DK960255 |
Clone id |
TST39A01NGRL0006_O17 |
Library |
TST39 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_O17. 5' end sequence. |
Accession |
DK960255 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1596Contig1 |
Sequence |
CCTATAGGGAGGTGTGATGGATTGCTGGAAATTCTTCTACTAAGATGCTGATGGAGGCCT TGCATGCAGTCCCTTATTCTTGCTGCGGCTTCAACCCTCTACGCGGAGTATCATTTTCAG CATCATCATCATCATCGGCTCGCCCTCTCGCAGCTCCTCCCTCACCATTGTTCTCTCCAT TGACTAATTCTGGAAGGGGAAGGCGCAGAAGATCCATTTCCATGGATTCGGCTCGAGCCT CAATCGGGCTTCTAGAAACCTTACAAAGCCAGATTAACACAGAGGGTGTGAAAGTTGAGG AAGGGAAAGGGGGTCTTCCTAAATTAGTTTTGACAGAATCATCTGGCAGTCAGGCAGAGA TCTATGTATTTGGAGCATGTGTTACATCTTGGCGGCTTTCAAGTGGAAAAGACCTGCTGT TCGTTCGGCCTGACGCACTTTTCAACGGGCAAAAACCCATTAGTGGAGGAATTCCACACT GTTTTCCACAGTTTGGACCAGGGCCTATTCAACAGCATGGTTTTGCCCGCAATCTTCCGT GGTCTATAAGCAATTGTGAGAATGACAGGGGGAAGTCCATCTGTGGTCTTTGAACTCAAG GATAACAAGTATACACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40784 |
Definition |
sp|Q40784|AAPC_CENCI Putative apospory-associated protein C OS=Cenchrus ciliaris |
Align length |
81 |
Score (bit) |
83.6 |
E-value |
8.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NZI3 |
Definition |
tr|A9NZI3|A9NZI3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
107 |
Score (bit) |
147.0 |
E-value |
6.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960255|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_O17, 5' (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NZI3|A9NZI3_PICSI Putative uncharacterized protein OS=Picea... 147 6e-36 tr|A7PUT1|A7PUT1_VITVI Chromosome chr4 scaffold_32, whole genome... 152 2e-35 tr|Q6K2P3|Q6K2P3_ORYSJ Os09g0327400 protein OS=Oryza sativa subs... 144 2e-33 tr|B7FK87|B7FK87_MEDTR Putative uncharacterized protein OS=Medic... 144 3e-33 tr|B8A1H0|B8A1H0_MAIZE Putative uncharacterized protein OS=Zea m... 140 8e-33 tr|A9U353|A9U353_PHYPA Predicted protein OS=Physcomitrella paten... 138 3e-31 tr|Q9FJY6|Q9FJY6_ARATH Apospory-associated protein C-like OS=Ara... 137 4e-31 tr|A3BXI4|A3BXI4_ORYSJ Putative uncharacterized protein OS=Oryza... 135 5e-31 tr|A2YZX3|A2YZX3_ORYSI Putative uncharacterized protein OS=Oryza... 135 5e-31 tr|A9RQG4|A9RQG4_PHYPA Predicted protein OS=Physcomitrella paten... 137 7e-31 tr|Q9M6D7|Q9M6D7_CHLRE Apospory-associated protein C OS=Chlamydo... 123 8e-27 tr|A8J3Q5|A8J3Q5_CHLRE Predicted protein OS=Chlamydomonas reinha... 123 8e-27 tr|Q1WLY4|Q1WLY4_CHLIN Apospory-associated protein C (Fragment) ... 122 1e-26 tr|B4FX85|B4FX85_MAIZE Putative uncharacterized protein OS=Zea m... 117 5e-25 tr|Q01BE8|Q01BE8_OSTTA Apospory-associated protein C; APOC (ISS)... 112 1e-23 tr|A4RVK9|A4RVK9_OSTLU Predicted protein OS=Ostreococcus lucimar... 107 6e-22 tr|A4RRV8|A4RRV8_OSTLU Predicted protein OS=Ostreococcus lucimar... 104 5e-21 tr|B8BQI4|B8BQI4_THAPS Aldose-1-epimerase (Fragment) OS=Thalassi... 94 8e-18 tr|B7FQX6|B7FQX6_PHATR Predicted protein OS=Phaeodactylum tricor... 93 1e-17 tr|A7Q6C4|A7Q6C4_VITVI Chromosome chr11 scaffold_56, whole genom... 91 4e-17 tr|Q8S3Q3|Q8S3Q3_ORYSJ Os04g0658000 protein OS=Oryza sativa subs... 87 8e-16 tr|Q01HY8|Q01HY8_ORYSA OSIGBa0132E09-OSIGBa0108L24.1 protein OS=... 87 8e-16 tr|A2XYH1|A2XYH1_ORYSI Putative uncharacterized protein OS=Oryza... 87 8e-16 tr|B6T6S5|B6T6S5_MAIZE Apospory-associated protein C OS=Zea mays... 86 1e-15 tr|Q9LVC5|Q9LVC5_ARATH Apospory-associated protein C (Putative u... 86 2e-15 tr|B8A312|B8A312_MAIZE Putative uncharacterized protein OS=Zea m... 85 3e-15 tr|B6TB26|B6TB26_MAIZE Apospory-associated protein C OS=Zea mays... 85 3e-15 tr|B4FQ84|B4FQ84_MAIZE Putative uncharacterized protein OS=Zea m... 85 3e-15 tr|A9TTU2|A9TTU2_PHYPA Predicted protein OS=Physcomitrella paten... 84 5e-15 tr|Q6Z3M0|Q6Z3M0_ORYSJ cDNA, clone: J065013I20, full insert sequ... 84 9e-15
