DK960214
Clone id TST39A01NGRL0006_M23
Library
Length 653
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_M23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGTCTCTCTCTCTCTCTCTCACACACACACAAAACACGCACGCGCGCGCGTACTCTTTC
TCCGTCGCTCTGCCTGTCAGCTTAACTCAGATCCCTACAGCTCCCTCATCGGCAGCGACG
TGCCTCTCCCTCGCAAAGGCCCGCAGCAGTTTGCCTTGCGGCATTTATAATTTGCCCCTT
TTCCTCGCAGGAATATTTGATCCTTACAGTAAGTAAAGGGCGGCTCGAAGCTTGCCATGG
CGTCCTTCACAGCCTCTAGCATATGCTTCACATTTCAAGCGGCGGAAGTCAGCCATGGCA
GGTCCTTTGTCAGCAAGCCTTCTTGCAGTGAAGTTATTACAACTGGACTCAGAAGTAGCG
TCTCCAAGCAGGACGTGAAGCTCTGTGAGCAAGCACAGAGAAGAGGGATTCAGTGCATGG
CACAACAGACTGTCTCTCCACTGCTAGAATATTCAGAGAGAGCTGATAGTAGCTTCGCAT
TGCCAACACTGGCTTCATCACCATCATCCCTGGTAGAATCAGGTCACTATTGGAGTAGCC
CTGCCGATGTGCAACCTGCTAGTTCTGGTTCATCCTCAAGTCAAGCTGACGCTCTCGGAG
GTGTGTCTGTTGCCTCCCTCATGGAACCTGTTGCTGAAGATCTACAGATCTTG
■■Homology search results ■■ -
sp_hit_id Q9FH76
Definition sp|Q9FH76|ABAH3_ARATH Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana
Align length 55
Score (bit) 30.8
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960214|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_M23, 5'
(653 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FH76|ABAH3_ARATH Abscisic acid 8'-hydroxylase 3 OS=Arabidop... 31 6.5

>sp|Q9FH76|ABAH3_ARATH Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis
thaliana GN=CYP707A3 PE=1 SV=1
Length = 463

Score = 30.8 bits (68), Expect = 6.5
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3

Query: 543 QGYSNSDLILPGMMVMKPVLAMRSYYQLSLNILAVERQSVVPCTESLFSVLAHRA 379
+GY++ + LPG + K + A + Q+ NIL+ RQ+ T+ L S + +A
Sbjct: 204 KGYNSMPINLPGTLFHKAMKARKELAQILANILSKRRQNPSSHTDLLGSFMEDKA 258


tr_hit_id Q917Y2
Definition tr|Q917Y2|Q917Y2_9CALI Minor structural protein OS=Norwalk-like virus NLV/Westover/302/1994/US
Align length 138
Score (bit) 35.0
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960214|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_M23, 5'
(653 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q917Y2|Q917Y2_9CALI Minor structural protein OS=Norwalk-like ... 35 4.0
tr|A2R9V2|A2R9V2_ASPNC Similarity: similarity corresponds to fun... 34 6.8
tr|A9UUU4|A9UUU4_MONBE Predicted protein OS=Monosiga brevicollis... 30 7.6
tr|A8J0S8|A8J0S8_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 8.9
tr|A3GGD8|A3GGD8_PICST Possible regulatory protein OS=Pichia sti... 34 8.9

>tr|Q917Y2|Q917Y2_9CALI Minor structural protein OS=Norwalk-like
virus NLV/Westover/302/1994/US GN=orf3 PE=4 SV=1
Length = 260

Score = 35.0 bits (79), Expect = 4.0
Identities = 33/138 (23%), Positives = 57/138 (41%)
Frame = +1

Query: 28 TQNTHARAYSFSVALPVSLTQIPTAPSSAATCLSLAKARSSLPCGIYNLPLFLAGIFDPY 207
T ++HAR PV+ +P P S+++ S RS+L G N P
Sbjct: 121 TGSSHARTIDLPKKTPVTPASVP-VPRSSSSSASTVSTRSTLVSGSSNFP---------- 169

