DK960212 |
Clone id |
TST39A01NGRL0006_M21 |
Library |
TST39 |
Length |
626 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_M21. 5' end sequence. |
Accession |
DK960212 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL261Contig1 |
Sequence |
GCAGCTGTTAAGAAGCTCAAAGTTACAGAGAAATCTTTGGCTCAAGTTGCTTGGAATTTC TTAAATGATGCGTTGAGGACATCGCTATGCCTGCAGTATGAGGCTCATTATATTGCAGCT GGGGGCATTTTCCTTGCAGCAAAGTTTCTGAAAATGAAGCTGCCAACCGACTGCGAAAAG CCCTGGTGGCAAGAGCTGGAGGTTACTGCCCGGCAATTAGAAGATGTGAGTAATCAGATG CTGGAATTGTATGAGCATCACCGGGATTCAACTCCTAGTCCTAGCGGTATTACAGGAAGC GTGGTCCCCCCCCAGGCCCCTCCTGCCACACCCCAAGTGACAGTGAAAAGGAACACCAAG CTGAGAGAGAAGGAAGCCGACTGCGACTGCTCAAGTATACAGGGTAATGTCTCAAGTATA CATGCGTCGAAATCCCCCTATATTTCCCCTGAGAAAGAGAACTTTGAGAAACCAGAGCTT AGTGACCTTGGAAGTCTAGATGTTGCAGAAGAGAGCAAGCGCATCCACCCACGCTGTGGC TCTCAAGATTGTCACGAGCGGGAATCAAAGAGGCCTTGTTCTGGTTTAGTGACTTGAGTG TATCTCTGAATGTTGTAGTTTCTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2RAC5 |
Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
Align length |
95 |
Score (bit) |
140.0 |
E-value |
4.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BJ73 |
Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
95 |
Score (bit) |
140.0 |
E-value |
5.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960212|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_M21, 5' (626 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 140 5e-32 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 140 5e-32 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 140 8e-32 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 137 4e-31 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 136 9e-31 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 136 9e-31 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 135 2e-30 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 132 2e-29 tr|A5B2H4|A5B2H4_VITVI Putative uncharacterized protein OS=Vitis... 123 1e-26 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 115 2e-24 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 104 5e-21 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 100 7e-20 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 96 2e-18 tr|A5C1E2|A5C1E2_VITVI Putative uncharacterized protein OS=Vitis... 96 2e-18 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 91 6e-17 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 91 6e-17 tr|B7ETJ6|B7ETJ6_ORYSJ cDNA clone:J033105N11, full insert sequen... 91 6e-17 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 89 3e-16 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 86 2e-15 tr|B6SVQ2|B6SVQ2_MAIZE Putative uncharacterized protein OS=Zea m... 84 5e-15 tr|A9PFH1|A9PFH1_POPTR Putative uncharacterized protein OS=Popul... 82 3e-14 tr|Q01EB0|Q01EB0_OSTTA CycK CycK-related cyclin family protein (... 82 3e-14 tr|A4RSP3|A4RSP3_OSTLU CycK-related cyclin family protein OS=Ost... 79 2e-13 tr|Q54N22|Q54N22_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 70 1e-10 tr|A8I762|A8I762_CHLRE L-type cyclin (Fragment) OS=Chlamydomonas... 69 3e-10 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 68 4e-10 tr|Q1E1L4|Q1E1L4_COCIM Putative uncharacterized protein OS=Cocci... 67 7e-10 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 140 bits (354), Expect = 5e-32 Identities = 66/95 (69%), Positives = 79/95 (83%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A+KK KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 189 AIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 248
Query: 184 WWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 288 WWQE +VT RQLE+VSNQMLELYE +R + P G Sbjct: 249 WWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQG 283
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 140 bits (354), Expect = 5e-32 Identities = 66/95 (69%), Positives = 79/95 (83%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A+KK KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 194 AIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 253
Query: 184 WWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 288 WWQE +VT RQLE+VSNQMLELYE +R + P G Sbjct: 254 WWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQG 288
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 140 bits (352), Expect = 8e-32 Identities = 67/99 (67%), Positives = 80/99 (80%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A+KK KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 185 AIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 244
Query: 184 WWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSGITGS 300 WWQE +VT RQLE+VSNQMLELYE +R S + GS Sbjct: 245 WWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGS 283
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 137 bits (346), Expect = 4e-31 Identities = 64/95 (67%), Positives = 79/95 (83%) Frame = +1
Query: 1 AAVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEK 180 AA+KK KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+ LP D +K Sbjct: 154 AAIKKFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDK 213
Query: 181 PWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 285 WWQ+ EVT RQLE+VSNQMLELYE ++ + P+ S Sbjct: 214 VWWQQFEVTPRQLEEVSNQMLELYEQNKSNGPTGS 248
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 136 bits (343), Expect = 9e-31 Identities = 64/94 (68%), Positives = 78/94 (82%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A++K KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 188 AIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 247
Query: 184 WWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 285 WWQE +VT RQLE+VSNQMLELYE + + PS Sbjct: 248 WWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS 281
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 136 bits (343), Expect = 9e-31 Identities = 64/94 (68%), Positives = 78/94 (82%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A++K KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 216 AIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 275
Query: 184 WWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 285 WWQE +VT RQLE+VSNQMLELYE + + PS Sbjct: 276 WWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS 309
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 135 bits (340), Expect = 2e-30 Identities = 63/87 (72%), Positives = 75/87 (86%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A+KK V + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 186 AIKKFNVAKNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 245
Query: 184 WWQELEVTARQLEDVSNQMLELYEHHR 264 WWQE +VT RQLE+VSNQMLELYE +R Sbjct: 246 WWQEFDVTPRQLEEVSNQMLELYEQNR 272
>tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_17473 PE=3 SV=1 Length = 230
Score = 132 bits (331), Expect = 2e-29 Identities = 61/87 (70%), Positives = 74/87 (85%) Frame = +1
Query: 1 AAVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEK 180 AA+K+ KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+ LP + +K Sbjct: 144 AAIKRFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKEGDK 203
Query: 181 PWWQELEVTARQLEDVSNQMLELYEHH 261 WWQE EVT RQLE+VSNQMLELYE + Sbjct: 204 VWWQEFEVTPRQLEEVSNQMLELYEQN 230
>tr|A5B2H4|A5B2H4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039383 PE=4 SV=1 Length = 481
Score = 123 bits (308), Expect = 1e-26 Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 9/104 (8%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAW---------NFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKM 156 A+KK K + +LAQVAW NF+ND LRTSLCLQ++ +IAAG IFLAAKFLK+ Sbjct: 80 AMKKFKAAQDALAQVAWNFALAQVAWNFVNDGLRTSLCLQFKPDHIAAGAIFLAAKFLKV 139
Query: 157 KLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 288 KLP+D E WWQE +VT RQLE++SNQMLELYE +R P P G Sbjct: 140 KLPSDGEVVWWQEFDVTPRQLEEISNQMLELYEQNR--VPPPQG 181
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 115 bits (289), Expect = 2e-24 Identities = 53/73 (72%), Positives = 63/73 (86%) Frame = +1
Query: 4 AVKKLKVTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKP 183 A+KK KV + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK Sbjct: 185 AIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKV 244
Query: 184 WWQELEVTARQLE 222 WWQE +VT RQLE Sbjct: 245 WWQEFDVTPRQLE 257
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