DK960217
Clone id TST39A01NGRL0006_N02
Library
Length 670
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_N02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGAAAAGAAGATGCACCGTTTCACATGAGAGTTTTTACCTTTGTGGCAGCTACTCTTTGT
TATGGCCTTAAGAAACGTTTCTAAAGGAGAAGAATGCACTCGTGACTTTCTTTTTGGTTT
TGGAGAGGACAAACAGCGGTCTGCTCGTCTTACAGCATGGTTCCATACTCCAACTGATTA
TTTTGAGAAGGTAGGTGAAATCATTCTTAGGTGTATGCATGCATGTAACATGTGAAAGGA
TGTGGGATTGGTAGTAGATAGGAATATAGGACTTAGTGGTTTGCGCTTGCATCTAGACAG
ACCATTCTGCATCTTATCAAGGATAGAATAGCTTTGCTGCAAATTTGAACGCAGGAGAGT
GGATTAGTTAAGCAAGACATCATGGCAATCCCAAAGCCGCCTAAAGGAAGTTTCAGTACT
TGCTTGTCATGTGATTTGACATTGGTTCAGGAAAATGTTAGACCAGATAAGCTATGGCTC
TAAATGGAATGGATTATTAAATCTGTGCCATCCTACTTATGACACATCTCTGCACAGGAC
AAACCCCCAACACTTTTTACCGGAAAAAGACATAATTTTAGAGTCATTCTTTGCAAGAAA
ACTCAATCTACTTTTTCATAGGACGCTTTAAAGCGACGAGGGAGAAAAAGAAGGGAGGAG
GCTTAGTACC
■■Homology search results ■■ -
sp_hit_id Q14166
Definition sp|Q14166|TTL12_HUMAN Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens
Align length 40
Score (bit) 31.2
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960217|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_N02, 5'
(670 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q14166|TTL12_HUMAN Tubulin--tyrosine ligase-like protein 12 O... 31 5.2

>sp|Q14166|TTL12_HUMAN Tubulin--tyrosine ligase-like protein 12
OS=Homo sapiens GN=TTLL12 PE=1 SV=2
Length = 644

Score = 31.2 bits (69), Expect = 5.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYFE 187
LR++ GEE TRDF +G + R L W PTD +
Sbjct: 229 LRDLDTGEEVTRDFAYGETDPLIRKCMLLPW--APTDMLD 266


tr_hit_id A7PDX1
Definition tr|A7PDX1|A7PDX1_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 38
Score (bit) 75.5
E-value 3.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960217|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_N02, 5'
(670 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PDX1|A7PDX1_VITVI Chromosome chr11 scaffold_13, whole genom... 75 3e-12
tr|A5AQ23|A5AQ23_VITVI Putative uncharacterized protein OS=Vitis... 75 3e-12
tr|Q8H022|Q8H022_ORYSJ Putative uncharacterized protein OSJNBa00... 72 2e-11
tr|Q10QY4|Q10QY4_ORYSJ Os03g0179000 protein OS=Oryza sativa subs... 72 4e-11
tr|Q10QY3|Q10QY3_ORYSJ Tubulin-tyrosine ligase family protein, e... 72 4e-11
tr|B8APN1|B8APN1_ORYSI Putative uncharacterized protein OS=Oryza... 72 4e-11
tr|B6U4S2|B6U4S2_MAIZE Tubulin--tyrosine ligase-like protein 12 ... 69 3e-10
tr|Q9CAQ1|Q9CAQ1_ARATH Putative uncharacterized protein T5M16.14... 66 2e-09
tr|Q6IDC7|Q6IDC7_ARATH At1g77550 (Putative uncharacterized prote... 66 2e-09
tr|A9RKG7|A9RKG7_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08
tr|Q22LM4|Q22LM4_TETTH Tubulin-tyrosine ligase family protein OS... 53 2e-05
tr|Q23TT4|Q23TT4_TETTH Tubulin-tyrosine ligase family protein OS... 46 0.002
tr|B6P2G5|B6P2G5_BRAFL Putative uncharacterized protein OS=Branc... 35 4.3
tr|B7QG60|B7QG60_IXOSC Zinc finger protein, putative (Fragment) ... 30 5.0
tr|A7U4W3|A7U4W3_9CHLO Putative uncharacterized protein OS=Dunal... 34 7.3
tr|Q4FNF8|Q4FNF8_PELUB Nuclear protein SET OS=Pelagibacter ubiqu... 34 9.5
tr|Q1V1M1|Q1V1M1_9RICK Nuclear protein SET OS=Candidatus Pelagib... 34 9.5

>tr|A7PDX1|A7PDX1_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016446001
PE=4 SV=1
Length = 856

