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NBDC - LSDB Archive
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DK960337
Clone id TST39A01NGRL0007_C08
Library
Length 615
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CATGAGCATGGCGCCCAAGAAGAAGCAGGATGCGTATGACGCAGGCGCAACAAATAAGCG
CGCCAGGCTAGGGTCACCTCCTCCTTCGAAGAGAAAACCGGCACTCAATTCGCTGGACTG
CAACCTTGATTTTACGGTGGAATCAGATGGAATTACTGGAAGCGCTCTGTGCAACGAAGG
GTTTGCCTACTGCTGGTCAGGTGCACGAGCAACTTTTGGTGTGAAGGGAGGCAAGTACTG
TTTTGGATGTCGAGTGATTGAGAATCAGCAAGTAATCATGGAGGATACTGCCAAGGATCA
GCAAAACCTTTGTAGAGTGGGTCTGTCTAGAGGTGACAGTGATGTTGGCAGTCTTGGTGA
AAGCAGCACTAGTTTTGGCTATGGAGGAACCGGGAAGTTTTCACATGGTGGAGATTTCAC
TGGTTATGGAGGCGTCTTTGGTGTTGGAGATATAATCATGTGTGCAGTTGATTTAGATAA
TCCATCCGAAGCGAAAGTCTCTTTTGCAAAAAACGGAAAATGGCTTGCAGTGGCTGTCGA
ATTTGATGCACGTCGCAGAGGCCTGGACATCGTATGGGCTCTAGATCACCATAAGGCCGT
ATTCCCTCACATTTT
■■Homology search results ■■ -
sp_hit_id Q8VDM6
Definition sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus
Align length 194
Score (bit) 103.0
E-value 7.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960337|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C08, 5'
         (615 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-...   103   7e-22
sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-...   103   7e-22
sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U ...    73   1e-12
sp|Q00PI9|HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein U-...    68   4e-11
sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-...    68   4e-11
sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus g...    67   7e-11
sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus ...    65   3e-10
sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus ...    64   8e-10
sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus nor...    62   2e-09
sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo ab...    61   4e-09
sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca f...    61   4e-09
sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sap...    61   4e-09
sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos taur...    61   4e-09
sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus musc...    60   7e-09
sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophi...    59   3e-08
sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS...    53   1e-06
sp|Q9JM55|TOB2_MOUSE Protein Tob2 OS=Mus musculus GN=Tob2 PE=2 SV=1    32   3.4  
sp|Q0P5B4|THAP3_BOVIN THAP domain-containing protein 3 OS=Bos ta...    32   3.4  
sp|Q039K2|ENGB_LACC3 Probable GTP-binding protein engB OS=Lactob...    31   4.4  
sp|P32743|YNH5_CAEEL Uncharacterized protein R107.5 OS=Caenorhab...    30   7.5  
sp|Q5TYS5|SCRN2_DANRE Secernin-2 OS=Danio rerio GN=scrn2 PE=2 SV=1     30   7.5  
sp|Q1RH23|GCP_RICBR Probable O-sialoglycoprotein endopeptidase O...    30   7.5  
sp|A8GU95|GCP_RICB8 Probable O-sialoglycoprotein endopeptidase O...    30   7.5  

>sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein
           U-like protein 1 OS=Mus musculus GN=Hnrnpul1 PE=2 SV=1
          Length = 859

 Score =  103 bits (257), Expect = 7e-22
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
 Frame = +2

Query: 53  NKRARLGSPPPSKRKP-------ALNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARA 211
           ++R R   PP  + +        A+++ +C+L F V  D  +G  L  EGFAY WSGARA
Sbjct: 190 DRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARA 249

Query: 212 TFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGT 391
           ++GV+ G+ CF  ++ E   V    + +   ++ R+G S  DS    LGE   S+GYGGT
Sbjct: 250 SYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL-DSCSTQLGEEPFSYGYGGT 308

Query: 392 GKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAVEFDARRRGLDI 571
           GK S                +I C  D +  ++ ++SF KNGKW+ +A        G   
Sbjct: 309 GKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALG--- 365

Query: 572 VWALDHHKAVFPHI 613
                  +A++PH+
Sbjct: 366 ------GQALYPHV 373


>sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein
           U-like protein 1 OS=Homo sapiens GN=HNRNPUL1 PE=1 SV=2
          Length = 856

 Score =  103 bits (257), Expect = 7e-22
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
 Frame = +2

Query: 53  NKRARLGSPPPSKRKP-------ALNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARA 211
           ++R R   PP  + +        A+++ +C+L F V  D  +G  L  EGFAY WSGARA
Sbjct: 189 DRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARA 248

