| DK960207 |
| Clone id |
TST39A01NGRL0006_M16 |
| Library |
TST39 |
| Length |
399 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_M16. 5' end sequence. |
| Accession |
DK960207 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
CTGCACGGGTGCAATACCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTTGGGGCGTTTGGTTTGTGAACACAGAAAGATGGGCTTTGACACGCACCCGCTCTCGCT GAAAAAGCTTTGCAAAGAACTTATATTTTTTTGTTTGCGGGTACTCTAGTTGTCCAGAGT TGAATGAAGTGTTATATTTGCCGCACAGGGGCACTCTGAAGGTTAAGCACTCGCATTCTT ACACCGGCGTGCGATCGATACATTTGGAATGCAATGCAATTTCGAATATTGAGGGTTTAG AAGATTGTGTGAACCTTGCTTGCTTGTATCTAAATCAGAATGTGATCGAGGACATAAAAG GACTTGACAACCTTAAATGCTTAGATACGGTTAACTTGG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q16RY9 |
| Definition |
sp|Q16RY9|LRC50_AEDAE Leucine-rich repeat-containing protein 50 homolog OS=Aedes aegypti |
| Align length |
75 |
| Score (bit) |
74.3 |
| E-value |
2.0e-13 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TQW0 |
| Definition |
tr|A9TQW0|A9TQW0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
92 |
| Score (bit) |
89.4 |
| E-value |
8.0e-17 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960207|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_M16, 5' (399 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TQW0|A9TQW0_PHYPA Predicted protein OS=Physcomitrella paten... 89 8e-17 tr|A2FE84|A2FE84_TRIVA Leucine Rich Repeat family protein OS=Tri... 82 1e-14 tr|Q498E5|Q498E5_XENLA Chc1-b-prov protein OS=Xenopus laevis GN=... 77 3e-13 tr|A2EVQ0|A2EVQ0_TRIVA Leucine Rich Repeat family protein OS=Tri... 77 6e-13 tr|B6KK68|B6KK68_TOXGO Leucine rich repeat protein, putative OS=... 74 3e-12 tr|A0CF78|A0CF78_PARTE Chromosome undetermined scaffold_174, who... 73 6e-12 tr|B0WX44|B0WX44_CULQU Putative uncharacterized protein OS=Culex... 73 8e-12 tr|A7STQ2|A7STQ2_NEMVE Predicted protein OS=Nematostella vectens... 73 8e-12 tr|A8IZM7|A8IZM7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 72 1e-11 tr|A2FHJ7|A2FHJ7_TRIVA Leucine Rich Repeat family protein OS=Tri... 72 2e-11 tr|B4Q4D9|B4Q4D9_DROSI GD24320 OS=Drosophila simulans GN=GD24320... 71 3e-11 tr|B4IFN7|B4IFN7_DROSE GM23411 OS=Drosophila sechellia GN=GM2341... 71 3e-11 tr|B3RLP5|B3RLP5_TRIAD Putative uncharacterized protein (Fragmen... 71 3e-11 tr|Q22UJ1|Q22UJ1_TETTH Leucine Rich Repeat family protein OS=Tet... 68 3e-10 tr|B6KHB8|B6KHB8_TOXGO Leucine rich repeat protein, putative OS=... 68 3e-10 tr|B4JPX2|B4JPX2_DROGR GH13316 OS=Drosophila grimshawi GN=GH1331... 67 3e-10 tr|B3MMB5|B3MMB5_DROAN GF14329 OS=Drosophila ananassae GN=GF1432... 67 3e-10 tr|A0DKX9|A0DKX9_PARTE Chromosome undetermined scaffold_55, whol... 67 3e-10 tr|Q5QFB6|Q5QFB6_SCHMA Sm50 protein OS=Schistosoma mansoni PE=2 ... 66 1e-09 tr|B6D5P5|B6D5P5_PERER Leucine-rich repeat-containing 50 protein... 65 2e-09 tr|B6D5P4|B6D5P4_PERAZ Leucine-rich repeat-containing 50 protein... 