| DK960245 |
| Clone id |
TST39A01NGRL0006_O07 |
| Library |
TST39 |
| Length |
478 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_O07. 5' end sequence. |
| Accession |
DK960245 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
GCATATGATGCTGCAAAGGCGGTTGAAAGTTTGAATGCAAATGGTTCAATGAAAAAGAGT
GGTATGTGGGGCCAGCTCCGAAAAAGTCAGAGAGGGAGGCTGATTTATAGGCCAGGTATG
AACAACTTCAGAAGGAAAAGATTGAGAACTCGCACGGCGCATATCTGTACCTGAAAAACA
TCGATAATGAAATAAAACATAACAAATTGAAAGAATTGCTCTCACCTTACAGAACAGTCT
CTTCTTGCGAGATTATGAAAACTCCTCACGGTCAAAGCATGGATTCTGGATTTGATTCCT
TTTTGACTCCACAAGAAGCTACTCGGGCTGTAAATGATATGAATGCAAAGATGGTAGGAG
CCAAGCCTCTCTCTCTCGCTCAAGCTCAGAGGAAAAAGGATAGGCGGGCTAGATTGCACG
CCCCATTCGATCACTTACTCACTTCTGCCATGAATGCTCCTCCTGTGACAGCAAGCCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P42731 |
| Definition |
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana |
| Align length |
136 |
| Score (bit) |
118.0 |
| E-value |
2.0e-26 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960245|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_O07, 5'
(478 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 118 2e-26
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 103 5e-22
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido... 96 8e-20
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 94 4e-19
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 92 9e-19
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ... 92 9e-19
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 92 1e-18
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 91 2e-18
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 91 2e-18
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 91 3e-18
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ... 91 3e-18
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 90 5e-18
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 90 5e-18
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 90 5e-18
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 90 5e-18
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 90 5e-18
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 90 5e-18
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho... 90 6e-18
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ... 89 8e-18
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ... 89 8e-18
sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic ... 89 1e-17
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 87 4e-17
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ... 87 5e-17
sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic ... 86 7e-17
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa... 86 7e-17
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 86 8e-17
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 86 1e-16
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila... 84 2e-16
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 84 2e-16
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ... 83 7e-16
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2
OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
Length = 629
Score = 118 bits (295), Expect = 2e-26
Identities = 60/136 (44%), Positives = 84/136 (61%)
Frame = +3
Query: 45 FNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLS 224
F++KEWYVG A KKSERE +L RYEQ KE + + LY+KN+D I KLKE+ S
Sbjct: 280 FDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFS 339
Query: 225 PYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXXXX 404
P+ TV+S ++M+ P+G S SGF +F TP+EAT A++ ++ KM+ +KPL +
Sbjct: 340 PFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDR 399
Query: 405 XXXLHAPFDHLLTSAM 452
L A F + AM
Sbjct: 400 RVRLQAQFSQVRPVAM 415
Score = 49.3 bits (116), Expect = 9e-06
Identities = 30/99 (30%), Positives = 47/99 (47%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ YVGP ++ ER++ K K N +Y+KN+ + LK
Sbjct: 190 NDKQVYVGPFLRRQERDSTA-------NKTKFTN-----VYVKNLAESTTDDDLKNAFGE 237
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
Y ++S +MK G+S GF +F +A RAV +N
Sbjct: 238 YGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLN 276
