DK960244 |
Clone id |
TST39A01NGRL0006_O06 |
Library |
TST39 |
Length |
672 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_O06. 5' end sequence. |
Accession |
DK960244 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1920Contig1 |
Sequence |
GACAAGGTGACAAATGGCAGTGTGGGCGATTCCCAAGGAAGCTCTGTGCGTACGTTTGTA AGGTGAAGGACCTCTGAGGAGCTGCAGCGTCTCTCCATGGCCAGCTTCGGTTGCATTCAT CAGGCCATAGCCAGATTGCAGGCGGTTTCAGCGTCGCAATTGCAGCTGGAGCCCGTTTGT GTTGGACCCTTCCGGGCCCCTTTTGAAAGAAAGCTTCAAGCTTTTGCTCACTTCAAGAGA CCCGAGCTCTCCATCCACTCTGCAGTTCGCTCGGGCCTGCTGGTCTTTGCTACCGCGAGC CAAGACACAGCCACCCCTACTTTGGTGTTGCAGGAGGTTGATTTTGTATGGAAGGGAAAA GGTTCACAGGTACTTTTAACAGGCGATTTTCTTGACTGGGACGCAAAGGTGTCGCTTGAG AAGGGAACCGACGGGGCATTTCACTACAAGCAGAAACTCTCTCCTGGAACCTACAAGTAC AAGTATATCATAGATGGAGAGTGGGCTCATTCTCCGGATTGTCCTATGATTGAGGACGGC AAAGGTGGTTACAACAATCANATTATCATTACAGATGGACCACTTGCTTCGACGAACTCA CTTACACAAGAAAGTTCACCAAAAGAAACAGCAGGTGGTCAGGACACAGGGAAGCCAGCG CCAAAAGCTGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O43741 |
Definition |
sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens |
Align length |
121 |
Score (bit) |
58.5 |
E-value |
3.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7HM94 |
Definition |
tr|A7HM94|A7HM94_FERNB Glycoside hydrolase family 13 domain protein OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) |
Align length |
101 |
Score (bit) |
68.6 |
E-value |
4.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960244|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_O06, 5' (672 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7HM94|A7HM94_FERNB Glycoside hydrolase family 13 domain prot... 69 4e-10 tr|Q9LFY0|Q9LFY0_ARATH T7N9.13 OS=Arabidopsis thaliana GN=At1g27... 68 5e-10 tr|Q54UG7|Q54UG7_DICDI Putative glycoside hydrolase OS=Dictyoste... 68 5e-10 tr|Q9SSA3|Q9SSA3_ARATH F4P13.6 protein OS=Arabidopsis thaliana G... 67 8e-10 tr|Q8LCU3|Q8LCU3_ARATH Putative uncharacterized protein OS=Arabi... 67 8e-10 tr|A9RJG5|A9RJG5_PHYPA Predicted protein OS=Physcomitrella paten... 65 4e-09 tr|A9UYP2|A9UYP2_MONBE Predicted protein OS=Monosiga brevicollis... 65 4e-09 tr|A4RUZ4|A4RUZ4_OSTLU Predicted protein OS=Ostreococcus lucimar... 64 9e-09 tr|Q6AVV5|Q6AVV5_ORYSJ Isoamylase N-terminal domain containing p... 64 1e-08 tr|Q10F03|Q10F03_ORYSJ Isoamylase N-terminal domain containing p... 64 1e-08 tr|B8Q890|B8Q890_ORYSI SKIP interacting protein 4 (Fragment) OS=... 64 1e-08 tr|B8APL9|B8APL9_ORYSI Putative uncharacterized protein OS=Oryza... 64 1e-08 tr|A3ALJ0|A3ALJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 64 1e-08 tr|Q5DEQ6|Q5DEQ6_SCHJA SJCHGC00891 protein OS=Schistosoma japoni... 