65 2e-09 tr|B6D5P2|B6D5P2_PERMA Leucine-rich repeat-containing 50 protein... 65 2e-09 tr|Q017T0|Q017T0_OSTTA [S] KOG2111 Uncharacterized conserved pro... 65 2e-09 tr|Q8IDM1|Q8IDM1_PLAF7 Putative uncharacterized protein MAL13P1.... 65 2e-09 tr|Q2TFW7|Q2TFW7_PLAFA Leucine-rich-repeat protein 4.1 OS=Plasmo... 65 2e-09 tr|Q2TFW6|Q2TFW6_PLAFA Leucine-rich-repeat protein 4.2 OS=Plasmo... 65 2e-09 tr|Q2TFW5|Q2TFW5_PLAFA Leucine-rich-repeat protein 4.3 OS=Plasmo... 65 2e-09 tr|B6MIS0|B6MIS0_BRAFL Putative uncharacterized protein OS=Branc... 65 2e-09 tr|B6L2K8|B6L2K8_BRAFL Putative uncharacterized protein OS=Branc... 65 2e-09 tr|B4N7Q5|B4N7Q5_DROWI GK18740 OS=Drosophila willistoni GN=GK187... 65 2e-09
>tr|A9TQW0|A9TQW0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_95960 PE=4 SV=1 Length = 588
Score = 89.4 bits (220), Expect = 8e-17 Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 13/92 (14%) Frame = +3
Query: 162 YSSCPELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLN-- 335 Y+SCPELNEV++L +G K+++ YTG+R+++LECNA+S +E LE VNL CLYLN Sbjct: 31 YTSCPELNEVIHLHQKGIQKIQNLDEYTGLRTVYLECNAVSKMENLEPLVNLRCLYLNQV 90
Query: 336 -----------QNVIEDIKGLDNLKCLDTVNL 398 QN++E ++GL+ LK L+ ++L Sbjct: 91 RNLLIKQAETTQNLVEVVEGLETLKYLEIIDL 122
>tr|A2FE84|A2FE84_TRIVA Leucine Rich Repeat family protein OS=Trichomonas vaginalis G3 GN=TVAG_216780 PE=4 SV=1 Length = 353
Score = 82.0 bits (201), Expect = 1e-14 Identities = 39/79 (49%), Positives = 54/79 (68%) Frame = +3
Query: 156 CGYSSCPELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLN 335 CGY + PELN+VLYL +R K+K+ Y ++++ L NAIS IEGL + +LACLYL Sbjct: 27 CGYVNSPELNDVLYLHYRAFTKIKNLDPYINLKALWLNNNAISAIEGLSNLKSLACLYLQ 86
Query: 336 QNVIEDIKGLDNLKCLDTV 392 N+IED+ GL+ L L T+ Sbjct: 87 NNIIEDLNGLEGLDSLKTL 105
>tr|Q498E5|Q498E5_XENLA Chc1-b-prov protein OS=Xenopus laevis GN=chc1-b-prov PE=2 SV=1 Length = 325
Score = 77.4 bits (189), Expect = 3e-13 Identities = 35/77 (45%), Positives = 55/77 (71%) Frame = +3
Query: 168 SCPELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQNVI 347 S P LN+ LYL ++G ++V++ YTG++ + LECN ++ IE L+ L CL+L+QN+I Sbjct: 63 STPYLNDTLYLHYKGFMRVENLEEYTGLKCLWLECNGLTRIENLDAQTELRCLFLHQNLI 122
Query: 348 EDIKGLDNLKCLDTVNL 398 I+ LD+L+ LDT+NL Sbjct: 123 HKIENLDHLQKLDTLNL 139
>tr|A2EVQ0|A2EVQ0_TRIVA Leucine Rich Repeat family protein OS=Trichomonas vaginalis G3 GN=TVAG_299230 PE=4 SV=1 Length = 353
Score = 76.6 bits (187), Expect = 6e-13 Identities = 37/78 (47%), Positives = 53/78 (67%) Frame = +3
Query: 159 GYSSCPELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQ 338 GY S PELN+VLYL +R ++K+ + ++++ L NAIS IEGL + NLACLYL Sbjct: 28 GYVSSPELNDVLYLHYRSFTRIKNLDPFINLKALWLNNNAISVIEGLSNLKNLACLYLQN 87
Query: 339 NVIEDIKGLDNLKCLDTV 392 N+IE++ GL+ L L T+ Sbjct: 88 NIIEELSGLEGLYSLKTL 105
>tr|B6KK68|B6KK68_TOXGO Leucine rich repeat protein, putative OS=Toxoplasma gondii ME49 GN=TGME49_033940 PE=4 SV=1 Length = 435