Score = 45.4 bits (106), Expect = 1e-04
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
+ S +++KN+D I H L + S + + SC++ GQS GF + + A
Sbjct: 118 VRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESA 177
Query: 321 TRAVNDMNAKMVGAK 365
+A+ +N ++ K
Sbjct: 178 QKAIEKLNGMLLNDK 192
Score = 31.6 bits (70), Expect = 1.9
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKT-PHGQSMDSGFDSFLTPQEATRAVNDM 341
LY+ ++D + ++L + TV + + + +S+ G+ +F PQ+A RA+ ++
Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 342 NAKMVGAKPL 371
N + KP+
Sbjct: 98 NYIPLYGKPI 107
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3
OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1
Length = 660
Score = 103 bits (256), Expect = 5e-22
Identities = 53/125 (42%), Positives = 74/125 (59%)
Frame = +3
Query: 63 YVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVS 242
YVG A KKSERE +L ++EQ + + E S GA LYLKN+D+ + KLKE+ S Y V+
Sbjct: 300 YVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVT 359
Query: 243 SCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXXXXXXXLHA 422
S ++M P G S GF ++ P+EA RA+++MN KM+G KPL + L A
Sbjct: 360 SSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQA 419
Query: 423 PFDHL 437
F +
Sbjct: 420 LFSQI 424
Score = 40.4 bits (93), Expect = 0.004
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+D I + L E S + T+ SC++ G+S GF F + A A++ +N
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 345 AKMVGAK 365
++ K
Sbjct: 198 GMLMNDK 204
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5
OS=Arabidopsis thaliana GN=PAB5 PE=2 SV=2
Length = 668
Score = 95.9 bits (237), Expect = 8e-20
Identities = 46/103 (44%), Positives = 66/103 (64%)
Frame = +3
Query: 63 YVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVS 242
YVG A KKS+RE +L ++EQ + + E G+ LYLKN+D+ + KLKE+ S Y V+
Sbjct: 296 YVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVT 355
Query: 243 SCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
SC++M G S GF ++ P+EA A+ +MN KM+G KPL
Sbjct: 356 SCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPL 398
Score = 52.0 bits (123), Expect = 1e-06
Identities = 33/104 (31%), Positives = 52/104 (50%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ +VG ++ +R AR E N +Y+KN+ EI ++LK+
Sbjct: 198 NDKQVFVGHFVRRQDR-----ARSESGAVPSFTN-----VYVKNLPKEITDDELKKTFGK 247
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVG 359
Y +SS +MK G S GF +F++P+ A AV MN +G
Sbjct: 248 YGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLG 291
Score = 39.7 bits (91), Expect = 0.007
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+D I + L E S + T+ SC++ G+S GF F + A A++ +N
Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 193
Query: 345 AKMVGAK 365
++ K
Sbjct: 194 GMLLNDK 200
>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2
Length = 653
Score = 93.6 bits (231), Expect = 4e-19
Identities = 46/111 (41%), Positives = 69/111 (62%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K + K+ YVG A KK ERE +L RYEQ++ EK+ G L++KN+ +E+ +LK
Sbjct: 324 KEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAE 383
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
S + T++S +IM G+S GF + TP+EA +AV +MN +M+ KPL
Sbjct: 384 FSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPL 434
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/136 (22%), Positives = 60/136 (44%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ YVG + ER++ + + K N +Y+KN+D EI + +L
Sbjct: 234 NDKKVYVGHHVSRRERQSKV-----EALKANFTN-----VYIKNLDTEITEQEFSDLFGQ 283
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXXXXX 407
+ ++S ++K + + GF ++ + A +AV+++N K K L +
Sbjct: 284 FGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHERE 343
Query: 408 XXLHAPFDHLLTSAMN 455
L ++ + MN
Sbjct: 344 EELRKRYEQMKLEKMN 359
Score = 34.3 bits (77), Expect = 0.29
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+D I + L + S + + SC++ G + GF F + + A A+ +N
Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVN 229
Query: 345 AKMVGAK 365
++ K
Sbjct: 230 GMLLNDK 236
>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1
Length = 661