64 1e-08 tr|A7Y9I6|A7Y9I6_BOMMO AMP-activated protein kinase beta subunit... 64 1e-08 tr|B7GKY4|B7GKY4_9BACI Alpha-amylase/pullulanase OS=Anoxybacillu... 63 1e-08 tr|Q0V3C0|Q0V3C0_PHANO Putative uncharacterized protein OS=Phaeo... 63 2e-08 tr|B2VYL5|B2VYL5_PYRTR Putative uncharacterized protein OS=Pyren... 63 2e-08 tr|A7TTP9|A7TTP9_VANPO Putative uncharacterized protein OS=Vande... 62 3e-08 tr|B8C041|B8C041_THAPS Predicted protein OS=Thalassiosira pseudo... 62 3e-08 tr|Q5BU46|Q5BU46_AEDAE AMPK-beta subunit OS=Aedes aegypti GN=AMP... 62 3e-08 tr|Q17IU7|Q17IU7_AEDAE 5-amp-activated protein kinase, beta subu... 62 3e-08 tr|Q17IU6|Q17IU6_AEDAE 5-amp-activated protein kinase, beta subu... 62 3e-08 tr|A8BQL1|A8BQL1_GIALA 5'-AMP-activated protein kinase, beta-1 s... 62 3e-08 tr|Q55DB7|Q55DB7_DICDI Putative uncharacterized protein OS=Dicty... 62 4e-08 tr|B7G0Q5|B7G0Q5_PHATR Predicted protein OS=Phaeodactylum tricor... 61 6e-08 tr|B0WBL5|B0WBL5_CULQU AMPK-beta subunit OS=Culex quinquefasciat... 61 6e-08 tr|A7SRX9|A7SRX9_NEMVE Predicted protein OS=Nematostella vectens... 61 6e-08 tr|A8JHV0|A8JHV0_CHLRE Predicted protein OS=Chlamydomonas reinha... 61 7e-08 tr|B6N2S1|B6N2S1_BRAFL Putative uncharacterized protein OS=Branc... 61 7e-08
>tr|A7HM94|A7HM94_FERNB Glycoside hydrolase family 13 domain protein OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1180 PE=4 SV=1 Length = 648
Score = 68.6 bits (166), Expect = 4e-10 Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Frame = +1
Query: 334 EVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGE-WAH 510 +V F +K + + V L G+F +W+ K TDG + Y+ +L PG+Y+YKY+IDG+ W Sbjct: 32 KVVFTFKAEANVVYLAGNFNNWNPTAWPMKLTDGVWTYEVELKPGSYQYKYVIDGKTWKE 91
Query: 511 SPDCP-MIEDGKGGYNNXIIIT-DGPLASTNSLTQESSPKE 627 P+ P ++DG GG N +T DG + TQ+S K+ Sbjct: 92 DPEAPAYVDDGFGGKNGAFTLTADGKILGEQG-TQQSQGKK 131
Score = 44.3 bits (103), Expect = 0.007 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 11/107 (10%) Frame = +1
Query: 370 VLLTGDFLDWDAKVSLEKGTD-GAFHYKQKLSPGTYKYKYIIDGEWAHSPDC-PMIEDGK 543 V + G F +W+ K + D G + +LSPG Y+YK+IIDG W P+ +DG Sbjct: 162 VFIAGSFNNWNDKDTECYYVDAGWWEAVLELSPGIYEYKFIIDGNWTVDPNAFGYTDDGF 221
Query: 544 GGYNNXI--------IITDGPLASTNSL-TQESSPKETAGGQDTGKP 657 GG N + +I P +T S +E +E +T KP Sbjct: 222 GGKNAVLEVAKEGGKLIVRAPQNATKSEGAKEEKTQEQVTTAETVKP 268
Score = 41.6 bits (96), Expect = 0.046 Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Frame = +1
Query: 346 VWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYI--IDGE--WAHS 513 V K + L G F W+ K + +G + L PGTY+YKY+ I G W Sbjct: 281 VKKENAQEAYLAGSFNSWNPKALKMQLVNGYWVASLVLQPGTYEYKYVFLIGGNYVWEED 340
