DK960233
Clone id TST39A01NGRL0006_N18
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_N18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGAGCAGCACCAGAGCTACTTCGAAAACTTATACCAGAGCATGTGAAGCGGCACTTCTAG
TGGTGGTTGGAAATGTCATTTTGGACTATTACTCTACTTGATAGCGAGTGGATATTTTTA
CGCGCATTACACGTAAGATACAAGGCTGCAATGCTGTTGTGGATGGGAAGTTGGTCAGGA
TGGTGTTGCTGGATCAGAAGTTGGTGAAAATCGCCGCTCTGCTGGCTACCTCACTCGGTG
TCTTGGTAACGCTTTTTGTGATATGAGCCTTATTGTGCTACGGGATGCGTCCCATGAGGT
TGAACACCCCCCCCCCCCCCCCCCCCCCCAACCAAACCCCCGGGGGGGCGGGCTTTTTTG
GGGGGGGGGGCAATTTTTTTTTGGAGGCCCCATTTTAGAAAATCCCAATTGGGATAGAGG
TAAGTTGATGCCTTTAAAAAAAGGCTTTTTCTTTCCCCCTTAATTTCCAGCGGTTTTTGG
GTTTATAAAAGCAGCCCCCTGCAAAAATCGGGGTTTAGTGTATAATAGAGATCTTACTCT
TTTTTTTGGGTATATTTCGGAGGGAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q39010
Definition sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta OS=Arabidopsis thaliana
Align length 17
Score (bit) 31.6
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960233|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_N18, 5'
(564 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta OS=Arabi... 32 2.9
sp|Q39011|KSG7_ARATH Shaggy-related protein kinase eta OS=Arabid... 31 4.9
sp|Q5I0C3|MCCA_RAT Methylcrotonoyl-CoA carboxylase subunit alpha... 30 6.3
sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase subunit alp... 30 8.2
sp|Q8DIC3|LNT_THEEB Apolipoprotein N-acyltransferase OS=Thermosy... 30 8.3

>sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta
OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2
Length = 412

Score = 31.6 bits (70), Expect = 2.9
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1

Query: 1 GAAPELLRKLIPEHVKR 51
GA+PEL+ +LIPEHV+R
Sbjct: 384 GASPELINRLIPEHVRR 400


>sp|Q39011|KSG7_ARATH Shaggy-related protein kinase eta
OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2
Length = 380

Score = 30.8 bits (68), Expect = 4.9
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +1

Query: 1 GAAPELLRKLIPEHVKR 51
G++PEL+ KLIP+H+KR
Sbjct: 352 GSSPELVNKLIPDHIKR 368


>sp|Q5I0C3|MCCA_RAT Methylcrotonoyl-CoA carboxylase subunit alpha,
mitochondrial OS=Rattus norvegicus GN=Mccc1 PE=1 SV=1
Length = 715

Score = 30.4 bits (67), Expect = 6.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2

Query: 221 QSGDFHQLLIQQHHPDQLPIHNSIA 147
++G+ H I QHH D LP H++IA
Sbjct: 476 EAGNVHTDFIPQHHKDLLPTHSTIA 500


>sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase subunit alpha,
mitochondrial OS=Mus musculus GN=Mccc1 PE=2 SV=2
Length = 717

Score = 30.0 bits (66), Expect = 8.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2

Query: 221 QSGDFHQLLIQQHHPDQLPIHNSIA 147
++G+ H I QHH D LP H++IA
Sbjct: 476 EAGNVHTDFIPQHHKDLLPSHSTIA 500


>sp|Q8DIC3|LNT_THEEB Apolipoprotein N-acyltransferase
OS=Thermosynechococcus elongatus (strain BP-1) GN=lnt
PE=3 SV=1
Length = 506

Score = 30.0 bits (66), Expect = 8.3
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1

Query: 64 WLEMSFWTITLLDSEWIFLRALHVRYKAA--MLLWMGSWSGWCCWIRSW*KSPLCWLPHS 237
WL +S W +L W L A + ++A LLW + WC W SPL W+ S
Sbjct: 106 WLCLSSWG-AVLSGSWALLMARYGVRRSAPWQLLW--GVTLWCALEALWSHSPLWWISLS 162

Query: 238 VS 243
++
Sbjct: 163 LT 164


tr_hit_id B4QNQ7
Definition tr|B4QNQ7|B4QNQ7_DROSI GD14223 OS=Drosophila simulans
Align length 40
Score (bit) 35.8
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960233|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_N18, 5'
(564 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4QNQ7|B4QNQ7_DROSI GD14223 OS=Drosophila simulans GN=GD14223... 36 1.7
tr|A1WKL4|A1WKL4_VEREI Major facilitator superfamily MFS_1 OS=Ve... 34 4.9
tr|Q7NDY9|Q7NDY9_GLOVI Glr4093 protein OS=Gloeobacter violaceus ... 33 8.2
tr|A9PGS5|A9PGS5_POPTR Putative uncharacterized protein OS=Popul... 33 8.3

>tr|B4QNQ7|B4QNQ7_DROSI GD14223 OS=Drosophila simulans GN=GD14223
PE=4 SV=1
Length = 664

Score = 35.8 bits (81), Expect = 1.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2

Query: 266 SYHKKRYQDTE*GSQQSGDFHQLLIQQHHPDQLPIHNSIA 147
+YH++ Q + QQ HQ QQ HP QLPIH++ A
Sbjct: 122 AYHEQLRQQQQHQQQQQQHQHQQQQQQQHPKQLPIHSTAA 161


>tr|A1WKL4|A1WKL4_VEREI Major facilitator superfamily MFS_1
OS=Verminephrobacter eiseniae (strain EF01-2)
GN=Veis_2425 PE=4 SV=1
Length = 427

Score = 34.3 bits (77), Expect = 4.9
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1

Query: 16 LLRKLIPEHVKRHF*WWLEMSFWTITLLDSEWIFLRA------LHVRYKAAMLLWMGSW 174
L+ ++PEH K+ +LEM+ + L S W F R H Y A LWMG W
Sbjct: 196 LILAVVPEHPKKQETRFLEMAA-AVKQLYSSWSFWRLGLYSIFAHATYMAVQGLWMGPW 253


>tr|Q7NDY9|Q7NDY9_GLOVI Glr4093 protein OS=Gloeobacter violaceus
GN=glr4093 PE=4 SV=1
Length = 510

Score = 33.5 bits (75), Expect = 8.2
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2

Query: 224 QQSGDFHQLLIQQHHPDQLPIHNSIAALYLTCNARKNIHSLSSRVIVQND 75
QQ+ Q L+ +HHPD L N++A LY N + +L RV+ + +
Sbjct: 318 QQALAVQQDLLGEHHPDTLTTLNNLAVLYRDQNRLEEAQNLFERVLKERE 367


>tr|A9PGS5|A9PGS5_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 380

Score = 33.5 bits (75), Expect = 8.3
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1

Query: 1 GAAPELLRKLIPEHVKR 51
GA+PEL+ KLIPEHVKR
Sbjct: 352 GASPELVNKLIPEHVKR 368