Score = 92.4 bits (228), Expect = 9e-19
Identities = 46/111 (41%), Positives = 69/111 (62%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K N ++ YVG A KK ER +L +YE ++ EK+ G L++KN+D +I KL+E
Sbjct: 311 KEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEE 370
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
P+ T++S ++M G+S GF F TP+EAT+A+ +MN +MV KPL
Sbjct: 371 FKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPL 421
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAY--LYLKNIDNEIKHNKLKELL 221
N++E YVG K +RE+ K+E Y +Y+KNID + +EL
Sbjct: 221 NDREVYVGKHVSKKDRES------------KLEEMKANYTNIYVKNIDLAYTEKEFEELF 268
Query: 222 SPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
+P+ ++S + K G+S GF +F + A +AV ++N K + + +
Sbjct: 269 APFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKI 318
Score = 30.4 bits (67), Expect = 4.2
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+ I + L + S + + S ++ GQS GF + T + A A+ +N
Sbjct: 157 IFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVN 216
Query: 345 AKMV 356
++
Sbjct: 217 GMLL 220
>sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1
Length = 592
Score = 92.4 bits (228), Expect = 9e-19
Identities = 46/111 (41%), Positives = 67/111 (60%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K F + YVG A KK ER +L +YEQ + EK+ G L++KN+D+ I KLKE
Sbjct: 294 KEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEE 353
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
+PY T++S +M+ G S GF F +P+EAT+A+ + N ++V KPL
Sbjct: 354 FAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPL 404
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +3
Query: 120 EQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDS 299
+++ K + ++ +Y+KNID E + ++L S Y + S + K G+ GF +
Sbjct: 218 DRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVN 277
Query: 300 FLTPQEATRAVNDMNAK 350
F+ A +AV ++N K
Sbjct: 278 FVDHNAAAKAVEELNGK 294
Score = 34.3 bits (77), Expect = 0.29
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+ I + L E S + V SC++ +G S GF F +A A+ +N
Sbjct: 140 IFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVN 199
Query: 345 AKMV 356
++
Sbjct: 200 GMLM 203
>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo
sapiens GN=PABPC4 PE=1 SV=1
Length = 644
Score = 92.0 bits (227), Expect = 1e-18
Identities = 45/103 (43%), Positives = 72/103 (69%)
Frame = +3
Query: 63 YVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVS 242
+VG A KK ER+A+L ++EQL++E+I G LY+KN+D+ I KL++ SP+ +++
Sbjct: 262 FVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSIT 321
Query: 243 SCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
S ++M G+S GF F +P+EAT+AV +MN ++VG+KPL
Sbjct: 322 SAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Score = 62.0 bits (149), Expect = 1e-09
Identities = 33/106 (31%), Positives = 57/106 (53%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+++ +VG + EREA+L A+ ++ +Y+KN E+ LKEL S
Sbjct: 164 NDRKVFVGRFKSRKEREAELGAKAKEFTN----------VYIKNFGEEVDDESLKELFSQ 213
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAK 365
+ S ++M+ P+G+S GF S+ ++A +AV +MN K + K
Sbjct: 214 FGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259
Score = 34.7 bits (78), Expect = 0.22
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+D I + L + S + + SC+++ +G S F F T + A +A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMN 159
Query: 345 AKMV 356
++
Sbjct: 160 GMLL 163
>sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1
Length = 629
Score = 91.3 bits (225), Expect = 2e-18
Identities = 45/111 (40%), Positives = 69/111 (62%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K N ++ YVG A KK ER +L +YE ++ EK+ G L++KN+D+ I KL+E
Sbjct: 296 KEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEE 355
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
P+ T++S ++M G+S GF F TP+EAT+A+ +MN +M+ KPL
Sbjct: 356 FKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPL 406
Score = 49.7 bits (117), Expect = 7e-06
Identities = 28/108 (25%), Positives = 57/108 (52%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N++E +VG K +RE+ ++E+++ ++ +Y+KNID ++L SP
