DK960187
Clone id TST39A01NGRL0006_L20
Library
Length 655
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_L20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGGAGGGTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTTCTTCAAGCACCTT
CGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGGTAGGCAATGTGGG
CGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATGG
CCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGGG
AGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCTT
CGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGG
CTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTT
CAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCT
CGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCATGGGCGCTGT
TGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCATCTACCCTGG
TGGCTCCTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCATTTGCTGAGCTG
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 188
Score (bit) 348.0
E-value 1.0e-95
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960187|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_L20, 5'
(655 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 348 1e-95
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 345 9e-95
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 345 2e-94
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 345 2e-94
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 344 2e-94
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 343 6e-94
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 343 6e-94
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 342 8e-94
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 342 8e-94
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 342 1e-93
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 342 1e-93
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 342 1e-93
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 342 1e-93
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 340 4e-93
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 340 5e-93
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 338 1e-92
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 338 1e-92
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 338 1e-92
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 338 2e-92
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 338 2e-92
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 337 3e-92
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 337 3e-92
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop... 337 3e-92
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 337 3e-92
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 336 6e-92
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 335 1e-91
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 335 1e-91
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 335 1e-91
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 335 2e-91
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 334 2e-91

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 348 bits (893), Expect = 1e-95
Identities = 164/188 (87%), Positives = 176/188 (93%), Gaps = 4/188 (2%)
Frame = +2

Query: 104 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 271
KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 272 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 451
AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 452 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 631
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 632 DPEAFAEL 655
DPEAFAEL
Sbjct: 199 DPEAFAEL 206


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 345 bits (886), Expect = 9e-95
Identities = 170/200 (85%), Positives = 185/200 (92%), Gaps = 3/200 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 235
GQ++ KP +ELS KV GNV EARV+MR+TVSKS SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 236 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 415
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73 NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 416 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 595
WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 596 PGGSFDPLGLADDPEAFAEL 655
PGGSFDPLGLADDP+ FAEL
Sbjct: 193 PGGSFDPLGLADDPDTFAEL 212



Score = 30.8 bits (68), Expect = 6.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2

Query: 245 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 394
+PG +D GL+ DP+TFA+ + E+ + R AM G ++ G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 345 bits (884), Expect = 2e-94
Identities = 172/193 (89%), Positives = 175/193 (90%), Gaps = 1/193 (0%)
Frame = +2

Query: 80 KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 256
KP +ELS KVG GEARV M SK+ S S WYG DR YLGPFSG PSYL GEFPGD
Sbjct: 18 KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 257 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 436
YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 437 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 616
IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 617 LGLADDPEAFAEL 655
LGLADDPEAFAEL
Sbjct: 197 LGLADDPEAFAEL 209


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
Length = 265

Score = 345 bits (884), Expect = 2e-94
Identities = 165/181 (91%), Positives = 172/181 (95%), Gaps = 2/181 (1%)
Frame = +2

Query: 119 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 292
G RVSMRKTV+K +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29 GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 293 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 472
ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 473 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 652
PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAE
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAE 208

Query: 653 L 655
L
Sbjct: 209 L 209


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 267

Score = 344 bits (883), Expect = 2e-94
Identities = 163/184 (88%), Positives = 171/184 (92%), Gaps = 4/184 (2%)
Frame = +2

Query: 116 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 283
+GE R++MRKT K S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28 IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 284 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 463
ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 464 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 643
LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207

Query: 644 FAEL 655
FAEL
Sbjct: 208 FAEL 211


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267

Score = 343 bits (879), Expect = 6e-94
Identities = 163/183 (89%), Positives = 171/183 (93%), Gaps = 4/183 (2%)
Frame = +2

Query: 119 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 286
G RV+MRKT +K SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 287 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 466
DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 467 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 646
GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 208

Query: 647 AEL 655
AEL
Sbjct: 209 AEL 211


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255

Score = 343 bits (879), Expect = 6e-94
Identities = 163/181 (90%), Positives = 171/181 (94%), Gaps = 2/181 (1%)
Frame = +2

Query: 119 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 292
G A+ +MRKT SKS S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 19 GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 293 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 472
ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 79 ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 473 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 652
PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFAE
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAE 198

Query: 653 L 655
L
Sbjct: 199 L 199


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
Length = 265

Score = 342 bits (878), Expect = 8e-94
Identities = 167/200 (83%), Positives = 179/200 (89%), Gaps = 3/200 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 235
GQAV +LS + G R++MRK V+KS S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15 GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 236 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 415
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 416 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 595
WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 596 PGGSFDPLGLADDPEAFAEL 655
PGGSFDPLGLA+DPEAFAEL
Sbjct: 190 PGGSFDPLGLAEDPEAFAEL 209


