DK960228
Clone id TST39A01NGRL0006_N13
Library
Length 581
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_N13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGGGATCGGTTTCATTTCTCGTAGCGAAGAAGCGTGCCCTCTTCTCTGTGCCTGCCTTT
GCAAGCCTCGACAGGAGGAGGAGCGACGACAGCCTCATCATCTTGTTCATCTCGTCTCTC
TGCTGCTTCCTCCCAGCTGTGGCGATCTCAGGTTTGGCTACCTCCTCTCGCTCGTCAGAG
CACGCACCCAGGCCTCCAACTTGCATTTGTGTGTGAAACAGCAGTCGAAATAAATGGTGT
CTCCTCGACCTATGGTGTTGATGCACCCTCCCCTGCCTTCGGATCTGTGATTCGAGTCTC
TAAACACCTCAAGGTCTACCATGTCCCCAAACATCCCAGTTTCTACCTGCAAGGCTGTGA
GGGAGAGCTAAAGGATATTCTTATTAGCTGGAAGGGTAAGCCTCTCTCAGCGAATCTCCC
CTATTACGTTCATTTCCTTCTTGACTTTGATGGACAGCAGGTGAAATTCTTTGCGCATCT
CACGAAGGATGAGTTTGAGGTCGTTTGAAGTTCAGCTTCAATAAACATAGCCGTGGCGAT
CCGTTTACACATAAGTGGCCAAATGTTTCCTGATGGATGTT
■■Homology search results ■■ -
sp_hit_id P80680
Definition sp|P80680|FTRV_MAIZE Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays
Align length 81
Score (bit) 76.6
E-value 8.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960228|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_N13, 5'
(581 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P80680|FTRV_MAIZE Ferredoxin-thioredoxin reductase, variable ... 77 8e-14
sp|Q55781|FTRV_SYNY3 Ferredoxin-thioredoxin reductase, variable ... 58 3e-08
sp|P24018|FTRV_SYNP6 Ferredoxin-thioredoxin reductase, variable ... 57 9e-08
sp|P38365|FTRV_SPIOL Ferredoxin-thioredoxin reductase, variable ... 57 9e-08
sp|O93829|PGTA_CANAL Geranylgeranyl transferase type-2 subunit a... 30 6.7
sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=... 30 6.7
sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis... 30 8.7

>sp|P80680|FTRV_MAIZE Ferredoxin-thioredoxin reductase, variable
chain OS=Zea mays PE=1 SV=1
Length = 97

Score = 76.6 bits (187), Expect = 8e-14
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2

Query: 263 APSPAFGSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLL 442
A +P G +RV+ L+VYHV K P +QG EG +K + WKGK ++AN P+ V F L
Sbjct: 13 AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEFEL 72

Query: 443 DFDGQ--QVKFFAHLTKDEFE 499
+GQ V+FFAHL +DEFE
Sbjct: 73 AVEGQPKPVRFFAHLREDEFE 93


>sp|Q55781|FTRV_SYNY3 Ferredoxin-thioredoxin reductase, variable
chain OS=Synechocystis sp. (strain PCC 6803) GN=ftrV
PE=1 SV=1
Length = 75

Score = 58.2 bits (139), Expect = 3e-08
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2

Query: 281 GSVIRVSKHLKVYHVPKHP--SFYLQGCEGELKDILISWKGKPLSANLPYYVHFLLDFDG 454
G +RV+ + VYH P+H +F LQG EGE+ +L W+G+P+SANLP V F
Sbjct: 4 GDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKF------ 57

Query: 455 QQVKFFAHLTKDE 493
+ +F AH DE
Sbjct: 58 -EQRFKAHFRPDE 69


>sp|P24018|FTRV_SYNP6 Ferredoxin-thioredoxin reductase, variable
chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301
/ SAUG 1402/1) GN=ftrV PE=1 SV=1
Length = 73

Score = 56.6 bits (135), Expect = 9e-08
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2

Query: 281 GSVIRVSKHLKVYHVPKH--PSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLLDFDG 454
G +RV + + VYH P H +F L+ EGE+ IL W GKP+SAN PY V F
Sbjct: 4 GDRVRVKESVVVYHHPDHRNQAFDLKDAEGEIAAILTEWNGKPISANFPYLVSF------ 57

Query: 455 QQVKFFAHLTKDEFE 499
KF AHL E E
Sbjct: 58 -SNKFRAHLRDFELE 71


>sp|P38365|FTRV_SPIOL Ferredoxin-thioredoxin reductase, variable
chain, chloroplastic OS=Spinacia oleracea GN=FTRV PE=1
SV=2
Length = 174

Score = 56.6 bits (135), Expect = 9e-08
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Frame = +2

