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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960301
Clone id TST39A01NGRL0007_A19
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_A19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTTCTTCAAGCACCTTCGCCG
GCCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGGTAGGCAATGTGGGCGAGG
CCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATGGCCCCG
ACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGGGAGAAT
TTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCTTCGCCA
AGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGGCTGCG
TGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGG
CTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCTCGTCC
ACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCATGGGCGCTGTTGAGG
GATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCATCTACC
■■Homology search results ■■ -
sp_hit_id P20866
Definition sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens
Align length 180
Score (bit) 307.0
E-value 3.0e-83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960301|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_A19, 5'
         (591 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   307   3e-83
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   307   3e-83
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   305   1e-82
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   303   3e-82
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   303   4e-82
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   303   6e-82
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   302   7e-82
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   302   7e-82
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   302   9e-82
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   301   1e-81
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   301   1e-81
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   301   2e-81
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   301   2e-81
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   300   3e-81
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   300   3e-81
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   299   6e-81
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   299   8e-81
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   299   8e-81
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   299   8e-81
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   299   8e-81
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   299   8e-81
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   298   1e-80
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   298   1e-80
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   298   1e-80
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   298   1e-80
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   297   3e-80
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   296   4e-80
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   296   5e-80
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   296   7e-80
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   295   2e-79

>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  307 bits (786), Expect = 3e-83
 Identities = 152/180 (84%), Positives = 166/180 (92%), Gaps = 3/180 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 230
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 231 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 410
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 411 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192



 Score = 30.8 bits (68), Expect = 5.3
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 240 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 389
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  307 bits (786), Expect = 3e-83
 Identities = 144/168 (85%), Positives = 156/168 (92%), Gaps = 4/168 (2%)
 Frame = +3

Query: 99  KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 266
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 267 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 446
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 447 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 186


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  305 bits (781), Expect = 1e-82
 Identities = 146/161 (90%), Positives = 152/161 (94%), Gaps = 2/161 (1%)
 Frame = +3

Query: 114 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 287
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 288 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 467
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 468 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+Y
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLY 189


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  303 bits (777), Expect = 3e-82
 Identities = 152/173 (87%), Positives = 155/173 (89%), Gaps = 1/173 (0%)
 Frame = +3

Query: 75  KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 251
           KP +ELS KVG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPGD
Sbjct: 18  KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 252 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 431
           YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 432 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 189


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  303 bits (776), Expect = 4e-82
 Identities = 143/164 (87%), Positives = 151/164 (92%), Gaps = 4/164 (2%)
 Frame = +3

Query: 111 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 278
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 279 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 458
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 459 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLY 191


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  303 bits (775), Expect = 6e-82
 Identities = 148/180 (82%), Positives = 159/180 (88%), Gaps = 3/180 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 230
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 231 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 410
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 411 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  302 bits (774), Expect = 7e-82
 Identities = 144/163 (88%), Positives = 152/163 (93%), Gaps = 4/163 (2%)
 Frame = +3

Query: 114 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 281
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 282 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 461
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 462 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+Y
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLY 191


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  302 bits (774), Expect = 7e-82
 Identities = 148/173 (85%), Positives = 156/173 (90%), Gaps = 4/173 (2%)
 Frame = +3

Query: 84  SELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 251
           S  SS+V   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEV--TGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 252 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 431
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 432 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+Y
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLY 190


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  302 bits (773), Expect = 9e-82
 Identities = 144/163 (88%), Positives = 151/163 (92%), Gaps = 4/163 (2%)
 Frame = +3

Query: 114 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 281
           G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 282 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 461
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 462 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+Y
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLY 191


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  301 bits (772), Expect = 1e-81
 Identities = 143/163 (87%), Positives = 151/163 (92%), Gaps = 4/163 (2%)
 Frame = +3

Query: 114 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 281
           G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 282 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 461
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 462 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 191
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 177
Score (bit) 318.0
E-value 1.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960301|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_A19, 5'
         (591 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   318   1e-85
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   314   3e-84
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   314   3e-84
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   313   4e-84
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   313   5e-84
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   313   6e-84
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   310   4e-83
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   310   4e-83
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   309   7e-83
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   308   2e-82
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   307   3e-82
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   307   3e-82
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   306   4e-82
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   306   4e-82
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   306   7e-82
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   306   7e-82
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   306   7e-82
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   305   1e-81
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   305   1e-81
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   304   2e-81
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   304   3e-81
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   304   3e-81
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   304   3e-81
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   304   3e-81
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   303   4e-81
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   303   5e-81
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   303   5e-81
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   303   6e-81
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   302   8e-81
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   302   8e-81

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  318 bits (815), Expect = 1e-85
 Identities = 155/177 (87%), Positives = 164/177 (92%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 239
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 240 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 419
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 420 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIY
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIY 189


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  314 bits (804), Expect = 3e-84
 Identities = 155/179 (86%), Positives = 165/179 (92%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIY
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIY 192


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  314 bits (804), Expect = 3e-84
 Identities = 155/179 (86%), Positives = 165/179 (92%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIY
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIY 192


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  313 bits (803), Expect = 4e-84
 Identities = 153/182 (84%), Positives = 164/182 (90%), Gaps = 5/182 (2%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 224
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 225 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 404
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 405 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 584
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 585 IY 590
           IY
Sbjct: 193 IY 194


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  313 bits (802), Expect = 5e-84
 Identities = 154/179 (86%), Positives = 165/179 (92%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 191


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  313 bits (801), Expect = 6e-84
 Identities = 153/179 (85%), Positives = 166/179 (92%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 191


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  310 bits (794), Expect = 4e-83
 Identities = 152/179 (84%), Positives = 165/179 (92%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIY 191


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  310 bits (794), Expect = 4e-83
 Identities = 154/179 (86%), Positives = 164/179 (91%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIY
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIY 191


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  309 bits (792), Expect = 7e-83
 Identities = 149/179 (83%), Positives = 167/179 (93%), Gaps = 2/179 (1%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 233
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 234 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 413
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 414 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 191


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  308 bits (788), Expect = 2e-82
 Identities = 152/177 (85%), Positives = 160/177 (90%)
 Frame = +3

Query: 60  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 239
           GQ++ KP +ELS KVG   EARVSMRK  S  SDS WYG DR K+LGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGT-SEARVSMRK--SSGSDSIWYGADRPKFLGPFSGETPSYLNGE 70

Query: 240 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 419
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 71  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 130

Query: 420 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 590
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIY
Sbjct: 131 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIY 187