DK960336
Clone id TST39A01NGRL0007_C07
Library
Length 652
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCCGATACATGCTCTTGTATGGAGGCGGAAGACACTGCGGGTACGAATATTCATAACACT
AGTAGCAGCTCAGAGAGCCATGGCAGGCCCGATTGCAGAGTCCGCTCCACCACCGCCCAC
AAACAAGGATGATCACGGCAGTGGTGGGCGGACGGCGCGCAACCTTGTGGTGACTGCTCT
CGGCCTGCTGGGCGGTGCCCTTCTTTTGCGCAAGCTCTCCAAGAGCACTCCTCCATGGGA
TCACCCACGCAAGGTCTCAGATGCTCTCGTTGGTGAAAAGTTTTCTACTGAGCAAGCTAC
ACAAGATCCAGAGACATACTTCAATTTGAGGCTAAATGCATGCCCAGCAGCAGAGCTTGC
AGACGGCTCAAGGATTATATATGTAGAACAGGCTTTTTGGAGGACACCCGACAAACCTTA
TCGACAGAGATTCCTAAAGGTGAAGCCTTGCCCAAAGGACGTGAAGTGCGACGTGGAGGT
TTCATCGTATGCTGTAAGAGATGCTGAAGAGTACAAAAATTTCTGTGAGCGGCCAGGGAA
TCAGCGTCCACAGCCAGAGGAAATTTCCAGGGATTTGGCTGAACATTTGACAACCATACA
CCTTTCCCATTGTGGACAAGGAGAACAATGTTTGTACAAGGGTTCAACGCCT
■■Homology search results ■■ -
sp_hit_id Q495Z4
Definition sp|Q495Z4|CQ065_HUMAN Uncharacterized protein C17orf65 OS=Homo sapiens
Align length 72
Score (bit) 31.6
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960336|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C07, 5'
(652 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q495Z4|CQ065_HUMAN Uncharacterized protein C17orf65 OS=Homo s... 32 3.8
sp|Q9RJ50|SYY_STRCO Tyrosyl-tRNA synthetase OS=Streptomyces coel... 31 6.5

>sp|Q495Z4|CQ065_HUMAN Uncharacterized protein C17orf65 OS=Homo
sapiens GN=C17orf65 PE=2 SV=2
Length = 193

Score = 31.6 bits (70), Expect = 3.8
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +1

Query: 52 HNTSSSSESHGRPDCRVRSTTAHKQG*SRQWWADGAQPCGDCSRPAGRCPSFAQALQEHS 231
H+ + H P R+ A + G +W A CG C+RP G LQ
Sbjct: 39 HSPWACGPPHWGPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPG------HQLQPPG 92

Query: 232 SMGSPTQGLRCS 267
+ G+P G+ CS
Sbjct: 93 A-GAPQPGVACS 103


>sp|Q9RJ50|SYY_STRCO Tyrosyl-tRNA synthetase OS=Streptomyces
coelicolor GN=tyrS PE=3 SV=1
Length = 422

Score = 30.8 bits (68), Expect = 6.5
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2

Query: 338 ACPAAELADGSRIIYVEQ-AFWRTPDK--PYRQRFLKVKPCPKDVKCDVEVSSYAVR-DA 505
A P ADG++ E A W P+ PY + +D+ + + S+ R +
Sbjct: 220 ATPLMTKADGTKFGKTEGGAVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAEL 279