Query: 182 THPGLQLAFVCETAVEINGVSSTYGVDAPSPA--------------FGSVIRVSKHLKVY 319
T +LA CE A++ + S+ G D+ S + G ++V LKVY
Sbjct: 52 TRTRARLAICCEVALKSD---SSTGFDSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVY 108

Query: 320 HVPKHPSFYLQ-GCEGELKDILISWKGKPLSANLPYYVHFLLDF-DGQQVKFFAHLTKDE 493
HVPK P L G +K + WKGK +S N P+ V + +D D VK HL ++E
Sbjct: 109 HVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEE 168

Query: 494 FE 499
FE
Sbjct: 169 FE 170


>sp|O93829|PGTA_CANAL Geranylgeranyl transferase type-2 subunit
alpha OS=Candida albicans GN=BET4 PE=3 SV=1
Length = 371

Score = 30.4 bits (67), Expect = 6.7
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -2

Query: 505 NDLKLILREMRKEFHLLSIKVKKEMNVIGEIR*ERLTLPANKNIL*LSLTALQVETGMFG 326
ND LIL+ EF+ ++K++K+ + +P N++ Q + +FG
Sbjct: 169 NDTTLILKINLDEFNYTTLKIQKDFSNFSAWHNRTKLIPKIYNLIQQQQQQQQKDGKIFG 228

Query: 325 DMVDLEVFRD 296
D+ +E+F++
Sbjct: 229 DLPGIELFQN 238


>sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens
GN=MYBBP1A PE=1 SV=2
Length = 1328

Score = 30.4 bits (67), Expect = 6.7
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Frame = -1

Query: 578 IHQETFGHLCVNGSPRLCLLKLNFKRPQTH----------PS*DAQRISPAVHQSQEGNE 429
+ + FGH+C + +PR L L+ P+T D +R+ A +S+EG +
Sbjct: 669 VARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAEDKSEEGED 728

Query: 428 RNRGDSLREA 399
+S E+
Sbjct: 729 NRSSESEEES 738


>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis
thaliana GN=BHLH79 PE=2 SV=1
Length = 281

Score = 30.0 bits (66), Expect = 8.7
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3

Query: 261 MHPPLPSDL*FESLNTSRSTMSPNIPVSTCKAVRES*RIFLLAGRV 398
M PPL +D F + N S T+S P AVR R+ + +GRV
Sbjct: 1 MDPPLVNDSSFSAANPSSYTLSEIWPFPVNDAVRSGLRLAVNSGRV 46


tr_hit_id A8IXL0
Definition tr|A8IXL0|A8IXL0_BRACM Lipoic acid synthase-like protein OS=Brassica campestris
Align length 74
Score (bit) 80.9
E-value 5.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960228|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_N13, 5'
(581 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8IXL0|A8IXL0_BRACM Lipoic acid synthase-like protein OS=Bras... 81 5e-14
tr|Q9FHL4|Q9FHL4_ARATH Similarity to ferredoxin-thioredoxin redu... 80 6e-14
tr|A9NX05|A9NX05_PICSI Putative uncharacterized protein OS=Picea... 80 8e-14
tr|Q9FT94|Q9FT94_ARATH Lipoic acid synthase-like protein OS=Arab... 79 2e-13
tr|Q8LBP6|Q8LBP6_ARATH Putative uncharacterized protein (At5g084... 79 2e-13
tr|A9SPT5|A9SPT5_PHYPA Predicted protein OS=Physcomitrella paten... 79 2e-13
tr|A7QNQ7|A7QNQ7_VITVI Chromosome undetermined scaffold_133, who... 78 3e-13
tr|A5B8T4|A5B8T4_VITVI Putative uncharacterized protein OS=Vitis... 78 3e-13
tr|B6UCW8|B6UCW8_MAIZE Ferredoxin-thioredoxin reductase, variabl... 77 9e-13
tr|B6TW28|B6TW28_MAIZE Ferredoxin-thioredoxin reductase, variabl... 77 9e-13
tr|A9RF67|A9RF67_PHYPA Intraflagellar transport protein IFT122 O... 76 2e-12
tr|Q7XUM0|Q7XUM0_ORYSJ OSJNBa0074L08.8 protein OS=Oryza sativa s... 74 5e-12
tr|Q6H5V4|Q6H5V4_ORYSJ Os02g0638300 protein OS=Oryza sativa subs... 74 5e-12
tr|Q0JBJ5|Q0JBJ5_ORYSJ Os04g0528800 protein OS=Oryza sativa subs... 74 5e-12
tr|Q01HM9|Q01HM9_ORYSA OSIGBa0115K01-H0319F09.23 protein OS=Oryz... 74 5e-12
tr|A2XVR8|A2XVR8_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12
tr|A2X7M2|A2X7M2_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12
tr|B6U6T1|B6U6T1_MAIZE Ferredoxin-thioredoxin reductase, variabl... 72 3e-11
tr|A9RF65|A9RF65_PHYPA Predicted protein OS=Physcomitrella paten... 72 3e-11
tr|B4FEJ0|B4FEJ0_MAIZE Putative uncharacterized protein OS=Zea m... 71 4e-11
tr|A9SQ16|A9SQ16_PHYPA Predicted protein (Fragment) OS=Physcomit... 71 5e-11
tr|Q94IK1|Q94IK1_SOLTU Subunit A of ferredoxin-thioredoxin-reduc... 70 9e-11
tr|B6TCL0|B6TCL0_MAIZE Ferredoxin-thioredoxin reductase, variabl... 68 4e-10
tr|Q3MG59|Q3MG59_ANAVT Ferredoxin thioredoxin reductase, alpha c... 61 4e-08
tr|Q2JNP4|Q2JNP4_SYNJB Ferredoxin-thioredoxin reductase, variabl... 60 9e-08
tr|Q8YU85|Q8YU85_ANASP Ferredoxin-thioredoxin reductase variable... 58 3e-07
tr|A3AVS6|A3AVS6_ORYSJ Putative uncharacterized protein OS=Oryza... 58 4e-07
tr|B0JFI4|B0JFI4_MICAN Ferredoxin-thioredoxin reductase variable... 57 7e-07
tr|Q31P58|Q31P58_SYNE7 Ferredoxin-thioredoxin reductase variable... 57 1e-06
tr|B1WXG1|B1WXG1_CYAA5 Ferredoxin thioredoxin reductase, variabl... 56 1e-06

