DK960330 |
Clone id |
TST39A01NGRL0007_C01 |
Library |
TST39 |
Length |
675 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C01. 5' end sequence. |
Accession |
DK960330 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL405Contig1 |
Sequence |
AGAAACAGGGTCCAATGACTCGATGACTGTACGCACGACCGATCTTCGTCTTCCTCTACG GCAGAGAGCTTGAACGGAGAGCATGGGGCGACCGCCGTCAGGAGAAATGCCCGTTTTTCG ATTTCTGCCGAACGAGGTGAACAAACTACTGAGCCTTTGGGAGGATTGCAAAATTAGTGG TCCACCTAATGAAGTTCTGCAAGATCTAGTTGAGAAGTTCAGCAAAGCCAGAGAGCAAGA TGGGAAAGGATGTGTGAATCGAAGGCAGGTGCTCCAGTGGTTTCAAAACAGACGGTGGTA TGTACGTAAACAGGCAGAGAAACAATTGGGAAGGCTATCTGATAAAGAGTCCTTTTCGGA GAGGACGCAAACTACCATCAGTCCTCTCTCAGATGATTTAGATGTAGCTACCCCCACCAC TCCTCCCTCAGATGAGATAGACATGAGTACAGTAGAGTTTGAAGCAAAGTCATCTAAAGA TGGTGCTTGGTATGATGTGCGAACATTCTTAGAGCACAGAATGCTCGACTCTGGACCAGA AGTACGTGTGCGCTTTGCAGGCTATGGGCCAGAAGATGATGAATGGGTGGATGTCAGAAG CGCCGTTCGGCAGCGCTCCTTAGCCTGTGAAGAATCAGATTGTACCTCTATCTNTCGTGG AGACATGGTTCTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60554 |
Definition |
sp|Q60554|NKX61_MESAU Homeobox protein Nkx-6.1 OS=Mesocricetus auratus |
Align length |
74 |
Score (bit) |
37.0 |
E-value |
0.095 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNE3 |
Definition |
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
201 |
Score (bit) |
168.0 |
E-value |
3.0e-40 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960330|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C01, 5' (675 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea... 168 3e-40 tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g1838... 157 8e-37 tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Ar... 157 8e-37 tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea m... 155 3e-36 tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert seque... 153 8e-36 tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea m... 150 9e-35 tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea m... 132 3e-29 tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aest... 118 3e-25 tr|Q9LS52|Q9LS52_ARATH Gb|AAD39678.1 OS=Arabidopsis thaliana PE=... 116 1e-24 tr|A7P4B6|A7P4B6_VITVI Chromosome chr4 scaffold_6, whole genome ... 111 4e-23 tr|A7P1U9|A7P1U9_VITVI Chromosome chr19 scaffold_4, whole genome... 111 5e-23 tr|B4FBT7|B4FBT7_MAIZE Putative uncharacterized protein OS=Zea m... 109 1e-22 tr|A5C728|A5C728_VITVI Putative uncharacterized protein OS=Vitis... 109 2e-22 tr|A2YD14|A2YD14_ORYSI Putative uncharacterized protein OS=Oryza... 109 2e-22 tr|A7P748|A7P748_VITVI Chromosome chr9 scaffold_7, whole genome ... 108 3e-22 tr|Q6ES95|Q6ES95_ORYSJ Os09g0346900 protein OS=Oryza sativa subs... 102 2e-20 tr|B8BEP8|B8BEP8_ORYSI Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|Q0DC52|Q0DC52_ORYSJ Os06g0483900 protein (Fragment) OS=Oryza ... 101 4e-20 tr|Q9XI47|Q9XI47_ARATH F9L1.16 (Uncharacterized protein At1g1521... 97 1e-18 tr|A8MRU8|A8MRU8_ARATH Uncharacterized protein At1g15215.3 OS=Ar... 97 1e-18 tr|Q8GYR2|Q8GYR2_ARATH Putative uncharacterized protein (Putativ... 95 5e-18 tr|B8B2E9|B8B2E9_ORYSI Putative uncharacterized protein OS=Oryza... 91 7e-17 tr|A3BBV7|A3BBV7_ORYSJ Putative uncharacterized protein OS=Oryza... 