Query: 514 PDCPMIE-DGKGGYNN--XIIITDGPLASTNSLTQESSPKETAGG 639 P+ P + DG GG N ++ DG + S L Q TAGG Sbjct: 341 PNAPGYKSDGYGGKNGIFKLVQKDGKI-SIEELQQ------TAGG 378
>tr|Q9LFY0|Q9LFY0_ARATH T7N9.13 OS=Arabidopsis thaliana GN=At1g27070 PE=4 SV=1 Length = 532
Score = 68.2 bits (165), Expect = 5e-10 Identities = 31/82 (37%), Positives = 46/82 (56%) Frame = +1
Query: 325 VLQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEW 504 +L+ VW S+VLLTG F W + ++K +G F KL PG Y+ K+I+DG+W Sbjct: 451 LLRTASIVWPNSASEVLLTGSFDGWSTQRKMKKAENGVFSLSLKLYPGKYEIKFIVDGQW 510
Query: 505 AHSPDCPMIEDGKGGYNNXIII 570 P P++ GGY N ++I Sbjct: 511 KVDPLRPIVT--SGGYENNLLI 530
>tr|Q54UG7|Q54UG7_DICDI Putative glycoside hydrolase OS=Dictyostelium discoideum GN=prkab PE=4 SV=1 Length = 347
Score = 68.2 bits (165), Expect = 5e-10 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 3/107 (2%) Frame = +1
Query: 310 ATPTLVLQEVD--FVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYK 483 A P + Q V F W G G V ++G F +W K+ L + ++ F L+PG ++YK Sbjct: 147 AQPIITEQAVPTVFTWSGGGKDVYVSGSFNNWKEKIPLSR-SEKDFTLIYNLAPGVHQYK 205
Query: 484 YIIDGEWAHSPDCPMIEDGKGGYNNXIIITD-GPLASTNSLTQESSP 621 YI+DG+W HS + P+ D KG N I + + P N+L S+P Sbjct: 206 YIVDGKWIHSTEQPVAADIKGNLLNFIEVKNKDPSNDLNTLKLSSTP 252
>tr|Q9SSA3|Q9SSA3_ARATH F4P13.6 protein OS=Arabidopsis thaliana GN=F4P13.6 PE=4 SV=1 Length = 716
Score = 67.4 bits (163), Expect = 8e-10 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Frame = +1
Query: 277 LLVFATASQDTATPTLVLQEVDFVWKG-KGSQVLLTGDFL-DWDAKVSLEKGTDGAFHYK 450 L+ + TPT V FVW G +G +VLL GDF +W + F + Sbjct: 599 LIAMVDDGKHDGTPT---HSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETE 655
Query: 451 QKLSPGTYKYKYIIDGEWAHSPDCPMIEDGKGGYNNXIIITD 576 +L+ G Y YKYII+G+W HS P D +G NN I++ D Sbjct: 656 VRLTQGKYYYKYIINGDWRHSATSPTERDDRGNTNNIIVVGD 697
>tr|Q8LCU3|Q8LCU3_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 591
Score = 67.4 bits (163), Expect = 8e-10 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Frame = +1
Query: 277 LLVFATASQDTATPTLVLQEVDFVWKG-KGSQVLLTGDFL-DWDAKVSLEKGTDGAFHYK 450 L+ + TPT V FVW G +G +VLL GDF +W + F + Sbjct: 440 LIAMVDDGKHDGTPT---HSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETE 496
Query: 451 QKLSPGTYKYKYIIDGEWAHSPDCPMIEDGKGGYNNXIIITD 576 +L+ G Y YKYII+G+W HS P D +G NN I++ D Sbjct: 497 VRLTQGKYYYKYIINGDWRHSATSPTERDDRGNTNNIIVVGD 538
>tr|A9RJG5|A9RJG5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175490 PE=4 SV=1 Length = 265
Score = 65.1 bits (157), Expect = 4e-09 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Frame = +1
Query: 142 AVSASQLQLEP-VCVGPFRAPFERKLQAFAHFKRPELSIHSAVRSGLLVFATASQDTATP 318 +V+ S L P V + P P E L +A KR + + ++ ++ AT Sbjct: 26 SVARSPLTFNPQVPMVPISKPNELNLGGYAQAKRTQQQNYYET----CLYGEPEKEVATM 81
