DK960321
Clone id TST39A01NGRL0007_B16
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_B16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCTGCTGTGCGCCTTCGTGGAGCTTTAATGGAAGCTTTACCCGCAACCTTTCAGCATCCT
CCGTGATATGGGGCCTCCTCCTAACGCCTCAGAGTAGCTCATTTGTGCTGTGTTTTTCCA
AGCATACGTTCAAAGGGACACAGGCCATGGCTCCCTCCTTACCTCCTTGCATCGGCAATG
CCTTCTGCTCGCATAGGCAAGCATCCTGTGTTCTGCTGGTGACCCTCGTTCCCTTTTTCA
TCCCCTTCTTAATTCTCTGTGTGCCATTTTTGCTTCTCTTTCTTGCCCCATTGTCTTCCC
TGCTCCTCTCTCTTCTTCTGTTATACAAGGTGCAGGTTTCAATAAGCTCGAGACGACGCT
CATCCATTCTCAGCAAAGATGCTTCCGGGAAACTGACTGGATTGACTGAAGCTTCATCTA
TAGACAAGGAAGGAAGGAGGTGGCAGGTTTTGCCAGGGTCTGCTGAAGAGCTAGATGGTT
CAAATTTGCAGAGTACGGCTGTTTCTTCAGTACGAGATGGGGAAGATTCGCACCAGATGT
CATCAAGTGCTAGCAGTCTCATTGGGGAGGAGCCTGACGATGTCAAAGAGCTTGATGCAA
GAGATGAATTAGAGCAAAGGCATGCAG
■■Homology search results ■■ -
sp_hit_id A1WWU7
Definition sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira halophila (strain DSM 244 / SL1)
Align length 43
Score (bit) 32.7
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960321|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_B16, 5'
(627 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira halo... 33 1.6
sp|P35405|ADA2C_DIDMA Alpha-2C adrenergic receptor OS=Didelphis ... 32 2.0
sp|P0C230|PRT_OSITU Protamine OS=Osilinus turbinatus PE=1 SV=1 32 2.7
sp|A2AI05|NDOR1_MOUSE NADPH-dependent diflavin oxidoreductase 1 ... 32 3.5
sp|Q63755|PRDM2_RAT PR domain zinc finger protein 2 OS=Rattus no... 31 4.5
sp|Q535K8|GON4L_RAT GON-4-like protein OS=Rattus norvegicus GN=G... 31 4.5
sp|Q6P2W5|ARGL1_XENTR Arginine and glutamate-rich protein 1 OS=X... 31 4.5
sp|Q4KLS8|ARGL1_XENLA Arginine and glutamate-rich protein 1 OS=X... 31 4.5
sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helica... 31 5.9
sp|Q5KNY5|PPIL4_CRYNE Peptidyl-prolyl cis-trans isomerase-like 4... 31 5.9
sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 30 7.7
sp|P48820|RBP2_BOVIN E3 SUMO-protein ligase RanBP2 (Fragment) OS... 30 7.7
sp|Q04373|PUF6_YEAST Protein PUF6 OS=Saccharomyces cerevisiae GN... 30 7.7

>sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=serS PE=3 SV=1
Length = 425

Score = 32.7 bits (73), Expect = 1.6
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3

Query: 391 FPEASLLRMDERRLELI-ETCTLYNRRRERSREDNGARKRSKN 266
F A +D RR +L ET TL N+R ERS+E A+KR ++
Sbjct: 25 FDAAGYRALDARRRDLQQETQTLQNQRNERSKEIGAAKKRGED 67


>sp|P35405|ADA2C_DIDMA Alpha-2C adrenergic receptor OS=Didelphis
marsupialis virginiana GN=ADRA2C PE=2 SV=2
Length = 469

Score = 32.3 bits (72), Expect = 2.0
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3