91 7e-17 tr|Q0DC47|Q0DC47_ORYSJ Os06g0485100 protein OS=Oryza sativa subs... 85 5e-15 tr|Q2PEU2|Q2PEU2_TRIPR Putative uncharacterized protein OS=Trifo... 84 8e-15 tr|A5BT31|A5BT31_VITVI Putative uncharacterized protein OS=Vitis... 80 1e-13 tr|A3BBU9|A3BBU9_ORYSJ Putative uncharacterized protein OS=Oryza... 80 2e-13 tr|A3BXT4|A3BXT4_ORYSJ Putative uncharacterized protein OS=Oryza... 79 3e-13 tr|A7P1V0|A7P1V0_VITVI Chromosome chr19 scaffold_4, whole genome... 75 3e-12 tr|B4FI09|B4FI09_MAIZE Putative uncharacterized protein OS=Zea m... 71 7e-11
>tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 373
Score = 168 bits (426), Expect = 3e-40 Identities = 90/201 (44%), Positives = 127/201 (63%), Gaps = 4/201 (1%) Frame = +2
Query: 83 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 262 MGRPP PVFRF EV ++ + ED K + P ++++ L EKFS + E+DGK V Sbjct: 1 MGRPPLSGAPVFRFSSKEVQEMEKVLEDTKGAIPNRDMIRSLAEKFSASPERDGKILVQI 60
Query: 263 RQVLQWFQNRRWYVRKQAEKQLGRLSDK---ESFSERTQTTISPLSDDLDVATPTTPPSD 433 +QV WFQN+R+ + ++ K G + +S ++R T+ + + V Sbjct: 61 KQVWTWFQNKRYSQKTKSTKVQGNAAPSPRDDSVAKRAVTSSAAVPSGRKVP-------- 112
Query: 434 EIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVR 610 D + +EFEAKSS+DGAWYDV +F+ HRM +SG PEVRVRFAG+G E+DEWV+VR VR Sbjct: 113 --DGAEMEFEAKSSRDGAWYDVASFVTHRMFESGDPEVRVRFAGFGAEEDEWVNVRKCVR 170
Query: 611 QRSLACEESDCTSIXRGDMVL 673 QRSL CE S+C ++ GD++L Sbjct: 171 QRSLPCESSECVAVLPGDLIL 191
>tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g18380 OS=Arabidopsis thaliana GN=At3g18380 PE=2 SV=1 Length = 348
Score = 157 bits (396), Expect = 8e-37 Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 22/219 (10%) Frame = +2
Query: 83 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 262 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 263 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 406 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 407 ATPTTPPSDEI---------DMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRF 556 TP PS + D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRF Sbjct: 121 MTPA--PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRF 178
Query: 557 AGYGPEDDEWVDVRSAVRQRSLACEESDCTSIXRGDMVL 673 AG+ E+DEW++V+ VRQRSL CE S+C ++ GD+VL Sbjct: 179 AGFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVL 217
>tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Arabidopsis thaliana GN=At3g18380 PE=4 SV=1 Length = 349
Score = 157 bits (396), Expect = 8e-37 Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 22/219 (10%) Frame = +2
Query: 83 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 262 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 263 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 406 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 407 ATPTTPPSDEI---------DMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRF 556 TP PS + D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRF Sbjct: 121 MTPA--PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRF 178
Query: 557 AGYGPEDDEWVDVRSAVRQRSLACEESDCTSIXRGDMVL 673 AG+ E+DEW++V+ VRQRSL CE S+C ++ GD+VL Sbjct: 179 AGFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVL 217
>tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 155 bits (391), Expect = 3e-36 Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 11/208 (5%) Frame = +2
Query: 83 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 262 MGRPPS P FRFLP+EV ++ + P VLQ L +KFS + E+ GK + Sbjct: 1 MGRPPSAGAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQP 60
Query: 263 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVAT---------- 412 +QV WFQNRR+ R + + K + S + + A Sbjct: 61 KQVWNWFQNRRYSHRAKTPRAASSPPAKMTPSGADHHQHAANASAFRAAQLSSVAAAHHG 120
Query: 413 PTTPPSDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWV 589 ++ + ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW+ Sbjct: 121 SSSTGKNPVESVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWI 180
Query: 590 DVRSAVRQRSLACEESDCTSIXRGDMVL 673 +VR VRQRSL CE ++C ++ GD++L Sbjct: 181 NVRKCVRQRSLPCEATECVAVLPGDLIL 208
>tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1568_D07.5-1 PE=2 SV=1 Length = 370
Score = 153 bits (387), Expect = 8e-36 Identities = 83/201 (41%), Positives = 121/201 (60%), Gaps = 4/201 (1%) Frame = +2
Query: 83 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 262 MGRPPS P FRF EV ++ + + + P V+Q L +KF+ + + GK V Sbjct: 1 MGRPPSTGGPAFRFTQAEVAEMEARLQQLNNAIPHRSVIQALADKFTSSPARSGKVAVQP 60
Query: 263 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTT-PPSDE- 436 +QV WFQNRR+ R ++ + L + + SP + A+ + PS + Sbjct: 61 KQVWNWFQNRRYSHRSRSSRGPPTLMQTKMLPTGSDEHKSPPFRAMPSASAHSGSPSGKG 120
Query: 437 -IDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVR 610 ++ VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW++VR VR Sbjct: 121 SLESGQVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVR 180
Query: 611 QRSLACEESDCTSIXRGDMVL 673 QRSL CE ++C ++ GD++L Sbjct: 181 QRSLPCESTECVAVLPGDLIL 201
>tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 382
Score = 150 bits (378), Expect = 9e-35 Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Frame = +2
Query: 83 MGRPPSGE-MPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVN 259 MGRPPS P FRFLP+EV ++ + P +LQ L +KFS + E+ GK + Sbjct: 1 MGRPPSTTGAPAFRFLPSEVAEMEARLLQLNNGIPTRAMLQTLADKFSASPERAGKVAIQ 60
Query: 260 RRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPP---- 427 +QV WFQNRR+ R + + + K + S + + A P++ Sbjct: 61 PKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSGADHHQHAANASAFRAAQPSSVAVAHH 120
Query: 428 ------SDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEW 586 + ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW Sbjct: 121 GSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEW 180
Query: 587 VDVRSAVRQRSLACEESDCTSIXRGDMVL 673 ++VR VRQRSL CE ++C ++ GD++L Sbjct: 181 INVRKCVRQRSLPCEATECVAVLPGDLIL 209
>tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 360
Score = 132 bits (331), Expect = 3e-29 Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 11/175 (6%) Frame = +2
Query: 182 PPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSE 361 P +LQ L +KFS + E+ GK + +QV WFQNRR+ R + + + K + S Sbjct: 13 PTRAMLQTLADKFSASPERAGKVAIQPKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSG 72
