJ Os10g0480500 protein OS=Oryza sativa subs...   108   2e-22
tr|A9T6E4|A9T6E4_PHYPA Double-stranded RNA binding protein OS=Ph...   108   2e-22
tr|A7Q5S5|A7Q5S5_VITVI Chromosome chr14 scaffold_54, whole genom...   107   5e-22
tr|Q1EPG5|Q1EPG5_MUSAC Double-stranded RNA-binding (DsRBD) domai...   107   8e-22
tr|A5AMX8|A5AMX8_VITVI Putative uncharacterized protein OS=Vitis...   107   8e-22

>tr|A9TW99|A9TW99_PHYPA Double-stranded RNA binding protein
           (Fragment) OS=Physcomitrella patens subsp. patens
           GN=DRB1501 PE=4 SV=1
          Length = 151

 Score =  132 bits (333), Expect = 1e-29
 Identities = 77/157 (49%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           M+KSQLQEYA K G  +P Y+  +EG SHEPRFK+ V V    +ES   Y          
Sbjct: 1   MYKSQLQEYAQKQGLMSPSYEYVKEGASHEPRFKSTVWVNGRGYESAPGYPTLRSAEHAA 60

Query: 272 XXXXXXXFSARPELQKPFSN--PLHESGLCKNLLQEYAQKSKLPIPVYTLTKSGETHSPM 445
                   +A   LQK      P+HESGLCKNLLQE+AQK   P+P Y   + GE HS +
Sbjct: 61  AK------AALDFLQKTQFKVVPVHESGLCKNLLQEFAQKHGYPLPQYKSVRQGEEHSLV 114

Query: 446 FTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICA 556
           F++TV+I GV Y GG + + KEA+IKAA TALLAI A
Sbjct: 115 FSSTVEIAGVSYSGGCAKSKKEAEIKAARTALLAIQA 151



 Score = 38.5 bits (88), Expect = 0.36
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +2

Query: 17  AAGVSRLETL--TQLRVVPNLSTEELAMFKSQLQEYAHKAGWSAPVYDITREGPSHEPRF 190
           AA  + L+ L  TQ +VVP     E  + K+ LQE+A K G+  P Y   R+G  H   F
Sbjct: 59  AAAKAALDFLQKTQFKVVP---VHESGLCKNLLQEFAQKHGYPLPQYKSVRQGEEHSLVF 115

Query: 191 KAVVTVQNETF 223
            + V +   ++
Sbjct: 116 SSTVEIAGVSY 126


>tr|A7NUL2|A7NUL2_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015092001
           PE=4 SV=1
          Length = 394

 Score =  126 bits (317), Expect = 1e-27
 Identities = 69/168 (41%), Positives = 93/168 (55%), Gaps = 1/168 (0%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA K G   P+YD  +EGP H P FK+ V V +  ++S   + N        
Sbjct: 9   VFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDSLPGFSNRKAAEQSA 68

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTK-SGETHSPMF 448
                   +    +++  S P+HE+GLCKNLLQEYAQK    IP+Y   K      +  F
Sbjct: 69  AEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMYVCQKDESPGRAASF 128

Query: 449 TATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDN 592
           + TV+I G+ Y G  +   KEA+IKAA TALLAI A   G  E++  N
Sbjct: 129 SCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRANTDGVGEKSIGN 176


>tr|A5BNI8|A5BNI8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043706 PE=4 SV=1
          Length = 400

 Score =  126 bits (317), Expect = 1e-27
 Identities = 69/168 (41%), Positives = 93/168 (55%), Gaps = 1/168 (0%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA K G   P+YD  +EGP H P FK+ V V +  ++S   + N        
Sbjct: 15  VFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDSLPGFSNRKAAEQSA 74

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTK-SGETHSPMF 448
                   +    +++  S P+HE+GLCKNLLQEYAQK    IP+Y   K      +  F
Sbjct: 75  AEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMYVCQKDESPGRAASF 134

Query: 449 TATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDN 592
           + TV+I G+ Y G  +   KEA+IKAA TALLAI A   G  E++  N
Sbjct: 135 SCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRANTDGVGEKSIGN 182


>tr|B6TPY5|B6TPY5_MAIZE BcpLH protein OS=Zea mays PE=2 SV=1
          Length = 434

 Score =  119 bits (299), Expect = 1e-25
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
 Frame = +2

Query: 71  LSTEELAMFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFES-PAFYGN 247
           +  E   +FKS+LQEYA + G   P Y   +EGPSHEP FK+ V V N  +ES P F+  
Sbjct: 30  IRVENCYVFKSRLQEYAQRVGIPTPEYHTLKEGPSHEPVFKSTVFVNNTKYESLPGFFSR 89

Query: 248 XXXXXXXXXXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSG 427
                            + P  +      + E+GLCKNLLQEYAQK    IP Y  TK  
Sbjct: 90  KAAEQSAAEVALMEIAMSAPVTEIRNMPAVQETGLCKNLLQEYAQKMNYAIPSYICTKQA 149

Query: 428 ETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGG 568
              +P F  +V+I G+LY G  +   KEA+IKAA TALLAI ++  G
Sbjct: 150 SGVAP-FVCSVEIGGILYIGAAARTKKEAEIKAARTALLAIQSQSEG 195


>tr|Q9FY36|Q9FY36_BRAOC RBP2 protein OS=Brassica oleracea var.
           capitata GN=rbp2 PE=2 SV=1
          Length = 283

 Score =  119 bits (298), Expect = 2e-25
 Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA K     P+Y+  +EGPSH+  F++ V V    ++S   + N        
Sbjct: 15  VFKSRLQEYAQKYKLPTPIYETVKEGPSHKSLFQSTVIVDGVRYDSLPGFFNRKAAEQSA 74

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSGET--HSPM 445
                   S   EL +  S P+HE GLCKNLLQEYAQK    IP+Y   KS ET   +P 
Sbjct: 75  AEVALQELSKSTELGQCVSLPVHEMGLCKNLLQEYAQKMNYAIPLYQCQKS-ETLGRAPQ 133

Query: 446 FTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDNHLAALGQEAPA 625
           FT TV+I G+ Y G  +   KEA+I A  TAL+AI +E    +   +   L  L  E   
Sbjct: 134 FTCTVEIGGIKYTGAATKTKKEAEISAGRTALIAIQSESKIDLANNYSTQLTVLPCEKKT 193

Query: 626 PPVA 637
             VA
Sbjct: 194 VEVA 197


>tr|Q8GUQ0|Q8GUQ0_BRAOE DsRNA-binding protein OS=Brassica oleracea
           var. acephala GN=lh PE=2 SV=1
          Length = 283

 Score =  118 bits (296), Expect = 3e-25
 Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA +     P+Y+  +EGPSH+P F++ V V +  ++S   + N        
Sbjct: 15  VFKSRLQEYAQRYKLPTPLYEAIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSGET--HSPM 445
                   +   +L +  S P+HE GLCKNLLQEYAQK    IP+Y   +S ET   +P 
Sbjct: 75  AEVALQELAKSSDLTQSVSLPVHEMGLCKNLLQEYAQKMNYAIPLYQCQRS-ETLGRAPQ 133

Query: 446 FTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDNHLAALGQEAPA 625
           FT TV+I G+ Y G  +   KEA+I A  TAL+AI +E    +   + + L  L  E   
Sbjct: 134 FTCTVEIGGIKYTGAATKTKKEAEISAGRTALIAIQSESKIDLANNYSSQLTVLPCEKKT 193

Query: 626 PPVA 637
             VA
Sbjct: 194 VEVA 197


>tr|Q8GUP8|Q8GUP8_BRAOL DsRNA-binding protein OS=Brassica oleracea
           var. gongylodes GN=lh PE=2 SV=1
          Length = 283

 Score =  118 bits (296), Expect = 3e-25
 Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA +     P+Y+  +EGPSH+P F++ V V +  ++S   + N        
Sbjct: 15  VFKSRLQEYAQRYKLPTPLYEAIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSGET--HSPM 445
                   +   +L +  S P+HE GLCKNLLQEYAQK    IP+Y   +S ET   +P 
Sbjct: 75  AEVALQELAKSSDLTQSVSLPVHEMGLCKNLLQEYAQKMNYAIPLYQCQRS-ETLGRAPQ 133