Query: 319 TLVLQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEK-GTDGAFHYKQKLSPGTYKYKYIID 495 VW G V + G + +W + SL++ G D F + L PG Y+YK+ +D Sbjct: 82 --------IVWSHGGVHVGVIGSWDNWQVRQSLQRSGRD--FTLVKVLPPGVYQYKFWVD 131
Query: 496 GEWAHSPDCPMIEDGKGGYNNXIIITDGPLASTNSLTQESSPKETAGGQDTGKPAPK 666 G W +SPD P + DG NN + + D + +S+ P+ + P P+ Sbjct: 132 GHWRYSPDLPAVSDGPNNLNNMLDVQDYVPENLDSVAGFDPPRSPDSSYNDPLPGPE 188
>tr|A9UYP2|A9UYP2_MONBE Predicted protein OS=Monosiga brevicollis GN=25195 PE=4 SV=1 Length = 324
Score = 65.1 bits (157), Expect = 4e-09 Identities = 27/78 (34%), Positives = 40/78 (51%) Frame = +1
Query: 331 QEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWAH 510 QE+ W G + + G F W V + + DG F K L+PG+Y+YK+I+D EW H Sbjct: 128 QEITVTWTHGGQDIRIAGTFNHWGDPVKMTRRPDGVFEAKLLLAPGSYEYKFIVDREWKH 187
Query: 511 SPDCPMIEDGKGGYNNXI 564 P + + G NN + Sbjct: 188 DARLPTLRNSFGSVNNLL 205
>tr|A4RUZ4|A4RUZ4_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_33884 PE=4 SV=1 Length = 272
Score = 63.9 bits (154), Expect = 9e-09 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 3/107 (2%) Frame = +1
Query: 310 ATPTLVLQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYI 489 AT L V W G+ V + G F +W ++ +L + + F L PG Y+YK+I Sbjct: 78 ATTEPALVPVAINWTQGGNSVEVEGSFDNWQSRQTLHRSGNREFAIVMSLRPGVYQYKFI 137
Query: 490 IDGEWAHSPDCPMIEDGKGGYNNXIIITD---GPLASTNSLTQESSP 621 +DG+W ++PD P + D G NN + + + L S ++ T +SP Sbjct: 138 VDGQWKYAPDQPAMYDEIGNVNNVLEVQEYVPEILDSLDAFTAPASP 184
>tr|Q6AVV5|Q6AVV5_ORYSJ Isoamylase N-terminal domain containing protein OS=Oryza sativa subsp. japonica GN=OSJNBb0024N19.10 PE=4 SV=1 Length = 466
Score = 63.5 bits (153), Expect = 1e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +1
Query: 328 LQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWA 507 L+ V VW S+VLLTG F W ++ +E+ G F +L PG Y+ K+I+DG W Sbjct: 386 LRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWR 445
Query: 508 HSPDCPMIEDGKGGYNNXIIIT 573 + P P++ + G NN + +T Sbjct: 446 NDPLRPLVSN-NGHENNLLTVT 466
>tr|Q10F03|Q10F03_ORYSJ Isoamylase N-terminal domain containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g48170 PE=4 SV=1 Length = 529
Score = 63.5 bits (153), Expect = 1e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +1
Query: 328 LQEVDFVWKGKGSQVLLTGDFLDWDAKVSLEKGTDGAFHYKQKLSPGTYKYKYIIDGEWA 507 L+ V VW S+VLLTG F W ++ +E+ G F +L PG Y+ K+I+DG W Sbjct: 449 LRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWR 508
Query: 508 HSPDCPMIEDGKGGYNNXIIIT 573 + P P++ + G NN + +T Sbjct: 509 NDPLRPLVSN-NGHENNLLTVT 529
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