Query: 352 LELIETCTLYNRRRERSREDNGARKRSK 269
+EL E+ T NRRR RSRE+ ARK S+
Sbjct: 304 IELEESSTSENRRRRRSREEAAARKGSR 331


>sp|P0C230|PRT_OSITU Protamine OS=Osilinus turbinatus PE=1 SV=1
Length = 106

Score = 32.0 bits (71), Expect = 2.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3

Query: 358 RRLELIETCTLYNRRRERSREDNGARKRS-KNGTQRIKKGMKKGTRVTSR 212
RR ++ RRR RSR+ G R+R K +R+K+ +KG R T R
Sbjct: 50 RRRSASRRRSVSRRRRRRSRKSRGRRRRGRKVRRRRVKRAGRKGRRRTRR 99


>sp|A2AI05|NDOR1_MOUSE NADPH-dependent diflavin oxidoreductase 1
OS=Mus musculus GN=Ndor1 PE=2 SV=1
Length = 598

Score = 31.6 bits (70), Expect = 3.5
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Frame = -3

Query: 544 DDIWCESSPSRTEETAVLCKFEPSSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRM 365
+++W S R VLC F ++ + P L+P + P +F AS L
Sbjct: 340 EELWEYCSRPRRTILEVLCDFPHTAGAIPPDYLLDLIP-------RIRPRAFSIASSLLA 392

Query: 364 DERRLELIETCTLYNRRRERSRED-----NGARKRSKNGTQRIKKGMKKGTRVTSRTQD 203
RRL+++ Y R + R + + G R+ ++ G+ V +T D
Sbjct: 393 HPRRLQILVAVVKYQTRLKEPRHGLCSSWLASLNPGQAGPVRVPLWVRPGSLVFPKTPD 451


>sp|Q63755|PRDM2_RAT PR domain zinc finger protein 2 OS=Rattus
norvegicus GN=Prdm2 PE=2 SV=1
Length = 1706

Score = 31.2 bits (69), Expect = 4.5
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -3

Query: 532 CESSPSRTEETAVLCKFEPSSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRMDERR 353
CES RT VL K + + S +C L LSI A V VSF + + + +
Sbjct: 628 CESKKRRTASPPVLPKIKTETESDSTAPSCSLSLPLSISTAEV--VSFHKEKGVYLSSKL 685

Query: 352 LELIET 335
+L++T
Sbjct: 686 KQLLQT 691


>sp|Q535K8|GON4L_RAT GON-4-like protein OS=Rattus norvegicus
GN=Gon4l PE=2 SV=1
Length = 2256

Score = 31.2 bits (69), Expect = 4.5
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 15/128 (11%)
Frame = -3

Query: 436 LPSLSIDEASVNPVSFP-------------EASLLRMDERRLELIETCTLYNRRRERSRE 296
LPSLS S P + P E SL + + E +E L+ E+ E
Sbjct: 178 LPSLSSGSQSAKPRAQPRKSFQPDGSAFPQEKSLGPLVRQAEEDMEDGGLFIPTEEQDGE 237

Query: 295 DNGARKRSKNGTQRIK--KGMKKGTRVTSRTQDACLCEQKALPMQGGKEGAMACVPLNVC 122
++ RK++K GT+R + +G ++GT D L + L G K+ + V +
Sbjct: 238 ESDKRKKTKKGTKRKRDGRGQEQGTMTYDPKVDDML--DRTLE-DGAKQHNLTAVNVRNI 294

Query: 121 LEKHSTNE 98
L + TNE
Sbjct: 295 LHEVITNE 302


>sp|Q6P2W5|ARGL1_XENTR Arginine and glutamate-rich protein 1
OS=Xenopus tropicalis GN=arglu1 PE=2 SV=1
Length = 265

Score = 31.2 bits (69), Expect = 4.5
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -3

Query: 325 YNRRRERSREDNGARKRSKNGTQRIKKGMKKGTRVTSRTQDACLCEQK 182
+N++R RSRE RKRSK ++ K+ ++ +R SR+ A E++
Sbjct: 20 HNKKRSRSREKERVRKRSK--SRESKRNRRRESRSRSRSNTASRRERE 65


