DK960298
Clone id TST39A01NGRL0007_A16
Library
Length 636
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_A16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTAATTGAGAAGCTGGGAGGTCAAGTTCTTGGTGGAAAGCGAGTGCAGAGCGTTTTGTGC
AACAGCGAGTCGAAGGTTTCTTCTGTTCTTGCAAGTAATTTCTTAGAAGTCTTTTACATG
TAGGTTACGGTTGTTCCATATGTAGCTGTATGTGGTAGTGAAATTGAAATTTTGATTGTG
TAAGCTTTTGCACATTTTTTTTGGTGTTGACCTGCTGAGTATGTAAGTCAGATGCCTGTC
ACCAGATTTCATAGATATTGAAGATCTAAGAAGTTACACAAACCACAGATTGAAGTTTGA
GGAGAAAGAAGCTATCAGTTAAGTCACAAGCAAACTCTGTTTTGGGGCCTGTTGGGTCAA
AAACTCCATTTCCAACATCCTCTGTTTCTCGTCTCCTTCTGGCCGTTTCTTTTGGAAGTT
CTGTCGATTGTATACAGTATATATTTGTAAAATGCCGTTTGTAATCTGTTCACTCGAAAA
GAGCCAGCCGTCTCTGTCTTAGTGGCCTTATCGGGCTCGTTGTGTCCCTTCCATCTGACT
ATGAGCTCAGGGTCACAGGGTATAAGATGGGATTGGCTTTGGAGTAAGATGGGCCGAAAT
ATCCAACTTTATGGTGCTAGACTATTATAGAGGCTG
■■Homology search results ■■ -
sp_hit_id Q92JF7
Definition sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Rickettsia conorii
Align length 114
Score (bit) 32.7
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960298|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_A16, 5'
(636 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Ricke... 33 1.6

>sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Rickettsia
conorii GN=sca2 PE=3 SV=1
Length = 1795

Score = 32.7 bits (73), Expect = 1.6
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Frame = -3

Query: 469 TDYKRHFTNIYCIQSTELPKETARRRRETEDVGNGVFDPTGPKTEFACDL---------- 320
T+ ++ NIY Q T+ P+E + T + D GP+TE ++
Sbjct: 1248 TELEQKIHNIYIQQLTKYPEEEVKEAFNTASL-----DFIGPRTEIGQEVHNIYKSQLLE 1302

Query: 319 --TDSFFLLKLQSVVCVTS*IFNIYEIW*QASDLHTQQVNTKKNVQKLTQSKFQ 164
D+ L Q V+ + + Y SD+ ++ N +K V++L Q K Q
Sbjct: 1303 LTKDTELCLFTQQVLAEATELEQKY-----GSDIQSENSNNEKKVERLDQEKLQ 1351


tr_hit_id Q7S0X8
Definition tr|Q7S0X8|Q7S0X8_NEUCR Putative uncharacterized protein OS=Neurospora crassa
Align length 86
Score (bit) 39.3
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960298|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_A16, 5'
(636 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7S0X8|Q7S0X8_NEUCR Putative uncharacterized protein OS=Neuro... 39 0.20
tr|B4LV76|B4LV76_DROVI GJ17413 OS=Drosophila virilis GN=GJ17413 ... 37 1.00
tr|B3M376|B3M376_DROAN GF18544 OS=Drosophila ananassae GN=GF1854... 34 8.4

>tr|Q7S0X8|Q7S0X8_NEUCR Putative uncharacterized protein OS=Neurospora
crassa GN=NCU06946 PE=3 SV=2
Length = 1060

Score = 39.3 bits (90), Expect = 0.20
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Frame = +1

Query: 364 LHFQHPLFLVS-----FWPFLLEVLSIVYSIYL*NAVCNLFTRKEPA------VSVLVAL 510
LHF PLFL+S FW L L VY IY + ++ R+E A VS++V +
Sbjct: 911 LHFSAPLFLISMPVIPFWTAFLANLLYVYCIYGLASCMSMVVRREDAPLLATMVSLIVGI 970

Query: 511 SGSLCPFHLTMSSGSQGIRW--DWLW 582
P S + RW DWLW
Sbjct: 971 LSGAAP------SLREAKRWHLDWLW 990


>tr|B4LV76|B4LV76_DROVI GJ17413 OS=Drosophila virilis GN=GJ17413
PE=4 SV=1
Length = 270

Score = 37.0 bits (84), Expect = 1.00
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = -3

Query: 610 KVGYFGPSYSKANPILYPVTLSS*SDGRDTTSPIRPLRQRRLA---LFE*TDYKRHFTNI 440
+VG FG +Y + + Y V+ S G DT P++ L RR+ D R N+
Sbjct: 182 RVGNFGATYDYGSIMHYSVSAFKKSAGLDTIKPLQSLNGRRMGQRNRMSDADITR-LNNM 240

Query: 439 Y-CIQSTELPKETARRRRETED 377
Y C TE+P TA+ E D
Sbjct: 241 YKCNNQTEMPNVTAKAIEEKTD 262


>tr|B3M376|B3M376_DROAN GF18544 OS=Drosophila ananassae GN=GF18544
PE=4 SV=1
Length = 1227

Score = 33.9 bits (76), Expect = 8.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3

Query: 469 TDYKRHFTNIYCIQSTELPKETARRRRETEDVGNGVFDPTG 347
T+YKR+ IYC TE P +R E E + VF+ G
Sbjct: 746 TNYKRNVATIYCDDCTEQPTLASRAPGEPEPLSTAVFEARG 786