Sbjct: 206 NDREVFVGKHISKKDRES----KFEEMK------ANFTNIYVKNIDLNYSEESFEKLFSP 255
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
+ ++S + K G+S GF +F + A +AV ++N K + + +
Sbjct: 256 FGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKI 303
Score = 35.4 bits (80), Expect = 0.13
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+ I + L + S + + SC++ GQS GF + T + A A+ ++N
Sbjct: 142 IFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVN 201
Query: 345 AKMV 356
++
Sbjct: 202 GMLL 205
>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein
OS=Xenopus tropicalis GN=epabp PE=2 SV=1
Length = 629
Score = 91.3 bits (225), Expect = 2e-18
Identities = 46/111 (41%), Positives = 73/111 (65%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K N + YVG A K+ ER+ +L ++EQ+++E+I G LY+KN+D+ I ++L++
Sbjct: 254 KEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKE 313
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
SPY T++S ++M T G S GF F +P+EAT+AV +MN ++V KPL
Sbjct: 314 FSPYGTITSAKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
Score = 41.2 bits (95), Expect = 0.002
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+D I + L + S + + SC+++ HG S GF F T + A RA+ MN
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMN 159
Query: 345 AKMV 356
++
Sbjct: 160 GMLL 163
>sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4
Length = 577
Score = 90.9 bits (224), Expect = 3e-18
Identities = 44/108 (40%), Positives = 70/108 (64%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N ++ YVG A KK+ER L +YE + EK+ G L++KN+D+ + KL+E +P
Sbjct: 285 NGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAP 344
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
Y T++S ++M+T +G+S GF F TP+EAT+A+ + N ++V KPL
Sbjct: 345 YGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 392
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/108 (26%), Positives = 54/108 (50%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N +E YV P + ER++ QL++ K +H LY+KNI++E + +EL +
Sbjct: 192 NGQEIYVAPHLSRKERDS-------QLEETK---AHYTNLYVKNINSETTDEQFQELFAK 241
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
+ + S + K G+ GF ++ ++A +AV +N + + L
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKL 289
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q39953 |
| Definition |
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia phyllitidis |
| Align length |
143 |
| Score (bit) |
149.0 |
| E-value |
5.0e-35 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960245|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_O07, 5'
(478 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph... 149 5e-35
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 139 5e-32
tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2 (Fr... 138 2e-31
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 136 6e-31
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 136 6e-31
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten... 134 3e-30
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ... 128 1e-28
tr|A7QRL0|A7QRL0_VITVI Chromosome undetermined scaffold_151, who... 127 4e-28
tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Popul... 126 6e-28
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome... 125 1e-27
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba... 124 2e-27
tr|Q9FXA2|Q9FXA2_ARATH Putative Poly-A Binding Protein OS=Arabid... 124 2e-27
tr|A5C9H4|A5C9H4_VITVI Putative uncharacterized protein OS=Vitis... 124 2e-27
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 124 3e-27
tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment) OS=Nic... 123 5e-27
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen... 123 5e-27
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 121 2e-26
tr|Q8RXR5|Q8RXR5_ARATH Putative poly(A)-binding protein (Fragmen... 118 2e-25
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 117 2e-25
tr|Q00M91|Q00M91_SOYBN Poly(A)-binding protein OS=Glycine max PE... 116 5e-25
tr|Q9C5J0|Q9C5J0_ARATH Putative poly(A) binding protein OS=Arabi... 113 5e-24
tr|O22173|O22173_ARATH Putative poly(A) binding protein OS=Arabi... 113 5e-24
