DK960200 |
Clone id |
TST39A01NGRL0006_M09 |
Library |
TST39 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_M09. 5' end sequence. |
Accession |
DK960200 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL64Contig1 |
Sequence |
CTAGTCTGCGTTTTCCTGCGATCGTAGCTCGCCGGGTCAAGCAGCAGCCATGGTGCTTTC TCAAAAGGAAGCCGATATCCAAATGATGCTTGCTGCCGATGTGCACCTCGGCACGAAGAA TTGCGATTTTCAGATGGAGCGTTACGTGTGGAAGCGTCGATCTGACGGAATTTTTATCAT CAATGTAGGAAAAACATGGGACAAGCTGGAGTTGGCAGCGAGAGTGATTGTCGCTATTGA AAATCCTCAGGATATTATTGTTCAATCTGCCAGGCCCTATGGTCAGAGGGCAGTATTAAA ATTCGCTCAATACACTGGTGCTCAGGCGATTGCTGGACGTCACACTCCAGGAACGTTTAC CAATCAGCTTCAGAACACGTTTTGTGAGCCTCGGCTCTTGATTTTGACAGACCCACGTAC TGATCATCAGCCTATCAAAGAGGCTGCGCTTGGAAACATCCCTATAATTGCATTTTGTGA CACAGATTCCCCCATGCGCCATGTGGACATTGGTATCCCTGCTAATAACAAGGGGAAGCA CAGTATCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O22518 |
Definition |
sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max |
Align length |
164 |
Score (bit) |
311.0 |
E-value |
1.0e-84 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P0C9 |
Definition |
tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
164 |
Score (bit) |
313.0 |
E-value |
4.0e-84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960200|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_M09, 5' (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea... 313 4e-84 tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea... 313 5e-84 tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subs... 311 1e-83 tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza... 311 1e-83 tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 311 2e-83 tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza... 310 3e-83 tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medic... 309 5e-83 tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 309 5e-83 tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella paten... 309 7e-83 tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella paten... 309 7e-83 tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 308 9e-83 tr|B4FTD2|B4FTD2_MAIZE Putative uncharacterized protein OS=Zea m... 307 2e-82 tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 307 3e-82 tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea m... 307 3e-82 tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomit... 307 3e-82 tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza s... 306 4e-82 tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert seque... 306 4e-82 tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expre... 306 4e-82 tr|B4FSQ4|B4FSQ4_MAIZE Putative uncharacterized protein OS=Zea m... 306 4e-82 tr|A2XD89|A2XD89_ORYSI Putative uncharacterized protein OS=Oryza... 306 4e-82 tr|B6T6X2|B6T6X2_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 306 5e-82 tr|A9P801|A9P801_POPTR Putative uncharacterized protein OS=Popul... 305 1e-81 tr|A7P6D1|A7P6D1_VITVI Chromosome chr9 scaffold_7, whole genome ... 305 1e-81 tr|A5BUU4|A5BUU4_VITVI Putative uncharacterized protein OS=Vitis... 305 1e-81 tr|B6TIC4|B6TIC4_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 304 2e-81 tr|A9P891|A9P891_POPTR Putative uncharacterized protein OS=Popul... 303 3e-81 tr|Q308A0|Q308A0_SOLTU P40-like protein OS=Solanum tuberosum PE=... 303 4e-81 tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Ar... 303 4e-81 tr|A9P906|A9P906_POPTR Putative uncharacterized protein OS=Popul... 303 5e-81 tr|A9PC77|A9PC77_POPTR Putative uncharacterized protein OS=Popul... 300 3e-80
>tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 313 bits (802), Expect = 4e-84 Identities = 152/164 (92%), Positives = 160/164 (97%) Frame = +2
Query: 56 LSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 235 LSQKEADIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 236 IENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 415 IENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 416 RTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 RTDHQPI+EAALGNIP IAFCDTDSPM+HVDIGIPANNKGKHSI Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSI 171
>tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 313 bits (801), Expect = 5e-84 Identities = 151/164 (92%), Positives = 160/164 (97%) Frame = +2
Query: 56 LSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 235 LSQKEAD+QMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 236 IENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 415 IENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 416 RTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 RTDHQPI+EAALGNIP IAFCDTDSPM+HVDIGIPANNKGKHSI Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSI 171
>tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subsp. japonica GN=B1056G08.113 PE=2 SV=2 Length = 305
Score = 311 bits (797), Expect = 1e-83 Identities = 152/174 (87%), Positives = 164/174 (94%) Frame = +2
Query: 26 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 205 ++ G AAA LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 206 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 385 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 386 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SI Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSI 175
>tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26872 PE=3 SV=1 Length = 305
Score = 311 bits (797), Expect = 1e-83 Identities = 152/174 (87%), Positives = 164/174 (94%) Frame = +2
Query: 26 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 205 ++ G AAA LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 206 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 385 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 386 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SI Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSI 175
>tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 311 bits (796), Expect = 2e-83 Identities = 152/174 (87%), Positives = 163/174 (93%) Frame = +2
Query: 26 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 205 +S G A LSQKE DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTWDK Sbjct: 3 ASAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDK 62
Query: 206 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 385 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 386 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG++SI Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSI 176
>tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11954 PE=3 SV=1 Length = 310
Score = 310 bits (794), Expect = 3e-83 Identities = 152/174 (87%), Positives = 162/174 (93%) Frame = +2
Query: 26 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 205 ++ G A LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+K Sbjct: 4 AAAGGGAPRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEK 63
Query: 206 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 385 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 64 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 123
Query: 386 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SI Sbjct: 124 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSI 177
>tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 299
Score = 309 bits (792), Expect = 5e-83 Identities = 151/170 (88%), Positives = 162/170 (95%) Frame = +2
Query: 38 QAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELA 217 Q ++ LSQKEADIQMMLAADVHLGTKNCDFQMERY +KRR+DGI+IIN+GKTW+KL+LA Sbjct: 5 QLSSRQLSQKEADIQMMLAADVHLGTKNCDFQMERYCFKRRNDGIYIINLGKTWEKLQLA 64
Query: 218 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRL 397 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRL Sbjct: 65 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQVSFSEPRL 124
Query: 398 LILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 LILTDPRTDHQPIKEAALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSI Sbjct: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSI 174
>tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126323 PE=3 SV=1 Length = 305
Score = 309 bits (792), Expect = 5e-83 Identities = 149/163 (91%), Positives = 157/163 (96%) Frame = +2
Query: 59 SQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAI 238 + KE+D+QMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AI Sbjct: 1 TMKESDVQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAI 60
Query: 239 ENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPR 418 ENPQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPR Sbjct: 61 ENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPR 120
Query: 419 TDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 TDHQPI EAALGNIP+IAFCDTDSPM++VDI IPANNKGKHSI Sbjct: 121 TDHQPIMEAALGNIPVIAFCDTDSPMKYVDIAIPANNKGKHSI 163
>tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193949 PE=3 SV=1 Length = 292
Score = 309 bits (791), Expect = 7e-83 Identities = 149/161 (92%), Positives = 156/161 (96%) Frame = +2
Query: 65 KEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIEN 244 KE+D+QMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIEN Sbjct: 2 KESDVQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIEN 61
Query: 245 PQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTD 424 PQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTD Sbjct: 62 PQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTD 121
Query: 425 HQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 HQPI EAALGNIP+IAFCDTDSPM++VDI IPANNKGKHSI Sbjct: 122 HQPIMEAALGNIPVIAFCDTDSPMKYVDIAIPANNKGKHSI 162
>tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105781 PE=3 SV=1 Length = 292
Score = 309 bits (791), Expect = 7e-83 Identities = 149/161 (92%), Positives = 156/161 (96%) Frame = +2
Query: 65 KEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIEN 244 KE+D+QMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIEN Sbjct: 2 KESDVQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIEN 61
Query: 245 PQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTD 424 PQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTD Sbjct: 62 PQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTD 121
Query: 425 HQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSI 547 HQPI EAALGNIP+IAFCDTDSPM++VDI IPANNKGKHSI Sbjct: 122 HQPIMEAALGNIPVIAFCDTDSPMKYVDIAIPANNKGKHSI 162
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