Score = 74.3 bits (181), Expect = 3e-12 Identities = 36/79 (45%), Positives = 50/79 (63%) Frame = +3
Query: 162 YSSCPELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQN 341 Y S PELN+VL+L +G K++ +TG+R++H E NA IEGL+ C L LYL +N Sbjct: 22 YYSTPELNDVLFLHFKGYRKLEALEEFTGLRTLHAETNAFGKIEGLDACTGLRSLYLQEN 81
Query: 342 VIEDIKGLDNLKCLDTVNL 398 I I+ L+ L L T+NL Sbjct: 82 CIRKIENLEKLSELQTLNL 100
>tr|A0CF78|A0CF78_PARTE Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00037884001 PE=4 SV=1 Length = 378
Score = 73.2 bits (178), Expect = 6e-12 Identities = 35/79 (44%), Positives = 55/79 (69%) Frame = +3
Query: 162 YSSCPELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQN 341 Y + PELN+ LYL ++G K+++ +TG++ I+LE N ++NIEGL+ ++L CLYL +N Sbjct: 24 YYTTPELNDCLYLHYKGFEKIENLEEFTGLKVIYLEGNGLNNIEGLDCLISLKCLYLQEN 83
Query: 342 VIEDIKGLDNLKCLDTVNL 398 VI I+ L+ L L +NL Sbjct: 84 VIRKIENLNMLTELINLNL 102
>tr|B0WX44|B0WX44_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ011994 PE=4 SV=1 Length = 126
Score = 72.8 bits (177), Expect = 8e-12 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +3
Query: 174 PELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQNVIED 353 P LN++LYL + G ++ Y G++ + LECNAIS I GL++ L CLYL N+I Sbjct: 34 PHLNDILYLHYSGYNAIESLEEYVGLKCLWLECNAISAISGLDNQSQLKCLYLQNNLITK 93
Query: 354 IKGLDNLKCLDTVNL 398 I+ LD+ K LDT+NL Sbjct: 94 IENLDSCKQLDTLNL 108
>tr|A7STQ2|A7STQ2_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g131384 PE=4 SV=1 Length = 247
Score = 72.8 bits (177), Expect = 8e-12 Identities = 34/75 (45%), Positives = 49/75 (65%) Frame = +3
Query: 174 PELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQNVIED 353 P LN++LYL RG K+++ YTGV+ + LECN I IE L L CLYL QN+++ Sbjct: 19 PHLNDILYLHFRGFGKIENLEEYTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKK 78
Query: 354 IKGLDNLKCLDTVNL 398 ++ L+ L LDT+N+ Sbjct: 79 VENLEELDGLDTLNV 93
>tr|A8IZM7|A8IZM7_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_117918 PE=4 SV=1 Length = 214
Score = 72.0 bits (175), Expect = 1e-11 Identities = 35/75 (46%), Positives = 55/75 (73%) Frame = +3
Query: 174 PELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQNVIED 353 PELN+VL+L +G K+++ +YTG+++++LE NAI++IE L+ VNL CLYL +N+I Sbjct: 1 PELNDVLHLQCKGITKLENLDAYTGLKTLYLEQNAIADIENLDMLVNLRCLYLGKNMIHS 60
Query: 354 IKGLDNLKCLDTVNL 398 GL L L+T++L Sbjct: 61 TFGLQALTNLETLDL 75
>tr|A2FHJ7|A2FHJ7_TRIVA Leucine Rich Repeat family protein OS=Trichomonas vaginalis G3 GN=TVAG_047300 PE=4 SV=1 Length = 374
Score = 71.6 bits (174), Expect = 2e-11 Identities = 38/75 (50%), Positives = 48/75 (64%) Frame = +3
Query: 174 PELNEVLYLPHRGTLKVKHSHSYTGVRSIHLECNAISNIEGLEDCVNLACLYLNQNVIED 353 PELN+VLYL G K+ + Y + SI L NAI IEGL+ NL CLYL NVI++ Sbjct: 34 PELNDVLYLHFSGYQKIANLEPYVNLTSIWLNNNAIYEIEGLDTLTNLVCLYLQGNVIQE 93
Query: 354 IKGLDNLKCLDTVNL 398 IKGL+ L L+T+ L Sbjct: 94 IKGLEKLVNLETLVL 108
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