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 111 2e-23
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 110 3e-23
tr|Q9XGW3|Q9XGW3_ORYSA Poly(A)-binding protein (Fragment) OS=Ory... 108 1e-22
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs... 108 1e-22
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22
tr|A4S0L2|A4S0L2_OSTLU Predicted protein OS=Ostreococcus lucimar... 107 2e-22
tr|Q014N8|Q014N8_OSTTA Polyadenylate-binding protein, putative /... 106 5e-22
>tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia
phyllitidis PE=2 SV=1
Length = 638
Score = 149 bits (377), Expect = 5e-35
Identities = 77/143 (53%), Positives = 97/143 (67%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K NEKEWYVG A KKSEREA+L A++EQ++KEK E G LYLKNID+ I KL+EL
Sbjct: 267 KLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSIDDEKLREL 326
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXX 398
+ + TV+SC++MK+P GQSM SGF +F P+EA +AVNDMN KMVG+KPL +
Sbjct: 327 FAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPLYVALAQRKE 386
Query: 399 XXXXXLHAPFDHLLTSAMNAPPV 467
L A F + A NAPP+
Sbjct: 387 ERRARLQAQFAQMQIVAPNAPPM 409
Score = 42.7 bits (99), Expect = 0.009
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
I S A +++KN++ I + L + S + T+ SC ++ G S GF F + A
Sbjct: 108 IRKSGAANIFIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDAGNSKGYGFVQFEKEESA 167
Query: 321 TRAVNDMNAKMVGAKPLSL 377
A+ +N ++ + +S+
Sbjct: 168 QIAIEKVNGMLINDRQVSV 186
>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
Length = 650
Score = 139 bits (351), Expect = 5e-32
Identities = 70/141 (49%), Positives = 94/141 (66%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
+EKEWYVG A KKSEREA+L A++EQ +KE+IE G LYLKN+D+ + KL+EL +
Sbjct: 273 DEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKLRELFAD 332
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXXXXX 407
Y T++SC++M+ P GQS SGF +F +P+EATRAV +MN KMVG+KPL +
Sbjct: 333 YGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVALAQRKEERR 392
Query: 408 XXLHAPFDHLLTSAMNAPPVT 470
L A F + TS A P +
Sbjct: 393 ARLQAAFAQMRTSVSPAVPTS 413
Score = 49.7 bits (117), Expect = 7e-05
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ +VGP ++ ER+ + K N +Y+KN+ + LK +
Sbjct: 182 NDKQVFVGPFVRRQERD-------QSGGVSKFNN-----VYVKNLGENTTEDDLKNVFGA 229
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAK 350
Y T+SS +M+ G+S GF +F P A +AV +N K
Sbjct: 230 YGTISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAVEALNGK 270
Score = 40.8 bits (94), Expect = 0.034
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
I S A +++KN+D I + L + S + + SC++ GQS GF F + A
Sbjct: 110 IRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILSCKVAVDGSGQSKGYGFVQFEQEESA 169
Query: 321 TRAVNDMNAKMVGAK 365
A+ +N ++ K
Sbjct: 170 LTAIEKVNGMLLNDK 184
>tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2
(Fragment) OS=Anemia phyllitidis GN=Pab2 PE=2 SV=1
Length = 472
Score = 138 bits (347), Expect = 2e-31
Identities = 72/146 (49%), Positives = 92/146 (63%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K FN+KEWYVG A KKSEREA+L ++EQL+KE+ E G LYLKN+D+ I KLKEL
Sbjct: 93 KVFNDKEWYVGRAQKKSEREAELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEKLKEL 152
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXX 398
S + TV+SC+IM++P GQ + SGF + + EA RAVN+MN KMVG+KPL +
Sbjct: 153 FSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVAQRKD 212
Query: 399 XXXXXLHAPFDHLLTSAMNAPPVTAS 476
L A F L N P + S
Sbjct: 213 ERRAKLQAQFAQLRNVVANVPQMNGS 238
>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
Length = 647
Score = 136 bits (342), Expect = 6e-31
Identities = 68/132 (51%), Positives = 89/132 (67%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
+EKEWYVG A KKSEREA+L A++EQ +K +IE G LYLKN+D+ + KL+EL +
Sbjct: 269 DEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLDDAVDDEKLRELFAE 328
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXXXXX 407
Y T++SC++MK P GQS SGF +F TP+EATRAV +MN KMVG+KPL +
Sbjct: 329 YGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKPLYVALAQRKEERR 388
Query: 408 XXLHAPFDHLLT 443
L A F + T