Query: 208 SK*RAARSLPWRPSQPLAYASHFKRRKSAMAGPLSASLLAVKLLQLDSEVASPSRT*SSV 387
S +++ S+ + + P + S + R ++ P L + S AS + T S+V
Sbjct: 170 SSTKSSISVSSQSTSPSSRTSEWVRNQNRALEPYMRGALKTAYVTPPSSRASSNGTVSTV 229

Query: 388 SKHREEGFSAWHNRLSLH 441
K E +W + + H
Sbjct: 230 PK---EVLDSWTSVFNTH 244


>tr|A2R9V2|A2R9V2_ASPNC Similarity: similarity corresponds to fungal
Zn(2)-Cys(6) binuclear cluster domain OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=An18g00320
PE=4 SV=1
Length = 608

Score = 34.3 bits (77), Expect = 6.8
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Frame = +1

Query: 37 THARAYSFSVALPVSLTQIPT--APSSAATCLSLAKARSSLPCGIYNLPLFLAGIFDPYS 210
T+ YSF P L + PT A S + L L+ S + + +LP + I +
Sbjct: 45 TYGIDYSFHNITPTKLQRQPTTLAESPRSALLPLSSVPSKVAVELRHLPR--SCISHQLT 102

Query: 211 K*RAARSLPWRPSQPLAYASHFKR--RKSAMAGPLSAS---------------LLAVKLL 339
+ R ARSL + Y SHF+R R A PL ++ + A L
Sbjct: 103 RARIARSLDCGENLETCYLSHFQRHVRYLLPASPLPSATATFHSPYLRAAVLCISASNLS 162

Query: 340 QLDSEVASPSRT*SSVSKHREEGFSAWHNRL 432
LD++V S V HR+ FS N L
Sbjct: 163 MLDAQVQSR----ILVGSHRQSSFSPLVNSL 189


>tr|A9UUU4|A9UUU4_MONBE Predicted protein OS=Monosiga brevicollis
GN=23789 PE=4 SV=1
Length = 17829

Score = 30.0 bits (66), Expect(2) = 7.6
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1

Query: 4 SLSLSLTHTQ-NTHARAYSFSVALPVSLTQIPTAPSSAATCLSLAKARS 147
+LSLSL HT +TH + S S++L +SL+ + S + CL L+ + S
Sbjct: 12168 TLSLSLCHTHTHTHTLSLSLSLSLSLSLSLSLSLRLSLSLCLCLSLSLS 12216



Score = 21.9 bits (45), Expect(2) = 7.6
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3

Query: 3 VSLSLSHTHT 32
VSLSL HTHT
Sbjct: 12157 VSLSLRHTHT 12166


>tr|A8J0S8|A8J0S8_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_191228 PE=4 SV=1
Length = 674

Score = 33.9 bits (76), Expect = 8.9
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 14/51 (27%)
Frame = +1

Query: 25 HTQNTHARAYSFS--------------VALPVSLTQIPTAPSSAATCLSLA 135
HTQNTHAR ++S ALP L Q+PT+P +A A
Sbjct: 426 HTQNTHARGMAYSARDSAAAEAGSVRETALPYILAQLPTSPPAAGNTFRAA 476


>tr|A3GGD8|A3GGD8_PICST Possible regulatory protein OS=Pichia
stipitis GN=PICST_64902 PE=4 SV=1
Length = 675

Score = 33.9 bits (76), Expect = 8.9
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1

Query: 34 NTHARAYSFSVALPVSLTQIPTAPSSAATCLSLAKARSSLPCGIYNLPLFLAGI 195
NT R+++ S PV+LT++ P S+ ++RS + NLPL LAG+
Sbjct: 179 NTPLRSHTSSALSPVALTKVSKTPHSSKV-KGHTRSRSRMSIDALNLPLSLAGV 231