DK960281
Clone id TST39A01NGRL0006_P20
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_P20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTCGTTCTAGCGCACCTGATCGCCTACGAGCTGTGCGAGGAGTGCGCTTGATTGCAGCG
ATGAAGGTAGTCGCGGCTTACCTGCTGGCGCTGCTGGGGGGCAACTGCTCGCCTTCCGCT
GCCGACATCAAGAATATTCTTGGCTCAGTTGGTTCTGAAGCTGACGATGACAGGATAGAC
TTGCTACTGAGCGAGTTGAAAGGCAAGGACATTGTGGAGCTCATTGCTGCCGGAAAGGAG
AAGCTTGCTTCTGTCCCTGCAGGTGGAGGTGGTGGCGTTGTGGTCAGTGCAGGAGGTGGT
GGTGGTGCAGGTCCTGCCGCAGCAGTTGAGGAGAAAAAGGAGGAGAAAGAGGAAAAGAAG
GAGCCCGAGGAGGAGTCCGATGATGACATGGGATTCAGTCTGTTTGACTAAGGTTTTTGC
AAAGGGAGGCAGTGAACCGATTTTGTAATGCCCTTTCTTTAGATGTAATAGAAGTATATT
TTCAGATGGCCAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P41099
Definition sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium argentatum
Align length 50
Score (bit) 72.8
E-value 8.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960281|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_P20, 5'
(495 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Partheni... 73 8e-13
sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternar... 73 8e-13
sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabi... 71 3e-12
sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2 OS=Branchio... 70 5e-12
sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1 OS=Arabi... 69 9e-12
sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium... 69 1e-11
sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea ma... 69 2e-11
sp|Q9C3Z5|RLA2_PODAN 60S acidic ribosomal protein P2 OS=Podospor... 67 6e-11
sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4 OS=Arabi... 66 8e-11
sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus ca... 65 2e-10
sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha OS=Sc... 64 3e-10
sp|P42039|RLA2_CLAHE 60S acidic ribosomal protein P2 OS=Cladospo... 64 3e-10
sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea ma... 64 4e-10
sp|P99027|RLA2_MOUSE 60S acidic ribosomal protein P2 OS=Mus musc... 64 5e-10
sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sap... 63 7e-10
sp|P42899|RLA2_BOVIN 60S acidic ribosomal protein P2 OS=Bos taur... 63 9e-10
sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta OS=Sch... 62 1e-09
sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C OS=Schizo... 62 1e-09
sp|P02401|RLA2_RAT 60S acidic ribosomal protein P2 OS=Rattus nor... 61 3e-09
sp|Q9UUZ6|RLA2_ASPFU 60S acidic ribosomal protein P2 OS=Aspergil... 60 7e-09
sp|Q9LH85|RLA23_ARATH 60S acidic ribosomal protein P2-3 OS=Arabi... 60 7e-09
sp|Q9HFQ4|RLA4_CANAL 60S acidic ribosomal protein P2-B OS=Candid... 59 1e-08
sp|Q29315|RLA2_PIG 60S acidic ribosomal protein P2 OS=Sus scrofa... 59 2e-08
sp|Q9LUK2|RLA25_ARATH 60S acidic ribosomal protein P2-5 OS=Arabi... 58 3e-08
sp|Q9GPU2|RLA2_EUPRA 60S acidic ribosomal protein P2 OS=Euplotes... 57 5e-08
sp|Q96UQ7|RLA2_RHOGU 60S acidic ribosomal protein P2 OS=Rhodotor... 56 8e-08
sp|P02400|RLA4_YEAST 60S acidic ribosomal protein P2-beta OS=Sac... 54 3e-07
sp|O61463|RLA2_CRYST 60S acidic ribosomal protein P2 OS=Cryptoch... 54 4e-07
sp|Q9HFQ5|RLA2_CANAL 60S acidic ribosomal protein P2-A OS=Candid... 53 7e-07
sp|P02399|RLA2_ARTSA 60S acidic ribosomal protein P2 OS=Artemia ... 52 1e-06

>sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium
argentatum PE=3 SV=1
Length = 114

Score = 72.8 bits (177), Expect = 8e-13
Identities = 33/50 (66%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SP+ D+K+IL SVG++ADDD+I+LLLS++KGKDI ELIA+G+E+L
Sbjct: 13 GGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL 62


>sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria
alternata GN=ALTA5 PE=1 SV=1
Length = 113

