DK960190 |
Clone id |
TST39A01NGRL0006_L23 |
Library |
TST39 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_L23. 5' end sequence. |
Accession |
DK960190 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1379Contig1 |
Sequence |
GAGACGGTCACCAGCGAGGCGGCACAACCACTGTTCGAGGCTGCGGCATGCTATGTTCCA AGAGGTGGCCGCACTGGCCGTCTTTTTACGACGTCGAGTTCACATGTGTGCTGCAAGAAA AAGAGTACCTTTGGAAGAGGGCAGCAATAAAGATGTTTTCTGTGAGCGGTTACATGCAGC GTTTGAGTGGGCAAGAAATCAGTATGAGCTTGCTGGGACAAAATATGAGCAGGCTCTGTC TGTGAAGCCAGATTTCTATGAAGGGGTTCTTGCACTTGGGCAGGAGAGTTTTGAGAGTGC AAAGCTGAGATGGTCCCTTGCAATGGCAAGTAAAGTCGATTTGAAAATTTGGGACTCATC TGAGACTATTGCACTCTTTAAGCAAGCTGAAGACAGGATGAAAGTAGCTGTCGATCTGTG GGAGAAGCTCGAAGAGCGGCGCCTTAGAGAAGCCTCAAGCTCTGCTTGCAAAAGGGATGG GCTCAAACTTGATACATGCAGCAGGCACGATAATTGCCAGGAGCTGTCTGAGGCTGAGAC TCAGGAGCAATTACGTGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40190 |
Definition |
sp|P40190|IL6RB_RAT Interleukin-6 receptor subunit beta OS=Rattus norvegicus |
Align length |
56 |
Score (bit) |
33.5 |
E-value |
0.73 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6K464 |
Definition |
tr|Q6K464|Q6K464_ORYSJ Os09g0135400 protein OS=Oryza sativa subsp. japonica |
Align length |
126 |
Score (bit) |
164.0 |
E-value |
4.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960190|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_L23, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6K464|Q6K464_ORYSJ Os09g0135400 protein OS=Oryza sativa subs... 164 4e-39 tr|A3BWB0|A3BWB0_ORYSJ Putative uncharacterized protein OS=Oryza... 164 4e-39 tr|A2YYR3|A2YYR3_ORYSI Putative uncharacterized protein OS=Oryza... 164 4e-39 tr|A7R257|A7R257_VITVI Chromosome undetermined scaffold_404, who... 161 3e-38 tr|Q56W52|Q56W52_ARATH Putative uncharacterized protein At1g6239... 159 1e-37 tr|P92988|P92988_ARATH Putative cytoskeletal protein OS=Arabidop... 159 1e-37 tr|O48802|O48802_ARATH F2401.12 (Putative uncharacterized protei... 159 1e-37 tr|B4F8M5|B4F8M5_MAIZE Putative uncharacterized protein OS=Zea m... 155 1e-36 tr|O49385|O49385_ARATH Putative uncharacterized protein F10N7.12... 124 3e-27 tr|Q0IZQ4|Q0IZQ4_ORYSJ Os09g0556200 protein OS=Oryza sativa subs... 123 8e-27 tr|A3C1D8|A3C1D8_ORYSJ Putative uncharacterized protein OS=Oryza... 123 8e-27 tr|A2Z3Y3|A2Z3Y3_ORYSI Putative uncharacterized protein OS=Oryza... 123 8e-27 tr|A7P620|A7P620_VITVI Chromosome chr4 scaffold_6, whole genome ... 120 5e-26 tr|Q69QX2|Q69QX2_ORYSJ cDNA clone:J033046B22, full insert sequen... 119 1e-25 tr|Q0J6M3|Q0J6M3_ORYSJ Os08g0296900 protein (Fragment) OS=Oryza ... 119 1e-25 tr|A3BRP8|A3BRP8_ORYSJ Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A2YTN6|A2YTN6_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A2YTN2|A2YTN2_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|Q6K378|Q6K378_ORYSJ Tetratricopeptide repeat protein-like (Pu... 115 4e-25 tr|A2YYL8|A2YYL8_ORYSI Putative uncharacterized protein OS=Oryza... 115 4e-25 tr|Q2HTI5|Q2HTI5_MEDTR Octicosapeptide/Phox/Bem1p OS=Medicago tr... 116 7e-25 tr|Q9SIR4|Q9SIR4_ARATH Putative uncharacterized protein At2g2529... 115 2e-24 tr|A7QTK8|A7QTK8_VITVI Chromosome chr11 scaffold_170, whole geno... 101 9e-22 tr|Q3E9A2|Q3E9A2_ARATH Uncharacterized protein At5g20360.1 OS=Ar... 93 9e-18 tr|Q8RWK1|Q8RWK1_ARATH Putative uncharacterized protein At1g6239... 67 9e-10 tr|Q01FS0|Q01FS0_OSTTA Molecular co-chaperone STI1 (ISS) OS=Ostr... 59 2e-07 tr|A4RRV0|A4RRV0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 47 5e-04 tr|Q6DT61|Q6DT61_ARALP AT1G62390 (Fragment) OS=Arabidopsis lyrat... 46 0.002 tr|Q01GG8|Q01GG8_OSTTA Octicosapeptide/Phox/Bem1p (ISS) OS=Ostre... 42 0.017 tr|A4RR59|A4RR59_OSTLU Predicted protein OS=Ostreococcus lucimar... 41 0.039