>sp|Q4KLS8|ARGL1_XENLA Arginine and glutamate-rich protein 1
OS=Xenopus laevis GN=arglu1 PE=2 SV=1
Length = 265

Score = 31.2 bits (69), Expect = 4.5
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -3

Query: 325 YNRRRERSREDNGARKRSKNGTQRIKKGMKKGTRVTSRTQDACLCEQK 182
+N++R RSRE RKRSK ++ K+ ++ +R SR+ A E++
Sbjct: 20 HNKKRSRSREKERVRKRSK--SRESKRNRRRESRSRSRSNTASRRERE 65


>sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28 OS=Debaryomyces hansenii GN=PRP28 PE=3 SV=2
Length = 580

Score = 30.8 bits (68), Expect = 5.9
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -3

Query: 376 LLRMDERRLELIETCTLYNRRRERSREDNGARKRSKNGTQ------RIKKGMKKG 230
L + + ++L L + +++R++S +NGA+KR N + +I K +KKG
Sbjct: 27 LSKSERQKLSLQRNQEIQDKKRQQSTVNNGAKKRYNNSIEDNPEPKKINKKLKKG 81


>sp|Q5KNY5|PPIL4_CRYNE Peptidyl-prolyl cis-trans isomerase-like 4
OS=Cryptococcus neoformans GN=CYP6 PE=3 SV=1
Length = 504

Score = 30.8 bits (68), Expect = 5.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3

Query: 319 RRRERSREDNGARKRSKNGTQRIKKGMKKGTRVTSRTQD 203
R R+R R+D+ R R +NG R + G ++ R SR ++
Sbjct: 452 RDRDRERDDHDRRDRDRNGRDRERNGDRERYRERSRERE 490


tr_hit_id B6K8Z9
Definition tr|B6K8Z9|B6K8Z9_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 141
Score (bit) 42.4
E-value 0.023
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960321|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_B16, 5'
(627 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6K8Z9|B6K8Z9_TOXGO Putative uncharacterized protein OS=Toxop... 42 0.023
tr|B6KVP5|B6KVP5_TOXGO Putative uncharacterized protein OS=Toxop... 36 2.1
tr|B8MPR3|B8MPR3_9EURO Putative uncharacterized protein OS=Talar... 36 2.1
tr|B8MPR2|B8MPR2_9EURO Putative uncharacterized protein OS=Talar... 36 2.1
tr|Q176B5|Q176B5_AEDAE Rabconnectin (Fragment) OS=Aedes aegypti ... 35 3.7
tr|Q1EPG5|Q1EPG5_MUSAC Double-stranded RNA-binding (DsRBD) domai... 35 4.8
tr|B4GYJ3|B4GYJ3_DROPE GL19788 OS=Drosophila persimilis GN=GL197... 35 4.8
tr|Q5QUV1|Q5QUV1_IDILO Oxaloacetate decarboxylase, alpha subunit... 34 6.2
tr|Q7PGP9|Q7PGP9_ANOGA AGAP002960-PA OS=Anopheles gambiae GN=AGA... 34 6.2
tr|B4Q0V0|B4Q0V0_DROYA GE16912 OS=Drosophila yakuba GN=GE16912 P... 34 6.2
tr|B6SWA1|B6SWA1_MAIZE Dek protein OS=Zea mays PE=2 SV=1 34 8.1
tr|B5DM84|B5DM84_DROPS GA27143 OS=Drosophila pseudoobscura pseud... 34 8.1

>tr|B6K8Z9|B6K8Z9_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_113110 PE=4 SV=1
Length = 679

Score = 42.4 bits (98), Expect = 0.023
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Frame = -3

Query: 532 CESSPSRTEETAVLCKFEPSSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRMDERR 353
C SS S + ++ C F PSSS A P +C PS S +S+ P AS + ++E +
Sbjct: 34 CSSSSSSSSSSSSSCAF-PSSSCASPSSSC-ASPSSSSCSSSLGPSELLSASSVVVEESQ 91