Query: 446 FTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDNHLAALGQEAPA 625
           FT TV+I G+ Y G  +   KEA+I A  TAL+AI +E    +   + + L  L  E   
Sbjct: 134 FTCTVEIGGIKYTGAATKTKKEAEISAGRTALIAIQSESKIDLANNYSSQLTVLPCEKKT 193

Query: 626 PPVA 637
             VA
Sbjct: 194 VEVA 197


>tr|Q8GUP7|Q8GUP7_BRAOT DsRNA-binding protein OS=Brassica oleracea
           var. italica GN=lh PE=2 SV=1
          Length = 283

 Score =  118 bits (296), Expect = 3e-25
 Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA +     P+Y+  +EGPSH+P F++ V V +  ++S   + N        
Sbjct: 15  VFKSRLQEYAQRYKLPTPLYEAIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSGET--HSPM 445
                   +   +L +  S P+HE GLCKNLLQEYAQK    IP+Y   +S ET   +P 
Sbjct: 75  AEVALQELAKSSDLTQSVSLPVHEMGLCKNLLQEYAQKMNYAIPLYQCQRS-ETLGRAPQ 133

Query: 446 FTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDNHLAALGQEAPA 625
           FT TV+I G+ Y G  +   KEA+I A  TAL+AI +E    +   + + L  L  E   
Sbjct: 134 FTCTVEIGGIKYTGAATKTKKEAEISAGRTALIAIQSESKIDLANNYSSQLTVLPCEKKT 193

Query: 626 PPVA 637
             VA
Sbjct: 194 VEVA 197


>tr|Q8GUP6|Q8GUP6_BRAOG DsRNA-binding protein OS=Brassica oleracea
           var. gemmifera GN=lh PE=2 SV=1
          Length = 283

 Score =  118 bits (296), Expect = 3e-25
 Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
 Frame = +2

Query: 92  MFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFESPAFYGNXXXXXXXX 271
           +FKS+LQEYA +     P+Y+  +EGPSH+P F++ V V +  ++S   + N        
Sbjct: 15  VFKSRLQEYAQRYKLPTPLYEAIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSA 74

Query: 272 XXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSGET--HSPM 445
                   +   +L +  S P+HE GLCKNLLQEYAQK    IP+Y   +S ET   +P 
Sbjct: 75  AEVALQELAKSSDLTQSVSLPVHEMGLCKNLLQEYAQKMNYAIPLYQCQRS-ETLGRAPQ 133

Query: 446 FTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQAFDNHLAALGQEAPA 625
           FT TV+I G+ Y G  +   KEA+I A  TAL+AI +E    +   + + L  L  E   
Sbjct: 134 FTCTVEIGGIKYTGAATKTKKEAEISAGRTALIAIQSESKIDLANNYSSQLTVLPCEKKT 193

Query: 626 PPVA 637
             VA
Sbjct: 194 VEVA 197


>tr|Q0IV63|Q0IV63_ORYSJ Os11g0109900 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0109900 PE=2 SV=1
          Length = 473

 Score =  118 bits (296), Expect = 3e-25
 Identities = 71/172 (41%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
 Frame = +2

Query: 71  LSTEELAMFKSQLQEYAHKAGWSAPVYDITREGPSHEPRFKAVVTVQNETFES-PAFYGN 247
           +  E   +FKS+LQEYA KAG   P Y   +EGPSHEP FK+ V + N +++S P F+  
Sbjct: 26  IRVENCYVFKSRLQEYAQKAGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNR 85

Query: 248 XXXXXXXXXXXXXXXFSARPELQKPFSNPLHESGLCKNLLQEYAQKSKLPIPVYTLTKSG 427
                            + P         + E+GLCKNLLQEYAQK    IP Y  TKS 
Sbjct: 86  KAAEQSAAEVALMEIVKSIP--ANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKSA 143

Query: 428 ETHSPMFTATVKIDGVLY*GGLSNNNKEADIKAANTALLAICAERGGTMEQA 583
              +P F  TV+I G+ Y G  +   K+A+IKAA TALLAI  +  G+   A
Sbjct: 144 SGLAP-FICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGA 194