>tr|A9NZI3|A9NZI3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 359
Score = 147 bits (372), Expect(2) = 6e-36 Identities = 66/107 (61%), Positives = 80/107 (74%) Frame = +3
Query: 255 ETLQSQINTXXXXXXXXXXXLPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPD 434 E L +I LPKLVL + GS+AEIY+FG C++SW++ +GKDLLFVRPD Sbjct: 77 EKLNQEIGCLGVKVEEGEGKLPKLVLKSNGGSEAEIYLFGGCISSWKIPNGKDLLFVRPD 136
Query: 435 ALFNGQKPISGGIPHCFPQFGPGPIQQHGFARNLPWSISNCENDRGK 575 A+FNGQKPISGGIPHCFPQFGPG IQQHGFARN+ WS+++ N GK Sbjct: 137 AVFNGQKPISGGIPHCFPQFGPGLIQQHGFARNMTWSVASSGNSEGK 183
Score = 27.3 bits (59), Expect(2) = 6e-36 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +1
Query: 571 GSPSVVFELKDNKYT 615 G PSV ELKDN YT Sbjct: 182 GKPSVTLELKDNSYT 196
>tr|A7PUT1|A7PUT1_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024909001 PE=4 SV=1 Length = 278
Score = 152 bits (383), Expect = 2e-35 Identities = 68/92 (73%), Positives = 78/92 (84%) Frame = +3
Query: 315 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQF 494 LPKLVLT + GS+AEIY+FG CVTSW+ +SGKDLLFVRPDA+FNGQKPISGGIPHCFPQF Sbjct: 16 LPKLVLTSTHGSEAEIYLFGGCVTSWKAASGKDLLFVRPDAVFNGQKPISGGIPHCFPQF 75
Query: 495 GPGPIQQHGFARNLPWSISNCENDRGKSICGL 590 GPGP+QQHGFARN+ WS + EN G + L Sbjct: 76 GPGPMQQHGFARNMNWSAVDSENVEGNPVVTL 107
>tr|Q6K2P3|Q6K2P3_ORYSJ Os09g0327400 protein OS=Oryza sativa subsp. japonica GN=P0706E03.9 PE=2 SV=1 Length = 319
Score = 144 bits (363), Expect(2) = 2e-33 Identities = 64/86 (74%), Positives = 75/86 (87%) Frame = +3
Query: 315 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQF 494 LPK+ L GS+AEIY+FGACVTSW++ SGKDLLFVRPDA+FNGQKPISGGIPHCFPQF Sbjct: 57 LPKIDLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGGIPHCFPQF 116
Query: 495 GPGPIQQHGFARNLPWSISNCENDRG 572 GPG +QQHGFARN+ WSI++ E + G Sbjct: 117 GPGTMQQHGFARNMNWSITDSEANEG 142
Score = 22.7 bits (47), Expect(2) = 2e-33 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +1
Query: 571 GSPSVVFELKDNKYT 615 G P+V ELKD+ Y+ Sbjct: 142 GDPAVTLELKDDSYS 156
>tr|B7FK87|B7FK87_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 255
Score = 144 bits (364), Expect(2) = 3e-33 Identities = 63/92 (68%), Positives = 76/92 (82%) Frame = +3
Query: 315 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQF 494 LPKLVLT +GS+AEIY+FG C+TSW++ +GKDLLFVRPDA+FN +KPI GGIPHCFPQF Sbjct: 50 LPKLVLTSPAGSEAEIYLFGGCITSWKVPNGKDLLFVRPDAVFNKKKPIGGGIPHCFPQF 109
Query: 495 GPGPIQQHGFARNLPWSISNCENDRGKSICGL 590 GPG IQQHGFARNL W++ + EN G + L Sbjct: 110 GPGTIQQHGFARNLDWTVGDSENVEGNPVVTL 141
Score = 21.6 bits (44), Expect(2) = 3e-33 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +1
Query: 571 GSPSVVFELKDNKYT 615 G+P V ELKD+ Y+ Sbjct: 135 GNPVVTLELKDDTYS 149
>tr|B8A1H0|B8A1H0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 140 bits (354), Expect(2) = 8e-33 Identities = 63/86 (73%), Positives = 75/86 (87%) Frame = +3
Query: 315 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQF 494 LPK+ L GS+AEIY+FGACVTS+++ +GKDLLFVRPDA+FNGQKPISGGIPHCFPQF Sbjct: 53 LPKIDLKSPHGSEAEIYLFGACVTSFKVPNGKDLLFVRPDAVFNGQKPISGGIPHCFPQF 112