>tr|Q6K464|Q6K464_ORYSJ Os09g0135400 protein OS=Oryza sativa subsp. japonica GN=P0006E02.16 PE=4 SV=1 Length = 544
Score = 164 bits (414), Expect = 4e-39 Identities = 76/126 (60%), Positives = 97/126 (76%) Frame = +2
Query: 50 AMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYE 229 A FQEVAALA+F VHMCAARKR+PL+E + K V +L A++W R++Y LAG+KYE Sbjct: 285 AKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYE 344
Query: 230 QALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVA 409 +AL +KPDFYEG+LALGQ+ FE+AKL WS A+A KVDL WDSS+T LF AE +M+ A Sbjct: 345 EALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAA 404
Query: 410 VDLWEK 427 ++WEK Sbjct: 405 TEMWEK 410
>tr|A3BWB0|A3BWB0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027332 PE=4 SV=1 Length = 787
Score = 164 bits (414), Expect = 4e-39 Identities = 76/126 (60%), Positives = 97/126 (76%) Frame = +2
Query: 50 AMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYE 229 A FQEVAALA+F VHMCAARKR+PL+E + K V +L A++W R++Y LAG+KYE Sbjct: 528 AKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYE 587
Query: 230 QALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVA 409 +AL +KPDFYEG+LALGQ+ FE+AKL WS A+A KVDL WDSS+T LF AE +M+ A Sbjct: 588 EALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAA 647
Query: 410 VDLWEK 427 ++WEK Sbjct: 648 TEMWEK 653
>tr|A2YYR3|A2YYR3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30481 PE=4 SV=1 Length = 787
Score = 164 bits (414), Expect = 4e-39 Identities = 76/126 (60%), Positives = 97/126 (76%) Frame = +2
Query: 50 AMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYE 229 A FQEVAALA+F VHMCAARKR+PL+E + K V +L A++W R++Y LAG+KYE Sbjct: 528 AKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYE 587
Query: 230 QALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVA 409 +AL +KPDFYEG+LALGQ+ FE+AKL WS A+A KVDL WDSS+T LF AE +M+ A Sbjct: 588 EALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAA 647
Query: 410 VDLWEK 427 ++WEK Sbjct: 648 TEMWEK 653
>tr|A7R257|A7R257_VITVI Chromosome undetermined scaffold_404, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012823001 PE=4 SV=1 Length = 297
Score = 161 bits (407), Expect = 3e-38 Identities = 75/124 (60%), Positives = 94/124 (75%) Frame = +2
Query: 56 FQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYEQA 235 FQEVAALA F VHMCAARKR+PL+E + KDV +L A++W R +Y LA KYE+A Sbjct: 126 FQEVAALAFFNWGNVHMCAARKRIPLDESAAKDVMATQLQVAYDWVREKYTLAREKYEEA 185
Query: 236 LSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVAVD 415 L +KPDFYEG+LALGQ+ FE AKL WS A+A K+DL WD++ETI LF AE++MK A + Sbjct: 186 LLIKPDFYEGLLALGQQQFEMAKLHWSFALAKKLDLSGWDATETIKLFDSAEEKMKAATE 245
Query: 416 LWEK 427 +WEK Sbjct: 246 MWEK 249
>tr|Q56W52|Q56W52_ARATH Putative uncharacterized protein At1g62390 (Fragment) OS=Arabidopsis thaliana GN=At1g62390 PE=2 SV=1 Length = 359
Score = 159 bits (401), Expect = 1e-37 Identities = 75/126 (59%), Positives = 93/126 (73%) Frame = +2
Query: 50 AMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYE 229 A FQEVAALA F VHMCAARKR+PL+E + K+V +L A+EW + +Y LA KYE Sbjct: 110 AKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVAAQLQTAYEWVKERYTLAKEKYE 169
Query: 230 QALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVA 409 QALS+KPDFYEG+LALGQ+ FE AKL WS +A K+D+ WD SET+ LF AE +MK A Sbjct: 170 QALSIKPDFYEGLLALGQQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDA 229
Query: 410 VDLWEK 427 ++WEK Sbjct: 230 TEMWEK 235
>tr|P92988|P92988_ARATH Putative cytoskeletal protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 782
Score = 159 bits (401), Expect = 1e-37 Identities = 75/126 (59%), Positives = 93/126 (73%) Frame = +2