Query: 362 RTQTTISPLSDDLDVATPTTPP----------SDEIDMSTVEFEAKSSKDGAWYDVRTFL 511 + + A P++ + ++ +VEFEAKS++DGAWYDV FL Sbjct: 73 ADHHQHAANASAFRAAQPSSVAVAHHGSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFL 132
Query: 512 EHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVRQRSLACEESDCTSIXRGDMVL 673 HR+ +SG PEVRVRF+G+G E+DEW++VR VRQRSL CE ++C ++ GD++L Sbjct: 133 SHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVRQRSLPCEATECVAVLPGDLIL 187
>tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aestivum GN=HLRG PE=2 SV=1 Length = 337
Score = 118 bits (296), Expect = 3e-25 Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 5/197 (2%) Frame = +2
Query: 98 SGEMP--VFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKA--REQDGKGCVNRR 265 +G+ P +FRF EV K+ + D P + V+Q L + F+ + R DGK V Sbjct: 2 TGQAPSLLFRFTDTEVAKMEEVLRDLNAM-PKHPVIQGLTDDFNASPDRSGDGKVPVQYN 60
Query: 266 QVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSDEIDM 445 QV WFQNRR Q+ K + + P++++ + + +D Sbjct: 61 QVRNWFQNRR---SAQSRKMM----------------VPPVAEEHHPVDGSYSGNSSLDG 101
Query: 446 STVEFEAKSSKDGAWYDVRTFLEHRMLDS-GPEVRVRFAGYGPEDDEWVDVRSAVRQRSL 622 V+FEAKS+ +GAWYDV FL HR + + PEV VRF GPE+DEW++VR VR RSL Sbjct: 102 GHVQFEAKSAINGAWYDVAAFLSHRFIGTKDPEVLVRFTWLGPEEDEWINVRKCVRLRSL 161
Query: 623 ACEESDCTSIXRGDMVL 673 CE ++C ++ GD++L Sbjct: 162 PCEAAECVAVLPGDLIL 178
>tr|Q9LS52|Q9LS52_ARATH Gb|AAD39678.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 323
Score = 116 bits (291), Expect = 1e-24 Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 22/186 (11%) Frame = +2
Query: 182 PPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWYVRKQAEKQLGRLS----DKE 349 P +L+ L +KFS++ E+ GK V Q +R+ +R + K G+L+ + Sbjct: 18 PGRHILEALADKFSESPERKGKVVV---------QFKRYALRARGNKAPGKLNVSSMPRM 68
Query: 350 SFSERTQTTISPLS--------DDLDVATPTTPPSDEI---------DMSTVEFEAKSSK 478 + ++ I PLS +L TP PS + D S +EFEAKS++ Sbjct: 69 DLPNQMRSVIQPLSVPKTTHMTGNLPGMTPA--PSGSLVPGVMRSGSDNSYLEFEAKSAR 126
Query: 479 DGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVRQRSLACEESDCTSIX 655 DGAWYDV+ FL HR L+ G PEV+VRFAG+ E+DEW++V+ VRQRSL CE S+C ++ Sbjct: 127 DGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVL 186
Query: 656 RGDMVL 673 GD+VL Sbjct: 187 AGDLVL 192
>tr|A7P4B6|A7P4B6_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032090001 PE=4 SV=1 Length = 314
Score = 111 bits (278), Expect = 4e-23 Identities = 73/197 (37%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Frame = +2
Query: 122 FLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWY 301 F EV K+ + ++ + + L F+++ + GK + +V WFQ+R Sbjct: 15 FTKLEVEKMEKVLKESGEQALNPDFCKRLTGGFNRSSGRAGKPAIKWIEVQSWFQDR--- 71
Query: 302 VRKQAEKQLGRLSDKESFSERTQTTISP--LSDDLDVATPTTP----------PSDEIDM 445 E T P +S +L V T P P + D+ Sbjct: 72 -----------------LQECTHKVSCPPNVSKELCVLPETFPSNKLHESSQMPEGDPDL 114
Query: 446 STVEFEAKSSKDGAWYDVRTFLEHRMLDSGP-EVRVRFAGYGPEDDEWVDVRSAVRQRSL 622 S +EFEA+SSKDGAWYDV TFL HR L SG EVRVRF G+G E+DEWV+V+ AVR+RSL Sbjct: 115 SELEFEARSSKDGAWYDVDTFLTHRFLSSGELEVRVRFVGFGAEEDEWVNVKKAVRERSL 174
Query: 623 ACEESDCTSIXRGDMVL 673 E S+C + GD+VL Sbjct: 175 PLEHSECHKVKVGDVVL 191
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