Query: 212 TFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGT 391
           ++GV+ G+ CF  ++ E   V    + +   ++ R+G S  DS    LGE   S+GYGGT
Sbjct: 249 SYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL-DSCSTQLGEEPFSYGYGGT 307

Query: 392 GKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAVEFDARRRGLDI 571
           GK S                +I C  D +  ++ ++SF KNGKW+ +A        G   
Sbjct: 308 GKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALG--- 364

Query: 572 VWALDHHKAVFPHI 613
                  +A++PH+
Sbjct: 365 ------GQALYPHV 372


>sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U
           OS=Homo sapiens GN=HNRNPU PE=1 SV=5
          Length = 824

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
 Frame = +2

Query: 53  NKRARLGSPPPSKRKP---------ALNSLDCNLDFTVESDGITGSALCNEGFAYCWSGA 205
           NK +R  SP P   +           L++ +C+L F +  D ++ S+L  E FA+ W+G 
Sbjct: 263 NKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGG 322

Query: 206 RATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYG 385
           RA++GV  GK CF  +V E   V    T     +  R+G S   S +  LGE   S+GY 
Sbjct: 323 RASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGM-LLGEEEFSYGYS 381

Query: 386 GTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVA 535
             G  +                +I C  + ++  E ++S+AKNG+ L VA
Sbjct: 382 LKGIKTCNCETEDYGEKFDENDVITCFANFES-DEVELSYAKNGQDLGVA 430


>sp|Q00PI9|HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein
           U-like protein 2 OS=Mus musculus GN=Hnrnpul2 PE=1 SV=1
          Length = 745

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
 Frame = +2

Query: 62  ARLGSPPPSKRKPA----------LNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARA 211
           +R  SPPP + +            L++   +L F +  D   G  L +E F   W GAR+
Sbjct: 222 SRSKSPPPPEEEAKDEEEDQTLVNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWFGARS 281

Query: 212 TFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGT 391
           T+GV  GK CF  +V +N  +    T   + +L RVG S  D     LGE   S+G+ G 
Sbjct: 282 TYGVTKGKVCFEAKVTQNLPMKEGCT---EVSLLRVGWS-VDFSCSQLGEDEFSYGFDGR 337

Query: 392 GKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVA 535
           G  +                +I C  + +   E ++SF+KNG+ L VA
Sbjct: 338 GLKAENGQFEEFGQTFGENDVIGCFANFET-EEVELSFSKNGEDLGVA 384


>sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein
           U-like protein 2 OS=Homo sapiens GN=HNRNPUL2 PE=1 SV=1
          Length = 747

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
 Frame = +2

Query: 47  ATNKRARLGSPPPSKRKPA--------LNSLDCNLDFTVESDGITGSALCNEGFAYCWSG 202
           A + R++   PP  + K          L++   +L F V  D   G  L +E F   WSG
Sbjct: 221 AYHSRSKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSG 280

Query: 203 ARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGY 382
           AR+T+GV  GK CF  +V +N  +    T   + +L RVG S  D     LGE   S+G+
Sbjct: 281 ARSTYGVTKGKVCFEAKVTQNLPMKEGCT---EVSLLRVGWS-VDFSRPQLGEDEFSYGF 336

Query: 383 GGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVA 535
            G G  +                +I C  + +   E ++SF+KNG+ L VA
Sbjct: 337 DGRGLKAENGQFEEFGQTFGENDVIGCFANFET-EEVELSFSKNGEDLGVA 386


>sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus
           gallus GN=DDX1 PE=1 SV=1
          Length = 740

 Score = 67.0 bits (162), Expect = 7e-11
 Identities = 48/147 (32%), Positives = 64/147 (43%)
 Frame = +2

Query: 104 LNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIME 283
           +N  D    F + SDG+     C       W G RAT GV  GKY +             
Sbjct: 93  MNPYDRGSAFAIGSDGLC----CQSREVKEWHGCRATRGVTKGKYYY------------- 135

Query: 284 DTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMC 463
           + +   Q LCRVG S   + +  LG     FG+GGTGK SH                I C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGC 194

Query: 464 AVDLDNPSEAKVSFAKNGKWLAVAVEF 544
            +D+D   + ++ F+KNGK L +A EF
Sbjct: 195 YLDID---KGQIKFSKNGKDLGLAFEF 218


>sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus
           tropicalis GN=ddx1 PE=2 SV=1
          Length = 740

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 47/149 (31%), Positives = 63/149 (42%)
 Frame = +2