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
Length = 266

Score = 342 bits (878), Expect = 8e-94
Identities = 168/201 (83%), Positives = 177/201 (88%), Gaps = 4/201 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 232
G+AV P S + G + +MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 15 GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 233 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 412
L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA
Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 413 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 592
VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189

Query: 593 YPGGSFDPLGLADDPEAFAEL 655
YPGGSFDPLGLADDPEAFAEL
Sbjct: 190 YPGGSFDPLGLADDPEAFAEL 210


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
Length = 267

Score = 342 bits (877), Expect = 1e-93
Identities = 163/183 (89%), Positives = 170/183 (92%), Gaps = 4/183 (2%)
Frame = +2

Query: 119 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 286
G + MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA
Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88

Query: 287 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 466
DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 467 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 646
GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 208

Query: 647 AEL 655
AEL
Sbjct: 209 AEL 211


tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 197
Score (bit) 357.0
E-value 5.0e-97
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960187|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_L20, 5'
(655 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 357 5e-97
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 353 4e-96
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 352 9e-96
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 352 9e-96
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 352 1e-95
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 351 2e-95
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 348 1e-94
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 348 2e-94
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 348 2e-94
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ... 347 5e-94
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 347 5e-94
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 346 6e-94
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ... 345 1e-93
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 345 1e-93
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 345 1e-93
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ... 345 1e-93
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 345 1e-93
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 345 1e-93
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome... 345 1e-93
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC... 345 1e-93
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 345 2e-93
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 344 2e-93
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC... 344 2e-93
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 344 3e-93
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 344 3e-93
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 343 4e-93
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 343 4e-93
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 343 4e-93
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 343 5e-93

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
Length = 265

Score = 357 bits (915), Expect = 5e-97
Identities = 173/197 (87%), Positives = 183/197 (92%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 244
GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14 GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 245 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 424
F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73 FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 425 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 604
AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 605 SFDPLGLADDPEAFAEL 655
SFDPLGLADDP+ FAEL
Sbjct: 193 SFDPLGLADDPDTFAEL 209


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
Length = 270

Score = 353 bits (907), Expect = 4e-96
Identities = 172/202 (85%), Positives = 184/202 (91%), Gaps = 5/202 (2%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 229
GQ V KPQ+E VG V GE R++MRKT SK SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16 GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 230 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 409
YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 410 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 589
AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 590 IYPGGSFDPLGLADDPEAFAEL 655
IYPGGSFDPLGLADDP+AFAEL
Sbjct: 193 IYPGGSFDPLGLADDPDAFAEL 214


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 352 bits (904), Expect = 9e-96
Identities = 173/199 (86%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 238
GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL
Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 194 GGSFDPLGLADDPDTFAEL 212


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 352 bits (904), Expect = 9e-96
Identities = 173/199 (86%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 238
GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL
Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 194 GGSFDPLGLADDPDTFAEL 212


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 352 bits (902), Expect = 1e-95
Identities = 172/199 (86%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 238
GQ V KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
Length = 267

Score = 351 bits (901), Expect = 2e-95
Identities = 171/199 (85%), Positives = 185/199 (92%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 238
GQ++ KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 348 bits (894), Expect = 1e-94
Identities = 170/199 (85%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 238
GQ++ KP +ELS KVG+ +ARV+MR+TV+KS SDS WYG DR KYLGPFSGE PSYL
Sbjct: 14 GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 348 bits (894), Expect = 1e-94
Identities = 172/199 (86%), Positives = 183/199 (91%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 238
GQ++ KP +ELS KVGNV EARVSMRK+ SKS SDS WYG DR KYLGPFSGE PSYL
Sbjct: 14 GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
mays PE=2 SV=1
Length = 262

Score = 348 bits (893), Expect = 2e-94
Identities = 164/188 (87%), Positives = 176/188 (93%), Gaps = 4/188 (2%)
Frame = +2

Query: 104 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 271
KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 272 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 451
AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 452 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 631
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 632 DPEAFAEL 655
DPEAFAEL
Sbjct: 199 DPEAFAEL 206


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
Length = 267

Score = 348 bits (892), Expect = 2e-94
Identities = 167/199 (83%), Positives = 186/199 (93%), Gaps = 2/199 (1%)
Frame = +2

Query: 65 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 238
GQ++++P +ELS KVGNV ++RV+MR+TV+KS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 239 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 418
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 419 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 598
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 599 GGSFDPLGLADDPEAFAEL 655
GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211