Query: 352 L-ELIETCTLYNRR------RERSREDNGAR-------KRSKNGTQRIKKGMKKGTRVTS 215
E + T R R R +E AR +R + + + M+ G + +
Sbjct: 92 SPEGVSARTAEGNRCSAPAARGREQEKAAARGCRRPGRRRGRRPREETEPCMEGGAKKSH 151

Query: 214 RTQDACLCEQKALPMQGGKEG 152
+T +AC+ E + + G EG
Sbjct: 152 KTNNACVREGERGAQRSGGEG 172


>tr|B6KVP5|B6KVP5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_108010 PE=4 SV=1
Length = 1188

Score = 35.8 bits (81), Expect = 2.1
Identities = 31/115 (26%), Positives = 45/115 (39%)
Frame = -3

Query: 523 SPSRTEETAVLCKFEPSSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRMDERRLEL 344
SPS T L + SSS P PS+S+ A + S P + ++LE
Sbjct: 70 SPSLARRTVSLASSQLPSSSPRPSA-----PSISLRPARSSSFSLPPLPGAGLPRQQLEA 124

Query: 343 IETCTLYNRRRERSREDNGARKRSKNGTQRIKKGMKKGTRVTSRTQDACLCEQKA 179
+ R +R R+ G R + GT R ++ R R + ACL A
Sbjct: 125 AAPHEGHPEREKR-RDSKGTRSENSKGTPRDSGALQHLQREDRRERGACLVSASA 178


>tr|B8MPR3|B8MPR3_9EURO Putative uncharacterized protein
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_052220 PE=4
SV=1
Length = 396

Score = 35.8 bits (81), Expect = 2.1
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = -3

Query: 484 FEPSSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRMDERRLELIETCTLYNRRRER 305
F S++ PG T H +P+ SID ++ +P P++S L + N E
Sbjct: 40 FAADSANEHPGATPHTIPNASIDISNFSPSRSPKSSPNTRPNGNLASTSSAANGNSDTES 99

Query: 304 SREDNGARKRSKNGTQRIKKGMKKGTRVTSRTQD 203
+ + N RSK+ T ++ G+ +T+ T+D
Sbjct: 100 NIQHN---SRSKDSTSSVQS--SNGSSLTNLTED 128


>tr|B8MPR2|B8MPR2_9EURO Putative uncharacterized protein
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_052220 PE=4
SV=1
Length = 396

Score = 35.8 bits (81), Expect = 2.1
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = -3

Query: 484 FEPSSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRMDERRLELIETCTLYNRRRER 305
F S++ PG T H +P+ SID ++ +P P++S L + N E
Sbjct: 40 FAADSANEHPGATPHTIPNASIDISNFSPSRSPKSSPNTRPNGNLASTSSAANGNSDTES 99

Query: 304 SREDNGARKRSKNGTQRIKKGMKKGTRVTSRTQD 203
+ + N RSK+ T ++ G+ +T+ T+D
Sbjct: 100 NIQHN---SRSKDSTSSVQS--SNGSSLTNLTED 128


>tr|Q176B5|Q176B5_AEDAE Rabconnectin (Fragment) OS=Aedes aegypti
GN=AAEL006472 PE=4 SV=1
Length = 3324

Score = 35.0 bits (79), Expect = 3.7
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3

Query: 441 WQVLPGSAEELDGSNLQSTAVSSVRDGEDSHQMSSSASSLIGEEPDDVKELDARDELEQR 620
W +L E + + QS + D DS+ + S L+ +EPD + D R L +R
Sbjct: 1630 WTLLAADKETVGITAQQSEEIKDYNDLFDSNVVDESLDDLLEDEPDISRHTDRRSSLPER 1689

Query: 621 H 623
H
Sbjct: 1690 H 1690


>tr|Q1EPG5|Q1EPG5_MUSAC Double-stranded RNA-binding (DsRBD)
domain-containing protein OS=Musa acuminata
GN=MA4_106O17.54 PE=4 SV=1
Length = 610