Query: 506 EEYKNFCERPGNQRPQPEEISRDLAEHLTTI 598
EE ER +RPQ R LAE LTT+
Sbjct: 280 EEL----ERQTEERPQARAAQRALAEELTTL 306


tr_hit_id Q2R3F0
Definition tr|Q2R3F0|Q2R3F0_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica
Align length 172
Score (bit) 239.0
E-value 8.0e-62
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960336|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C07, 5'
(652 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2R3F0|Q2R3F0_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 239 8e-62
tr|B8BKT1|B8BKT1_ORYSI Putative uncharacterized protein OS=Oryza... 239 8e-62
tr|A3CBT2|A3CBT2_ORYSJ Putative uncharacterized protein OS=Oryza... 239 8e-62
tr|A9SQ89|A9SQ89_PHYPA Predicted protein OS=Physcomitrella paten... 237 4e-61
tr|A9SC55|A9SC55_PHYPA Predicted protein OS=Physcomitrella paten... 236 1e-60
tr|A5BED1|A5BED1_VITVI Putative uncharacterized protein (Chromos... 229 8e-59
tr|Q9FI46|Q9FI46_ARATH Genomic DNA, chromosome 5, TAC clone:K3K7... 224 3e-57
tr|Q8LCJ3|Q8LCJ3_ARATH Putative uncharacterized protein OS=Arabi... 222 2e-56
tr|B7KLF4|B7KLF4_9CHRO Putative uncharacterized protein OS=Cyano... 59 3e-07
tr|B0JGA0|B0JGA0_MICAN Putative uncharacterized protein OS=Micro... 52 4e-05
tr|A8YDV9|A8YDV9_MICAE Genome sequencing data, contig C295 OS=Mi... 51 7e-05
tr|Q3M4B0|Q3M4B0_ANAVT Putative uncharacterized protein OS=Anaba... 45 0.003
tr|A9E8W7|A9E8W7_9FLAO Putative uncharacterized protein OS=Kordi... 45 0.004
tr|Q8YZ40|Q8YZ40_ANASP Alr0647 protein OS=Anabaena sp. (strain P... 45 0.005
tr|P74371|P74371_SYNY3 Slr1649 protein OS=Synechocystis sp. (str... 45 0.005
tr|B4AXC2|B4AXC2_9CHRO Putative uncharacterized protein OS=Cyano... 45 0.005
tr|A0YTQ3|A0YTQ3_9CYAN Putative uncharacterized protein OS=Lyngb... 45 0.005
tr|B2J352|B2J352_NOSP7 Putative uncharacterized protein OS=Nosto... 44 0.009
tr|A4CSE4|A4CSE4_SYNPV Putative uncharacterized protein OS=Synec... 42 0.033
tr|Q2JRQ9|Q2JRQ9_SYNJA Putative uncharacterized protein OS=Synec... 41 0.056
tr|A5GVM7|A5GVM7_SYNR3 Putative uncharacterized protein SynRCC30... 40 0.095
tr|B7KI39|B7KI39_9CHRO Putative uncharacterized protein OS=Cyano... 40 0.095
tr|B8LMJ4|B8LMJ4_PICSI Putative uncharacterized protein OS=Picea... 40 0.12
tr|A0YMI7|A0YMI7_9CYAN Putative uncharacterized protein OS=Lyngb... 39 0.28
tr|Q05Q33|Q05Q33_9SYNE Putative uncharacterized protein OS=Synec... 39 0.36
tr|Q5N442|Q5N442_SYNP6 Putative uncharacterized protein OS=Synec... 38 0.47
tr|Q3JDN1|Q3JDN1_NITOC Helicase-like OS=Nitrosococcus oceani (st... 38 0.47
tr|Q31Q37|Q31Q37_SYNE7 Putative uncharacterized protein OS=Synec... 38 0.47
tr|B6C410|B6C410_9GAMM Helicase conserved C-terminal domain prot... 38 0.47
tr|B1X536|B1X536_PAUCH Putative uncharacterized protein OS=Pauli... 38 0.47

>tr|Q2R3F0|Q2R3F0_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=Os11g0524300 PE=2 SV=1
Length = 275

Score = 239 bits (611), Expect = 8e-62
Identities = 108/172 (62%), Positives = 130/172 (75%)
Frame = +2