Score = 72.8 bits (177), Expect = 8e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SPSAAD+K +L SVG EAD DR+D L+SEL+GKDI ELIA+G EKL
Sbjct: 13 GGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKL 62


>sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2
OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1
Length = 115

Score = 70.9 bits (172), Expect = 3e-12
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = +1

Query: 100 GNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
G SP++ADIK ILGSVG+E +D +I+LLL E+KGKD+ ELIAAG+EKL
Sbjct: 14 GKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62


>sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2
OS=Branchiostoma floridae PE=3 SV=1
Length = 116

Score = 70.1 bits (170), Expect = 5e-12
Identities = 40/104 (38%), Positives = 51/104 (49%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKLXXXXXXXXXX 276
GGN +PSA DIK ILGSVG +A+D+R++ ++ ELKGKDI E++AAG+ KL
Sbjct: 13 GGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKLSSMPSGGGVA 72

Query: 277 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 408
DDDMGF LFD
Sbjct: 73 AAAGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116


>sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1
OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2
Length = 115

Score = 69.3 bits (168), Expect = 9e-12
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +1

Query: 100 GNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
G SP+ DIK+ILGSVG+E +D +I+LLL E+KGKD+ ELIAAG+EKL
Sbjct: 14 GKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62


>sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium
culmorum PE=1 SV=1
Length = 109

Score = 68.9 bits (167), Expect = 1e-11
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SPSAAD+K +L SVG +AD+DR++ L+SEL+GKDI +LIA G EKL
Sbjct: 13 GGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSEKL 62


>sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays
GN=RPP2B PE=1 SV=1
Length = 113

Score = 68.6 bits (166), Expect = 2e-11
Identities = 31/50 (62%), Positives = 44/50 (88%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SP+A D+K+IL SVG+EAD+++++ LL+ELK KDI E+IAAG+E+L
Sbjct: 13 GGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERL 62


>sp|Q9C3Z5|RLA2_PODAN 60S acidic ribosomal protein P2 OS=Podospora
anserina PE=3 SV=1
Length = 111

Score = 66.6 bits (161), Expect = 6e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GG +PSAAD+K +L SVG EAD DR+D L+SEL+GKD+ ELIA G KL
Sbjct: 13 GGKATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSSKL 62


>sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4
OS=Arabidopsis thaliana GN=RPP2D PE=2 SV=1
Length = 111

Score = 66.2 bits (160), Expect = 8e-11
Identities = 30/50 (60%), Positives = 42/50 (84%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN +PSA +IK+I+G+VG++ D + I+LLL E+ GKDI ELIA+G+EKL
Sbjct: 13 GGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62


>sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus
caballus GN=RPLP2 PE=3 SV=1
Length = 115

Score = 65.1 bits (157), Expect = 2e-10
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SPSA DIK IL SVG EADDDR+D ++SEL GK+I ++IA G KL
Sbjct: 13 GGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIGKL 62


tr_hit_id Q3HVP0
Definition tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein OS=Solanum tuberosum
Align length 50
Score (bit) 82.4
E-value 1.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960281|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_P20, 5'
(495 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein... 82 1e-14
tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome... 81 3e-14
tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromos... 80 5e-14
tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus du... 80 7e-14
tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Popul... 79 1e-13
tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglan... 78 2e-13
tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genom... 77 3e-13
tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Popul... 77 5e-13
tr|A9P894|A9P894_POPTR Putative uncharacterized protein OS=Popul... 77 5e-13
tr|Q7XYD5|Q7XYD5_WHEAT Acidic ribosomal protein (Fragment) OS=Tr... 75 1e-12
tr|Q5YJR8|Q5YJR8_HYAOR 60S acidic ribosomal protein OS=Hyacinthu... 75 2e-12
tr|Q677G0|Q677G0_HYAOR Acidic ribosomal protein OS=Hyacinthus or... 74 4e-12
tr|Q65WT5|Q65WT5_ORYSJ Os05g0445500 protein OS=Oryza sativa subs... 74 5e-12
tr|Q38M67|Q38M67_SOLTU Putative uncharacterized protein OS=Solan... 74 5e-12
tr|B8AYR2|B8AYR2_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12
tr|A5BNT4|A5BNT4_VITVI Putative uncharacterized protein OS=Vitis... 74 5e-12
tr|A3B4J3|A3B4J3_ORYSJ Putative uncharacterized protein OS=Oryza... 74 5e-12
tr|A9NPB9|A9NPB9_PICSI Putative uncharacterized protein OS=Picea... 73 7e-12
tr|B2WCX9|B2WCX9_PYRTR 60S acidic ribosomal protein P2 OS=Pyreno... 73 9e-12
tr|A9U0Z9|A9U0Z9_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11
tr|A9NWC8|A9NWC8_PICSI Putative uncharacterized protein OS=Picea... 72 1e-11
tr|A9RPY2|A9RPY2_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11
tr|A9RKJ0|A9RKJ0_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11
tr|A7QN01|A7QN01_VITVI Chromosome undetermined scaffold_129, who... 72 1e-11
tr|B7FMX7|B7FMX7_MEDTR Putative uncharacterized protein OS=Medic... 71 2e-11
tr|B6DRE4|B6DRE4_9LAMI 60S acidic ribosomal protein P2-like prot... 71 3e-11
tr|A9S6G5|A9S6G5_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11
tr|Q2H653|Q2H653_CHAGB Putative uncharacterized protein OS=Chaet... 71 3e-11
tr|B8P0N4|B8P0N4_9APHY 60S acidic ribosomal protein P2 OS=Postia... 71 3e-11
tr|A9RV72|A9RV72_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11

>tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein
OS=Solanum tuberosum PE=4 SV=1
Length = 115

Score = 82.4 bits (202), Expect = 1e-14
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SPSAAD+K IL SVG+EADDDRI+LLLS++KGKDI ELIAAG+EKL
Sbjct: 13 GGNTSPSAADLKKILASVGAEADDDRIELLLSQVKGKDITELIAAGREKL 62


>tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021645001
PE=4 SV=1
Length = 114

Score = 80.9 bits (198), Expect = 3e-14
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN PSA D+K+ILGSVG+EADDDRI+LLLSE+KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGREKL 62


>tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromosome
chr6 scaffold_25, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00022049001 PE=4 SV=1
Length = 113

Score = 80.1 bits (196), Expect = 5e-14
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN PSA D+K+ILGSVG+EADDDRI+LLL+E+KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGREKL 62


>tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus
dulcis GN=AL60SRP PE=4 SV=1
Length = 113

Score = 79.7 bits (195), Expect = 7e-14
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN +PSA D+K+ILGSVG+E DDDRI LLLSE+KGKDI ELIA+G+EKL
Sbjct: 13 GGNTTPSAEDLKDILGSVGAETDDDRIQLLLSEVKGKDITELIASGREKL 62


>tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 113

Score = 79.0 bits (193), Expect = 1e-13
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN P+A D+KNILGSVG++ADDDRI+LLLS +KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGREKL 62


>tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglans
regia PE=4 SV=1
Length = 113

Score = 78.2 bits (191), Expect = 2e-13
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN +P D+K+ILGSVG+EADDD+I+LLLSE+KGKDI ELIAAG+EKL
Sbjct: 13 GGNTTPCTDDLKHILGSVGAEADDDKIELLLSEVKGKDITELIAAGREKL 62


>tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034930001
PE=4 SV=1
Length = 111

Score = 77.4 bits (189), Expect = 3e-13
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN SP A D+K+ILGSVG+EADDD I+LLLSE+KGKDI ELIA+G+EKL
Sbjct: 13 GGNGSPCADDLKSILGSVGAEADDDGIELLLSEVKGKDITELIASGREKL 62


>tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 114

Score = 77.0 bits (188), Expect = 5e-13
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN P+A D+K+ILGSVG++ADDDRI+LLLS +KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKL 62


>tr|A9P894|A9P894_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 114

Score = 77.0 bits (188), Expect = 5e-13
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEKL 246
GGN P+A D+K+ILGSVG++ADDDRI+LLLS +KGKDI ELIA+G+EKL
Sbjct: 13 GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKL 62


>tr|Q7XYD5|Q7XYD5_WHEAT Acidic ribosomal protein (Fragment)
OS=Triticum aestivum PE=2 SV=1
Length = 138

Score = 75.5 bits (184), Expect = 1e-12
Identities = 34/49 (69%), Positives = 45/49 (91%)
Frame = +1

Query: 97 GGNCSPSAADIKNILGSVGSEADDDRIDLLLSELKGKDIVELIAAGKEK 243
GGN SPSAAD+KNIL SVG+EAD+++++ LL+ELKGKDI E+IA+G+EK
Sbjct: 38 GGNSSPSAADVKNILDSVGAEADEEKLEFLLAELKGKDITEVIASGREK 86