Query: 50 AMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYE 229 A FQEVAALA F VHMCAARKR+PL+E + K+V +L A+EW + +Y LA KYE Sbjct: 503 AKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVAAQLQTAYEWVKERYTLAKEKYE 562
Query: 230 QALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVA 409 QALS+KPDFYEG+LALGQ+ FE AKL WS +A K+D+ WD SET+ LF AE +MK A Sbjct: 563 QALSIKPDFYEGLLALGQQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDA 622
Query: 410 VDLWEK 427 ++WEK Sbjct: 623 TEMWEK 628
>tr|O48802|O48802_ARATH F2401.12 (Putative uncharacterized protein At1g62390) OS=Arabidopsis thaliana GN=At1g62390 PE=2 SV=1 Length = 751
Score = 159 bits (401), Expect = 1e-37 Identities = 75/126 (59%), Positives = 93/126 (73%) Frame = +2
Query: 50 AMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYE 229 A FQEVAALA F VHMCAARKR+PL+E + K+V +L A+EW + +Y LA KYE Sbjct: 502 AKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVAAQLQTAYEWVKERYTLAKEKYE 561
Query: 230 QALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVA 409 QALS+KPDFYEG+LALGQ+ FE AKL WS +A K+D+ WD SET+ LF AE +MK A Sbjct: 562 QALSIKPDFYEGLLALGQQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDA 621
Query: 410 VDLWEK 427 ++WEK Sbjct: 622 TEMWEK 627
>tr|B4F8M5|B4F8M5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 507
Score = 155 bits (392), Expect = 1e-36 Identities = 81/174 (46%), Positives = 104/174 (59%), Gaps = 1/174 (0%) Frame = +2
Query: 41 LRHAMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGT 220 L + FQEVAALA+F VHMC ARKR+PL+E + K+V +L A+ W + +Y LAG Sbjct: 243 LAASKFQEVAALALFNWGNVHMCEARKRIPLDESAPKEVMAAQLRTAYYWVKERYALAGH 302
Query: 221 KYEQALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRM 400 KYE+AL +KPDF+EG+LALGQ+ FE+AKL WS A+A K DL WDS ET LF AE M Sbjct: 303 KYEEALKIKPDFHEGLLALGQQHFETAKLHWSYALADKADLSTWDSLETFKLFDSAEQNM 362
Query: 401 KVAVDLWEK-XXXXXXXXXXXXXCKRDGLKLDTCSRHDNCQELSEAETQEQLRV 559 + A ++WEK C +DG+ EL+ E EQ V Sbjct: 363 RAATEMWEKVEEQRMAELKEPGACDKDGVLRKRQHGAGGQPELTPEEAAEQAAV 416
>tr|O49385|O49385_ARATH Putative uncharacterized protein F10N7.120 (Putative uncharacterized protein AT4g32070) OS=Arabidopsis thaliana GN=F10N7.120 PE=2 SV=1 Length = 811
Score = 124 bits (311), Expect = 3e-27 Identities = 74/176 (42%), Positives = 101/176 (57%), Gaps = 11/176 (6%) Frame = +2
Query: 56 FQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAGTKYEQA 235 FQE+ ALA+ VHM ARK+V + E ++++ E + AAF W +N+Y A KYE+A Sbjct: 499 FQEMGALALLNWGNVHMSKARKQVCIPEDASREAIIEAVEAAFVWTQNEYNKAAEKYEEA 558
Query: 236 LSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDRMKVAVD 415 + VKPDFYE +LALGQE FE AKL W A+ SKVDL+ S E + L+ +AED M+ + Sbjct: 559 IKVKPDFYEALLALGQEQFEHAKLCWYHALKSKVDLESEASQEVLKLYNKAEDSMERGMQ 618
Query: 416 LWEKXXXXXXXXXXXXXCKRDGL-KLDTCSRHDNC----------QELSEAETQEQ 550 +WE+ C+ +G+ KLD +H N E SE ET EQ Sbjct: 619 IWEE----------MEECRLNGISKLD---KHKNMLRKLELDELFSEASEEETVEQ 661
>tr|Q0IZQ4|Q0IZQ4_ORYSJ Os09g0556200 protein OS=Oryza sativa subsp. japonica GN=Os09g0556200 PE=4 SV=1 Length = 658
Score = 123 bits (308), Expect = 8e-27 Identities = 60/130 (46%), Positives = 84/130 (64%) Frame = +2
Query: 38 RLRHAMFQEVAALAVFLRRRVHMCAARKRVPLEEGSNKDVFCERLHAAFEWARNQYELAG 217 +L + FQE+AALA F VHM ARKR+ L S ++ E++ A+EWA+ +Y AG Sbjct: 402 QLAESNFQEMAALAFFHWGNVHMSRARKRLLLPGDSPQESVLEQVKEAYEWAKEEYNKAG 461
Query: 218 TKYEQALSVKPDFYEGVLALGQESFESAKLRWSLAMASKVDLKIWDSSETIALFKQAEDR 397 +YE+A+ KP+F+EG LAL + FE AKL W A+ S VDL W SSE + LF +AED Sbjct: 462 RRYEEAVKAKPNFFEGFLALAHQHFEQAKLSWYYAIGSSVDLDTWPSSEVLELFNKAEDN 521
Query: 398 MKVAVDLWEK 427 M+ ++WE+ Sbjct: 522 MERGTEMWEE 531
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