Query: 495 GPGPIQQHGFARNLPWSISNCENDRG 572 GPGP+QQHGFARN+ WSI++ E G Sbjct: 113 GPGPMQQHGFARNVNWSITDSEVTEG 138
Score = 23.9 bits (50), Expect(2) = 8e-33 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1
Query: 562 MTGGSPSVVFELKDNKYT 615 +T G P+V ELKD+ Y+ Sbjct: 135 VTEGDPAVTLELKDDTYS 152
>tr|A9U353|A9U353_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155277 PE=4 SV=1 Length = 315
Score = 138 bits (347), Expect = 3e-31 Identities = 61/106 (57%), Positives = 77/106 (72%) Frame = +3
Query: 255 ETLQSQINTXXXXXXXXXXXLPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPD 434 E L + T L K+VL+ GS+AE+Y++G CVTSW+ + GKDLLFVRPD Sbjct: 33 ENLNEKYGTEGVKVQSGEGGLTKVVLSGRDGSEAEVYLYGGCVTSWKAAGGKDLLFVRPD 92
Query: 435 ALFNGQKPISGGIPHCFPQFGPGPIQQHGFARNLPWSISNCENDRG 572 A+F G+KPISGG+PHCFPQFGPG IQQHGFARN+ W I++ +ND G Sbjct: 93 AVFTGKKPISGGLPHCFPQFGPGVIQQHGFARNVTWDIASTQNDGG 138
>tr|Q9FJY6|Q9FJY6_ARATH Apospory-associated protein C-like OS=Arabidopsis thaliana GN=At5g66530 PE=1 SV=1 Length = 307
Score = 137 bits (346), Expect = 4e-31 Identities = 60/83 (72%), Positives = 71/83 (85%) Frame = +3
Query: 315 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQF 494 LPKLVLT S+AEIY+FG C+TSW+++SGKDLLFVRPDA+FN KPISGGIPHCFPQF Sbjct: 45 LPKLVLTSPQNSEAEIYLFGGCITSWKVASGKDLLFVRPDAVFNKIKPISGGIPHCFPQF 104
Query: 495 GPGPIQQHGFARNLPWSISNCEN 563 GPG IQQHGF RN+ WS+ + +N Sbjct: 105 GPGLIQQHGFGRNMDWSVVDSQN 127
>tr|A3BXI4|A3BXI4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027756 PE=4 SV=1 Length = 360
Score = 135 bits (341), Expect(2) = 5e-31 Identities = 59/75 (78%), Positives = 69/75 (92%) Frame = +3
Query: 348 SQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQFGPGPIQQHGFA 527 S+AEIY+FGACVTSW++ SGKDLLFVRPDA+FNGQKPISGGIPHCFPQFGPG +QQHGFA Sbjct: 109 SEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGGIPHCFPQFGPGTMQQHGFA 168
Query: 528 RNLPWSISNCENDRG 572 RN+ WSI++ E + G Sbjct: 169 RNMNWSITDSEANEG 183
Score = 22.7 bits (47), Expect(2) = 5e-31 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +1
Query: 571 GSPSVVFELKDNKYT 615 G P+V ELKD+ Y+ Sbjct: 183 GDPAVTLELKDDSYS 197
>tr|A2YZX3|A2YZX3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30908 PE=4 SV=1 Length = 360
Score = 135 bits (341), Expect(2) = 5e-31 Identities = 59/75 (78%), Positives = 69/75 (92%) Frame = +3
Query: 348 SQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQFGPGPIQQHGFA 527 S+AEIY+FGACVTSW++ SGKDLLFVRPDA+FNGQKPISGGIPHCFPQFGPG +QQHGFA Sbjct: 109 SEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGGIPHCFPQFGPGTMQQHGFA 168
Query: 528 RNLPWSISNCENDRG 572 RN+ WSI++ E + G Sbjct: 169 RNMNWSITDSEANEG 183
Score = 22.7 bits (47), Expect(2) = 5e-31 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +1
Query: 571 GSPSVVFELKDNKYT 615 G P+V ELKD+ Y+ Sbjct: 183 GDPAVTLELKDDSYS 197
>tr|A9RQG4|A9RQG4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204738 PE=4 SV=1 Length = 365
Score = 137 bits (344), Expect = 7e-31 Identities = 60/85 (70%), Positives = 73/85 (85%), Gaps = 1/85 (1%) Frame = +3
Query: 315 LPKLVLTESSGS-QAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGIPHCFPQ 491 L K+VL+ GS +A++Y+FGAC+TSW+ S GKDLLFVRPDA+F GQKPISGGIPHCFPQ Sbjct: 101 LTKVVLSSPDGSNEAQVYLFGACITSWKTSDGKDLLFVRPDAIFTGQKPISGGIPHCFPQ 160
Query: 492 FGPGPIQQHGFARNLPWSISNCEND 566 FGPGPIQQHGFARN+ W I + ++D Sbjct: 161 FGPGPIQQHGFARNMLWVIESAQSD 185
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