Score = 34.7 bits (78), Expect = 4.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +3

Query: 432 GRRWQVLPGSAE-----ELDGSNLQSTAVSSVRDGEDSHQMSSSASSLIGEE 572
G+ W +LP SAE ++ GS+LQS +S + SH+ SL G E
Sbjct: 352 GKEWLILPSSAEAYSALDVSGSSLQSDNISDASTVQKSHEDQEKECSLGGAE 403


>tr|B4GYJ3|B4GYJ3_DROPE GL19788 OS=Drosophila persimilis GN=GL19788
PE=4 SV=1
Length = 226

Score = 34.7 bits (78), Expect = 4.8
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Frame = -3

Query: 526 SSPSRTEETAVLCKFEP--------SSSSADPGKTCHLLPSLSIDEASVNPVSFPEASLL 371
+S + T T K EP ++S+ T + PS S +S P + ++
Sbjct: 54 TSSTTTTTTTTTPKPEPKTASPSTTTTSTTPSTTTSNTTPSPSTTTSSTTPSTTSTTTIT 113

Query: 370 RM--------DERRLELIETCTLYNRRRER----SREDNGARKRSKNGTQRIKKGMKKGT 227
DE +L++ C +RR++R S ED+G K SK+G ++ +K +KK
Sbjct: 114 TTTPKPKDAGDEEAEKLLQQCAELSRRKKRGGSSSEEDSGEGKSSKSG-RKERKQLKKMC 172

Query: 226 RVTSRTQD 203
+ R Q+
Sbjct: 173 KELKRQQE 180


>tr|Q5QUV1|Q5QUV1_IDILO Oxaloacetate decarboxylase, alpha subunit
OS=Idiomarina loihiensis GN=oadA PE=4 SV=1
Length = 603

Score = 34.3 bits (77), Expect = 6.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3

Query: 375 KDASGKLTGLTEASSIDKEGRRWQVLPGSAEELDGSNLQSTAVSSVRDGEDSHQMSSSA 551
+ A+ K TG E ++ EG+R+ V G A +LD S+A SS E S S +
Sbjct: 473 EQAAPKATGDVEQYEVEVEGKRYNVKVGPAGQLDSVKSSSSAESSQSSPEPSQDSSGGS 531


>tr|Q7PGP9|Q7PGP9_ANOGA AGAP002960-PA OS=Anopheles gambiae
GN=AGAP002960 PE=4 SV=3
Length = 447

Score = 34.3 bits (77), Expect = 6.2
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3

Query: 465 EELDGSNLQSTAVSSVRDGEDSHQMSSSASSL--IGEEPDDVKELDARDELEQ 617
+E+DG L+S +R+G D+ Q S+ L + EE +DV+E + + E E+
Sbjct: 318 DEMDGGALKSKKAHRLREGSDAEQYSAKRRKLDDVEEEEEDVEEAEEQMEDEE 370


>tr|B4Q0V0|B4Q0V0_DROYA GE16912 OS=Drosophila yakuba GN=GE16912 PE=4
SV=1
Length = 205

Score = 34.3 bits (77), Expect = 6.2
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = -3

Query: 529 ESSPSRTEETAVLCKFEPSS-SSADPGKTCHLLPSLSIDEASVNPVSFPEASLLRMDERR 353
ES+ + T T+ PS+ SS P T PS + S + + D+
Sbjct: 70 ESTTASTTTTSTTPSTTPSTTSSTTPSTTPSTTPSTT---PSTTTTTTTTTTPKPDDDEA 126

Query: 352 LELIETCTLYNRRRERS------REDNGARKRSKNGTQRIKKGMKKGTRVTSRTQD 203
+L+E C +RR++R +D+G +K +K +++KK K+ + R Q+
Sbjct: 127 AKLLEQCAELSRRKKRGGSSSSEEDDSGEKKSAKKERKQLKKLCKQLKKQEERKQE 182