Sbjct: 389 VRLQAAFAQMRT 400
Score = 45.1 bits (105), Expect = 0.002
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ +VGP ++ ER DL + +Y+KN+ ++LK++
Sbjct: 178 NDKQVFVGPFVRRQER--DLSGGVSKFNN----------VYVKNLGENTTDDELKKVFGA 225
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAK 350
Y +SS +M+ G+S GF +F +A +AV +N K
Sbjct: 226 YGPISSAVVMRDNEGKSKCFGFVNFELADDAAKAVEALNGK 266
Score = 41.6 bits (96), Expect = 0.020
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
+ S A +++KN+D I + L + S + + SC++ GQS GF F + A
Sbjct: 106 LRKSGAANIFIKNLDKAIDNKALHDTFSAFGGILSCKVATDSSGQSKGYGFVQFEKEESA 165
Query: 321 TRAVNDMNAKMVGAK 365
A+ +N ++ K
Sbjct: 166 QSAIEKVNGMLLNDK 180
>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
Length = 645
Score = 136 bits (342), Expect = 6e-31
Identities = 66/111 (59%), Positives = 84/111 (75%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K F+EKEWYVG A KKSEREA+L A++EQ +KE+IE G LYLKN+D+ I KL+E+
Sbjct: 266 KKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTIDDEKLREI 325
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPL 371
S Y T+ SC++M+ P GQS SGF +F +P EATRAV +MN KMVG+KPL
Sbjct: 326 FSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMNGKMVGSKPL 376
Score = 46.6 bits (109), Expect = 6e-04
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
I S A +++KN+D I + L + + + T+ SC++ P GQS GF F + A
Sbjct: 106 IRKSGTANIFIKNLDKSIDNKALHDTFAAFGTILSCKVATDPSGQSKGYGFVQFEQEESA 165
Query: 321 TRAVNDMNAKMVGAK 365
A+ +N ++ K
Sbjct: 166 QTAIEKVNGMLLNDK 180
Score = 46.2 bits (108), Expect = 8e-04
Identities = 29/106 (27%), Positives = 52/106 (49%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ +VGP ++ ER+ + K N +Y+KN+ + ++LK++
Sbjct: 178 NDKQVFVGPFVRRQERD-------QSGVVSKFNN-----VYVKNLADSTTDDELKKVFEA 225
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAK 365
Y +SS +M+ G+S GF +F +A +AV +N K K
Sbjct: 226 YGPISSAVVMRDNEGKSKCFGFVNFEHADDAAKAVEALNGKKFDEK 271
>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
Length = 439
Score = 134 bits (336), Expect = 3e-30
Identities = 69/144 (47%), Positives = 92/144 (63%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K F+EKEWYVG A KKSEREA+L A++EQ +KE+IE G LYLKN+D+ + K++EL
Sbjct: 266 KKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKIREL 325
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXX 398
+ Y T++SC++M+ GQS SGF +F +P EATRAV +MN KMVG KPL +
Sbjct: 326 FAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMNGKMVGNKPLYVALAQRKE 385
Query: 399 XXXXXLHAPFDHLLTSAMNAPPVT 470
L A F + T A P +
Sbjct: 386 ERRMRLQAAFAQMRTHVGPAVPTS 409
Score = 43.5 bits (101), Expect = 0.005
Identities = 28/106 (26%), Positives = 52/106 (49%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ +VGP ++ ER+ + K N +Y+KN+ + ++LK++
Sbjct: 178 NDKQVFVGPFVRRQERD-------QAGGVSKFNN-----VYVKNLADVTTDDELKKVFGA 225
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAK 365
+ +SS +M+ G+S GF +F P +A +AV + K K
Sbjct: 226 WGPISSAVVMRDNDGKSKCFGFVNFEHPDDAAKAVEALQGKKFDEK 271
Score = 42.0 bits (97), Expect = 0.015
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
I S A +++KN+D I + L + + + + SC++ GQS GF F + A
Sbjct: 106 IRKSGTANIFIKNLDKSIDNKALHDTFAAFGNILSCKVATDASGQSKGYGFVQFEQEESA 165
Query: 321 TRAVNDMNAKMVGAK 365
A+ +N ++ K
Sbjct: 166 QNAIEKVNGMLLNDK 180
>tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota
PE=2 SV=1
Length = 658
Score = 128 bits (322), Expect = 1e-28
Identities = 66/142 (46%), Positives = 91/142 (64%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K F++KEWYVG A KKSERE +L +R+EQ KE+++ G LY+KN+D+ I KLKEL
Sbjct: 282 KKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEKLKEL 341
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXX 398
S Y T++SC++M+ P G S SGF +F TP+EA+RA+ +MN KM+ +KPL +
Sbjct: 342 FSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRKE 401
Query: 399 XXXXXLHAPFDHLLTSAMNAPP 464
L A F + AM PP
Sbjct: 402 ERRARLQAQFSQMRPVAM--PP 421
Score = 54.3 bits (129), Expect = 3e-06
Identities = 29/101 (28%), Positives = 55/101 (54%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ YVG +K +R++ ++ K K N +Y+KN+ + + L++