Query: 137 GSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQATQDPET 316
G G R V+ R+L +ST WDH R V DAL GEKFS EQA +DP+
Sbjct: 18 GGAGGVVRGAVLKALVVVGGVLLLRRLRRSTTRWDHARAVVDALSGEKFSREQARKDPDN 77

Query: 317 YFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYAV 496
YFNLR+ CPA E+ DGSR++Y EQAFWR+P+KP+RQRF VKPCPKD+KCDVE+SSYA+
Sbjct: 78 YFNLRMLTCPATEMVDGSRVLYFEQAFWRSPEKPFRQRFYMVKPCPKDMKCDVELSSYAI 137

Query: 497 RDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
RD EEYKNFC+RP +QRPQPEE+ D+AEHLTTIHLS C +G++CLYKGSTP
Sbjct: 138 RDVEEYKNFCDRPKDQRPQPEEVIADIAEHLTTIHLSRCERGKRCLYKGSTP 189


>tr|B8BKT1|B8BKT1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36301 PE=4 SV=1
Length = 275

Score = 239 bits (611), Expect = 8e-62
Identities = 108/172 (62%), Positives = 130/172 (75%)
Frame = +2

Query: 137 GSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQATQDPET 316
G G R V+ R+L +ST WDH R V DAL GEKFS EQA +DP+
Sbjct: 18 GGAGGVVRGAVLKALVVVGGVLLLRRLRRSTTRWDHARAVVDALSGEKFSREQARKDPDN 77

Query: 317 YFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYAV 496
YFNLR+ CPA E+ DGSR++Y EQAFWR+P+KP+RQRF VKPCPKD+KCDVE+SSYA+
Sbjct: 78 YFNLRMLTCPATEMVDGSRVLYFEQAFWRSPEKPFRQRFYMVKPCPKDMKCDVELSSYAI 137

Query: 497 RDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
RD EEYKNFC+RP +QRPQPEE+ D+AEHLTTIHLS C +G++CLYKGSTP
Sbjct: 138 RDVEEYKNFCDRPKDQRPQPEEVIADIAEHLTTIHLSRCERGKRCLYKGSTP 189


>tr|A3CBT2|A3CBT2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032754 PE=4 SV=1
Length = 275

Score = 239 bits (611), Expect = 8e-62
Identities = 108/172 (62%), Positives = 130/172 (75%)
Frame = +2

Query: 137 GSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQATQDPET 316
G G R V+ R+L +ST WDH R V DAL GEKFS EQA +DP+
Sbjct: 18 GGAGGVVRGAVLKALVVVGGVLLLRRLRRSTTRWDHARAVVDALSGEKFSREQARKDPDN 77

Query: 317 YFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYAV 496
YFNLR+ CPA E+ DGSR++Y EQAFWR+P+KP+RQRF VKPCPKD+KCDVE+SSYA+
Sbjct: 78 YFNLRMLTCPATEMVDGSRVLYFEQAFWRSPEKPFRQRFYMVKPCPKDMKCDVELSSYAI 137

Query: 497 RDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
RD EEYKNFC+RP +QRPQPEE+ D+AEHLTTIHLS C +G++CLYKGSTP
Sbjct: 138 RDVEEYKNFCDRPKDQRPQPEEVIADIAEHLTTIHLSRCERGKRCLYKGSTP 189


>tr|A9SQ89|A9SQ89_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_133413 PE=4 SV=1
Length = 277

Score = 237 bits (605), Expect = 4e-61
Identities = 109/173 (63%), Positives = 134/173 (77%), Gaps = 1/173 (0%)
Frame = +2

Query: 137 GSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQATQDPET 316
G GGR R LV+ RKL+KST WDH RKV+ +L GEKFSTEQA +DP T
Sbjct: 43 GGGGRMVRGLVIKAACLIGGAFLLRKLTKSTTRWDHARKVAQSLSGEKFSTEQAARDPTT 102