Score = 75.5 bits (184), Expect = 3e-12
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2

Query: 71 RNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+NV KG+ECTRDFLFG GEDKQRSARLTAWFHTP +YF
Sbjct: 461 QNVQKGDECTRDFLFGIGEDKQRSARLTAWFHTPQNYF 498


>tr|A5AQ23|A5AQ23_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_006435 PE=4 SV=1
Length = 870

Score = 75.5 bits (184), Expect = 3e-12
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2

Query: 71 RNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+NV KG+ECTRDFLFG GEDKQRSARLTAWFHTP +YF
Sbjct: 465 QNVQKGDECTRDFLFGIGEDKQRSARLTAWFHTPQNYF 502


>tr|Q8H022|Q8H022_ORYSJ Putative uncharacterized protein
OSJNBa0050H14.8 (Putative uncharacterized protein)
OS=Oryza sativa subsp. japonica GN=OSJNBa0050H14.8 PE=4
SV=1
Length = 837

Score = 72.4 bits (176), Expect = 2e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYFEKVGEIILR 211
+ +V GEECTRDFLFG GEDKQRSARLTAWFHTP +YF + ++ +
Sbjct: 464 VHDVHTGEECTRDFLFGVGEDKQRSARLTAWFHTPENYFIQARNLVCK 511


>tr|Q10QY4|Q10QY4_ORYSJ Os03g0179000 protein OS=Oryza sativa subsp.
japonica GN=Os03g0179000 PE=4 SV=1
Length = 870

Score = 71.6 bits (174), Expect = 4e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+ +V GEECTRDFLFG GEDKQRSARLTAWFHTP +YF
Sbjct: 464 VHDVHTGEECTRDFLFGVGEDKQRSARLTAWFHTPENYF 502


>tr|Q10QY3|Q10QY3_ORYSJ Tubulin-tyrosine ligase family protein,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os03g08140 PE=4 SV=1
Length = 785

Score = 71.6 bits (174), Expect = 4e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+ +V GEECTRDFLFG GEDKQRSARLTAWFHTP +YF
Sbjct: 464 VHDVHTGEECTRDFLFGVGEDKQRSARLTAWFHTPENYF 502


>tr|B8APN1|B8APN1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10249 PE=4 SV=1
Length = 832

Score = 71.6 bits (174), Expect = 4e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+ +V GEECTRDFLFG GEDKQRSARLTAWFHTP +YF
Sbjct: 422 VHDVHTGEECTRDFLFGVGEDKQRSARLTAWFHTPENYF 460


>tr|B6U4S2|B6U4S2_MAIZE Tubulin--tyrosine ligase-like protein 12
OS=Zea mays PE=2 SV=1
Length = 872

Score = 68.6 bits (166), Expect = 3e-10
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +2

Query: 74 NVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+V GEECTRDFLFG GEDKQRSARLTAWF TP +YF
Sbjct: 464 DVHTGEECTRDFLFGIGEDKQRSARLTAWFRTPENYF 500


>tr|Q9CAQ1|Q9CAQ1_ARATH Putative uncharacterized protein T5M16.14
OS=Arabidopsis thaliana GN=T5M16.14 PE=4 SV=1
Length = 883

Score = 66.2 bits (160), Expect = 2e-09
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+++ KG+ECTRDFL G GEDKQRSARLTAWF TP +YF
Sbjct: 465 IKHSQKGDECTRDFLSGIGEDKQRSARLTAWFQTPENYF 503


>tr|Q6IDC7|Q6IDC7_ARATH At1g77550 (Putative uncharacterized protein
At1g77550) OS=Arabidopsis thaliana GN=At1g77550 PE=2
SV=1
Length = 855

Score = 66.2 bits (160), Expect = 2e-09
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYF 184
+++ KG+ECTRDFL G GEDKQRSARLTAWF TP +YF
Sbjct: 450 IKHSQKGDECTRDFLSGIGEDKQRSARLTAWFQTPENYF 488


>tr|A9RKG7|A9RKG7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175883 PE=4 SV=1
Length = 874

Score = 63.2 bits (152), Expect(2) = 1e-08
Identities = 24/40 (60%), Positives = 35/40 (87%)
Frame = +2

Query: 68 LRNVSKGEECTRDFLFGFGEDKQRSARLTAWFHTPTDYFE 187
+++VS G+ECTRD+LFG GED+QRS+RL AWFH P++ ++
Sbjct: 471 VQDVSSGDECTRDYLFGIGEDRQRSSRLAAWFHIPSEAYD 510



Score = 20.4 bits (41), Expect(2) = 1e-08
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3

Query: 48 SYSLLWP 68
SYSLLWP
Sbjct: 464 SYSLLWP 470