Sbjct: 194 NDKQVYVGVFLRKQDRDS-------EMSKTKFNN-----IYVKNLSDSTSEDDLRKTFGE 241
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAK 350
Y T++S +M+ G+S GF +F P++A +AV+ +N K
Sbjct: 242 YGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDALNGK 282
Score = 42.0 bits (97), Expect = 0.015
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 165 LYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMN 344
+++KN+D I L E S + T+ SC+I GQS GF + + + A A++ +N
Sbjct: 130 IFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLN 189
Query: 345 AKMVGAK 365
++ K
Sbjct: 190 GMLMNDK 196
>tr|A7QRL0|A7QRL0_VITVI Chromosome undetermined scaffold_151, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00005400001 PE=4 SV=1
Length = 659
Score = 127 bits (318), Expect = 4e-28
Identities = 64/138 (46%), Positives = 86/138 (62%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
++K WYVG A +KSEREA+L A++EQ +K K E G LYLKN+D+ + KLKEL S
Sbjct: 285 DDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKLKELFSE 344
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXXXXX 407
+ T++SC++M P G S SGF +FLTP+EATRA+N MN KM+G KPL +
Sbjct: 345 FGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERK 404
Query: 408 XXLHAPFDHLLTSAMNAP 461
L A F + + P
Sbjct: 405 ARLQAQFAQIRSPGAMTP 422
Score = 43.1 bits (100), Expect = 0.007
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
I S A +++KN+D I + L + + + TV SC+I +GQS GF F + A
Sbjct: 121 IRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAA 180
Query: 321 TRAVNDMNAKMVGAK 365
A+ +N ++ K
Sbjct: 181 QNAIKRLNGMLINDK 195
Score = 33.5 bits (75), Expect = 5.4
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 159 AYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQ-SMDSGFDSFLTPQEATRAVN 335
A LY+ ++D I +L +L V S + + + S+ + +F +PQ+AT A+
Sbjct: 39 ASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALE 98
Query: 336 DMNAKMVGAKPLSL 377
+N + KP+ +
Sbjct: 99 HLNFTPLNGKPIRI 112
>tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 408
Score = 126 bits (316), Expect = 6e-28
Identities = 66/143 (46%), Positives = 91/143 (63%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K F++KEW+VG A KK ERE +L R+EQ KE + GA LY+KN+D+ I K+KEL
Sbjct: 32 KKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKIKEL 91
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXX 398
SP+ T++SC++M+ P+G S SGF +F TP+EA+RA+ +MN KMV +KPL +
Sbjct: 92 FSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVALAQRKE 151
Query: 399 XXXXXLHAPFDHLLTSAMNAPPV 467
L A F + AM AP V
Sbjct: 152 DRRARLQAQFSQMRPVAM-APSV 173
>tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019539001
PE=4 SV=1
Length = 654
Score = 125 bits (313), Expect = 1e-27
Identities = 65/143 (45%), Positives = 92/143 (64%)
Frame = +3
Query: 39 KWFNEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKEL 218
K F++KEWYVG A KK+ERE +L R+EQ KE ++ G LY+KN+D+ I +KL+EL
Sbjct: 274 KKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLDDSIADDKLREL 333
Query: 219 LSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAKMVGAKPLSLXXXXXXX 398
S + T++SC++M+ P+G S SGF +F T +EA+RA+ DMN KMV +KPL +
Sbjct: 334 FSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMVASKPLYVALAQRKE 393
Query: 399 XXXXXLHAPFDHLLTSAMNAPPV 467
L A F + +AM AP V
Sbjct: 394 DRRARLQAQFSQMRPAAM-APSV 415
Score = 49.7 bits (117), Expect = 7e-05
Identities = 31/101 (30%), Positives = 48/101 (47%)
Frame = +3
Query: 48 NEKEWYVGPAPKKSEREADL*ARYEQLQKEKIENSHGAYLYLKNIDNEIKHNKLKELLSP 227
N+K+ YVGP +K ERE+ K K N +Y+KN+ LK +
Sbjct: 186 NDKQVYVGPFVRKQERES-------ATNKTKFNN-----VYVKNLLESTTDEDLKNIFGE 233
Query: 228 YRTVSSCEIMKTPHGQSMDSGFDSFLTPQEATRAVNDMNAK 350
Y ++S +M+ G+S GF +F +A R+V +N K
Sbjct: 234 YGPITSAVVMQDGDGKSKCFGFVNFENADDAARSVEALNGK 274
Score = 42.4 bits (98), Expect = 0.012
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 141 IENSHGAYLYLKNIDNEIKHNKLKELLSPYRTVSSCEIMKTPHGQSMDSGFDSFLTPQEA 320
I S A +++KN+D I + L + S + + SC+I GQS GF F + A
Sbjct: 114 IRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESA 173
Query: 321 TRAVNDMNAKMVGAK 365
A + +N ++ K
Sbjct: 174 KNATDKLNGMLLNDK 188
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