Query: 317 YFNL-RLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYA 493
YFNL RL CPA LADG+R++Y EQAFWRTP++PYRQRF +KPCPK++KCDVEVSSYA
Sbjct: 103 YFNLSRLLTCPATVLADGARVMYFEQAFWRTPERPYRQRFYSIKPCPKEMKCDVEVSSYA 162

Query: 494 VRDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
VRD EEYKNFC+R ++RPQP+E+ +D+AEHL T++LS C +G +CLY+GSTP
Sbjct: 163 VRDIEEYKNFCDRSKDERPQPDEVLKDMAEHLNTVYLSVCERGRRCLYEGSTP 215


>tr|A9SC55|A9SC55_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_210691 PE=4 SV=1
Length = 342

Score = 236 bits (601), Expect = 1e-60
Identities = 107/172 (62%), Positives = 130/172 (75%)
Frame = +2

Query: 137 GSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQATQDPET 316
G GGR R LVV RKL+K+T WDH R V AL GEKFSTEQA +DP T
Sbjct: 86 GGGGRMVRGLVVKAACLIGGAFLLRKLTKTTTRWDHARMVVQALSGEKFSTEQAARDPMT 145

Query: 317 YFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYAV 496
YFNLR CPA LADG+ ++Y EQAFWRTP++PYRQRF VKPCPK++KCDVEV SYAV
Sbjct: 146 YFNLRFLTCPATVLADGAHVMYFEQAFWRTPERPYRQRFYNVKPCPKEMKCDVEVGSYAV 205

Query: 497 RDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
RD E+Y+NFC+RP +QRPQP+E+ +D+AEHL T++LS C +G +CLY+GSTP
Sbjct: 206 RDIEDYRNFCDRPKDQRPQPDEVLKDVAEHLNTVYLSACERGRRCLYEGSTP 257


>tr|A5BED1|A5BED1_VITVI Putative uncharacterized protein (Chromosome
chr17 scaffold_16, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00018055001 PE=4 SV=1
Length = 267

Score = 229 bits (585), Expect = 8e-59
Identities = 104/178 (58%), Positives = 133/178 (74%)
Frame = +2

Query: 119 TNKDDHGSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQA 298
++ + G+G AR ++V ++L+KST WDH R VS +L GEKFS EQA
Sbjct: 5 SDSESEGNGWGRARGILVKAAVLIGGAILLKRLTKSTTRWDHARFVSHSLSGEKFSMEQA 64

Query: 299 TQDPETYFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVE 478
++DP+ YFN R+ CPAAEL DGSR++Y EQAFWRTP KP+RQRF VKPCPK++KCDVE
Sbjct: 65 SRDPDNYFNFRMVTCPAAELVDGSRVLYFEQAFWRTPSKPFRQRFYMVKPCPKEMKCDVE 124

Query: 479 VSSYAVRDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
+SSYA+RD EEYKNFC+R QRP PEE+ D+AEHLTTI+L C +G++CLY+GSTP
Sbjct: 125 LSSYAIRDVEEYKNFCDRSKAQRPLPEEVIGDIAEHLTTIYLKRCERGKRCLYEGSTP 182


>tr|Q9FI46|Q9FI46_ARATH Genomic DNA, chromosome 5, TAC clone:K3K7
(CRUMPLED LEAF) (Putative uncharacterized protein
At5g51020) OS=Arabidopsis thaliana GN=CRL PE=2 SV=1
Length = 269

Score = 224 bits (572), Expect = 3e-57
Identities = 102/177 (57%), Positives = 134/177 (75%)
Frame = +2

Query: 119 TNKDDHGSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQA 298
++ + +G AR LVV ++L+KST DH R VS +L GEKF+ EQA
Sbjct: 7 SDPESSSNGWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGEKFTREQA 66

Query: 299 TQDPETYFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVE 478
++DP+ YFN+R+ +CPAAE+ DGS ++Y+EQAFWRTP KP+RQR VKPCPK++KCDVE
Sbjct: 67 SRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFRQRLYMVKPCPKELKCDVE 126