>tr|A8IXL0|A8IXL0_BRACM Lipoic acid synthase-like protein
OS=Brassica campestris PE=2 SV=1
Length = 155

Score = 80.9 bits (198), Expect = 5e-14
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +2

Query: 281 GSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLLDFDGQ- 457
GS IRV+ LKVYHV + P L+G EG+LKD + WKGK +SANLPY V F + +G+
Sbjct: 78 GSSIRVTAPLKVYHVNRVPEVDLEGMEGKLKDYVAVWKGKRISANLPYKVEFFKEVEGRG 137

Query: 458 QVKFFAHLTKDEFE 499
VKF AHL DEFE
Sbjct: 138 PVKFVAHLKDDEFE 151


>tr|Q9FHL4|Q9FHL4_ARATH Similarity to ferredoxin-thioredoxin
reductase variable chain (Putative uncharacterized
protein At5g23440) (At5g23440) OS=Arabidopsis thaliana
GN=At5g23440 PE=2 SV=1
Length = 182

Score = 80.5 bits (197), Expect = 6e-14
Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +2

Query: 242 SSTYGVDAPSPA-FGSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANL 418
SS ++A + A GS +RV+ LKVYHV + P L+G EG+LKD + WKGK +SANL
Sbjct: 91 SSEEEIEAEAKAKIGSRVRVTAPLKVYHVNRVPEVDLEGMEGKLKDYVAVWKGKRISANL 150

Query: 419 PYYVHFLLDFDGQ-QVKFFAHLTKDEFE 499
PY + F + +G+ VKF +HL +DEFE
Sbjct: 151 PYKIEFFKEIEGRGLVKFVSHLKEDEFE 178


>tr|A9NX05|A9NX05_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 100

Score = 80.1 bits (196), Expect = 8e-14
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +2

Query: 281 GSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLLDFDGQQ 460
G ++V LKVYHVPK P F L G EG + D + WKGK +SANLPY + F ++ G+
Sbjct: 25 GDRVKVRGPLKVYHVPKTPEFGLGGIEGVVNDYVGLWKGKRISANLPYKIQFNMEVGGRP 84

Query: 461 VKFFAHLTKDEFE 499
+KF AHL +DEF+
Sbjct: 85 IKFLAHLKEDEFD 97


>tr|Q9FT94|Q9FT94_ARATH Lipoic acid synthase-like protein
OS=Arabidopsis thaliana GN=F8L15_140 PE=4 SV=1
Length = 477

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2

Query: 281 GSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLLDFDGQ- 457
G+ +RV+ LKVYHV + P L G EG +KD ++ WKGK +SANLP+ V F+ + +G+
Sbjct: 400 GARVRVTVPLKVYHVVRVPEVELMGMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRG 459