Query: 479 VSSYAVRDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGST 649
VSSYA+RDAEEYKNFC+RP +QRP PEE+ D+ EHLTTIHL+ C +G++CLY+GST
Sbjct: 127 VSSYAIRDAEEYKNFCDRPKDQRPLPEEVIGDIGEHLTTIHLNCCDRGKRCLYEGST 183


>tr|Q8LCJ3|Q8LCJ3_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 269

Score = 222 bits (565), Expect = 2e-56
Identities = 101/177 (57%), Positives = 133/177 (75%)
Frame = +2

Query: 119 TNKDDHGSGGRTARNLVVTXXXXXXXXXXXRKLSKSTPPWDHPRKVSDALVGEKFSTEQA 298
++ + +G AR LVV ++L+KST DH R VS +L GEKF+ EQA
Sbjct: 7 SDPESSSNGWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGEKFTREQA 66

Query: 299 TQDPETYFNLRLNACPAAELADGSRIIYVEQAFWRTPDKPYRQRFLKVKPCPKDVKCDVE 478
++DP+ YFN+R+ +CPAAE+ DGS ++Y+EQAFWRTP KP+RQR VKPCPK++KCDVE
Sbjct: 67 SRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFRQRLYMVKPCPKELKCDVE 126

Query: 479 VSSYAVRDAEEYKNFCERPGNQRPQPEEISRDLAEHLTTIHLSHCGQGEQCLYKGST 649
VSSYA+RDAEEYK FC+RP +QRP PEE+ D+ EHLTTIHL+ C +G++CLY+GST
Sbjct: 127 VSSYAIRDAEEYKXFCDRPKDQRPLPEEVIGDIGEHLTTIHLNCCDRGKRCLYEGST 183


>tr|B7KLF4|B7KLF4_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 7424 GN=PCC7424_4155 PE=3 SV=1
Length = 212

Score = 58.9 bits (141), Expect = 3e-07
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2

Query: 218 SKSTPPWDHPRKVSDALVGEKFSTEQATQDPETYFNLRLNACPAAELADGSRI-IYVEQA 394
+++ P H V LVG ++ Q ++P N+R+ C I +Y EQA
Sbjct: 21 AQAVPVQTHINSVVSHLVGVMDTSAQVAKNPNKA-NVRMTTCQVTLTGGNDSIYLYQEQA 79

Query: 395 FWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYAVRDAEEYKNFCERPGNQR 547
+T DKPYRQRFL++KP + VE SY AE FC +P ++R
Sbjct: 80 LTKTLDKPYRQRFLEIKPTLEPE--TVESKSYKPLQAERLIGFCNKPLSER 128


>tr|B0JGA0|B0JGA0_MICAN Putative uncharacterized protein
OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_22830
PE=4 SV=1
Length = 202

Score = 51.6 bits (122), Expect = 4e-05
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +2

Query: 215 LSKSTPPWDHPRKVSDALVGEKFSTEQATQDPETYFNLRLNACPAAELA--DGSRIIYVE 388
L++S P + V++ L+G + EQA +P +++ C A + + S +Y E
Sbjct: 12 LTQSLPLNPQVQGVANHLIGVMDTREQAQTNPRIA-KVQMTTC-AVDFSPKQDSIYLYQE 69

Query: 389 QAFWRTPDKPYRQRFLKVKPCPKDVKCDVEVSSYAVRDAEEYKNFCERPGNQRPQPEEIS 568
QA ++PYRQR L ++P + VE +Y + +A + NFC + +R E
Sbjct: 70 QAIIDRLNQPYRQRILVIQPSADN--STVESKAYKLNNAPNFINFCNKDLTER---ELNV 124

Query: 569 RDLAEHLTTIHLSHCGQGEQCLYKGSTP 652
DLAE + T+ L G Y+G TP
Sbjct: 125 SDLAESVCTVFLQPIAGG----YRGETP 148