Query: 458 QVKFFAHLTKDEFE 499
VKFF HL +DEFE
Sbjct: 460 PVKFFTHLKEDEFE 473


>tr|Q8LBP6|Q8LBP6_ARATH Putative uncharacterized protein (At5g08410)
(Putative lipoic acid synthase) OS=Arabidopsis thaliana
GN=At5g08410/F8L15_140 PE=2 SV=1
Length = 184

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2

Query: 281 GSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLLDFDGQ- 457
G+ +RV+ LKVYHV + P L G EG +KD ++ WKGK +SANLP+ V F+ + +G+
Sbjct: 107 GARVRVTVPLKVYHVVRVPEVELMGMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRG 166

Query: 458 QVKFFAHLTKDEFE 499
VKFF HL +DEFE
Sbjct: 167 PVKFFTHLKEDEFE 180


>tr|A9SPT5|A9SPT5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_133320 PE=4 SV=1
Length = 94

Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = +2

Query: 221 AVEINGVSSTYGVDAPSPAFGSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGK 400
AVE+ G S+ G G+ +RV LKVYHVPK+P + G EGE+K+++ ++KGK
Sbjct: 2 AVELGGSRSSEG--EKKVEVGTKVRVKGSLKVYHVPKNPELDIDGLEGEVKEVVTTFKGK 59

Query: 401 PLSANLPYYVHFLLDFDGQQVKFFAHLTKDEFE 499
P+SA PY V L+ + KFF HL DEFE
Sbjct: 60 PVSATFPYKVQ-LVTMGEESRKFFVHLKDDEFE 91


>tr|A7QNQ7|A7QNQ7_VITVI Chromosome undetermined scaffold_133, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00002625001 PE=4 SV=1
Length = 149

Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Frame = +2

Query: 212 CETAVEINGVSSTYGV-------DAPSPA--FGSVIRVSKHLKVYHVPKHPSFYLQGCEG 364
CE A+ + +S+ DA A G+ +RV LKV+HVP+ P L G EG
Sbjct: 39 CEVALRSDSATSSSSAAFEQVQEDAAEEAGKIGARVRVKVPLKVFHVPRVPEVDLTGMEG 98

Query: 365 ELKDILISWKGKPLSANLPYYVHFLLDFDGQ-QVKFFAHLTKDEFE 499
LK + WKGK +SANLP+ + F+ D +G+ VKFFAHL DEFE
Sbjct: 99 VLKQYVGVWKGKRISANLPFKIGFVADIEGRGPVKFFAHLKDDEFE 144


>tr|A5B8T4|A5B8T4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_024425 PE=4 SV=1
Length = 168

Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Frame = +2

Query: 212 CETAVEINGVSSTYGV-------DAPSPA--FGSVIRVSKHLKVYHVPKHPSFYLQGCEG 364
CE A+ + +S+ DA A G+ +RV LKV+HVP+ P L G EG
Sbjct: 58 CEVALRSDSATSSSSAAFEQVQEDAAEEAGKIGARVRVKVPLKVFHVPRVPEVDLTGMEG 117

Query: 365 ELKDILISWKGKPLSANLPYYVHFLLDFDGQ-QVKFFAHLTKDEFE 499
LK + WKGK +SANLP+ + F+ D +G+ VKFFAHL DEFE
Sbjct: 118 VLKQYVGVWKGKRISANLPFKIGFVADIEGRGPVKFFAHLKDDEFE 163


>tr|B6UCW8|B6UCW8_MAIZE Ferredoxin-thioredoxin reductase, variable
chain OS=Zea mays PE=2 SV=1
Length = 157

Score = 76.6 bits (187), Expect = 9e-13
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2

Query: 263 APSPAFGSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLL 442
A +P G +RV+ L+VYHV K P +QG EG +K + WKGK ++AN P+ V F L
Sbjct: 72 AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEFEL 131

Query: 443 DFDGQ--QVKFFAHLTKDEFE 499
+GQ V+FFAHL +DEFE
Sbjct: 132 AVEGQPKPVRFFAHLREDEFE 152


>tr|B6TW28|B6TW28_MAIZE Ferredoxin-thioredoxin reductase, variable
chain OS=Zea mays PE=2 SV=1
Length = 153

Score = 76.6 bits (187), Expect = 9e-13
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2

Query: 263 APSPAFGSVIRVSKHLKVYHVPKHPSFYLQGCEGELKDILISWKGKPLSANLPYYVHFLL 442
A +P G +RV+ L+VYHV K P +QG EG +K + WKGK ++AN P+ V F L
Sbjct: 68 AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEFEL 127

Query: 443 DFDGQ--QVKFFAHLTKDEFE 499
+GQ V+FFAHL +DEFE
Sbjct: 128 AVEGQPKPVRFFAHLREDEFE 148