Query: 104 LNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIME 283
           +N  D    F + SDG+     C       W G R+T GV  GKY +             
Sbjct: 93  MNPYDRGSSFAIGSDGLC----CQSREIKEWHGCRSTRGVNKGKYYY------------- 135

Query: 284 DTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMC 463
           + +   Q LCRVG S   + +  LG     FG+GGTGK SH                I C
Sbjct: 136 EVSCHDQGLCRVGWSTLQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194

Query: 464 AVDLDNPSEAKVSFAKNGKWLAVAVEFDA 550
            +D+DN     V ++KNGK L +A +  A
Sbjct: 195 YIDIDN---GTVKYSKNGKDLGLAFQIPA 220


>sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus
           laevis GN=ddx1 PE=2 SV=1
          Length = 740

 Score = 63.5 bits (153), Expect = 8e-10
 Identities = 47/152 (30%), Positives = 65/152 (42%)
 Frame = +2

Query: 104 LNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIME 283
           +N  D    F + SDG+     C       W G R+T GV  GKY +             
Sbjct: 93  MNPYDRGSAFAIGSDGLC----CQSREIKEWHGCRSTRGVNKGKYYY------------- 135

Query: 284 DTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMC 463
           + +   Q LCRVG S   + +  LG     FG+GGTGK SH                I C
Sbjct: 136 EVSCHDQGLCRVGWSTLSASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194

Query: 464 AVDLDNPSEAKVSFAKNGKWLAVAVEFDARRR 559
            +D+DN   + V F+KNGK L +A +  +  +
Sbjct: 195 YLDIDN---SIVKFSKNGKDLGLAFQIPSHMK 223


>sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus
           norvegicus GN=Ddx1 PE=2 SV=1
          Length = 740

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 47/149 (31%), Positives = 63/149 (42%)
 Frame = +2

Query: 104 LNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIME 283
           +N  D    F + SDG+     C       W G RAT G+  GK+ +             
Sbjct: 93  MNPYDRGSAFAIGSDGLC----CQSREVKEWHGCRATRGLLRGKHYY------------- 135

Query: 284 DTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMC 463
           + +   Q LCRVG S   + +  LG     FG+GGTGK SH                I C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194

Query: 464 AVDLDNPSEAKVSFAKNGKWLAVAVEFDA 550
            +D+D   +  V F+KNGK L +A E  A
Sbjct: 195 YLDID---KGHVKFSKNGKDLGLAFEIPA 220


>sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo
           abelii GN=DDX1 PE=2 SV=1
          Length = 740

 Score = 61.2 bits (147), Expect = 4e-09
 Identities = 46/146 (31%), Positives = 62/146 (42%)
 Frame = +2

Query: 104 LNSLDCNLDFTVESDGITGSALCNEGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIME 283
           +N  D    F + SDG+     C       W G RAT G+  GK+ +             
Sbjct: 93  MNPYDRGSAFAIGSDGLC----CQSREVKEWHGCRATKGLMKGKHYY------------- 135

Query: 284 DTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMC 463
           + +   Q LCRVG S   + +  LG     FG+GGTGK SH                I C
Sbjct: 136 EVSCHDQGLCRVGWSTMQASL-DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGC 194

Query: 464 AVDLDNPSEAKVSFAKNGKWLAVAVE 541
            +D+D   +  V F+KNGK L +A E
Sbjct: 195 YLDID---KGHVKFSKNGKDLGLAFE 217
tr_hit_id Q7XQR8
Definition tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa subsp. japonica
Align length 209
Score (bit) 195.0
E-value 2.0e-48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960337|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C08, 5'
         (615 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa ...   195   2e-48
tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subs...   195   2e-48
tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis...   194   3e-48
tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0...   193   8e-48
tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, who...   192   1e-47
tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U...   182   1e-44
tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U...   182   1e-44
tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza...   180   7e-44
tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein U...   104   5e-21
tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio ...   104   5e-21
tr|A4FUC2|A4FUC2_BOVIN HNRNPUL1 protein OS=Bos taurus GN=HNRNPUL...   103   8e-21
tr|B7Z4B8|B7Z4B8_HUMAN cDNA FLJ56481, highly similar to Heteroge...   103   8e-21
tr|B3KMW7|B3KMW7_HUMAN cDNA FLJ12801 fis, clone NT2RP2002099, hi...   103   8e-21
tr|A8K3W4|A8K3W4_HUMAN cDNA FLJ75163, highly similar to Homo sap...   103   8e-21
tr|A8K5K0|A8K5K0_HUMAN cDNA FLJ78309, highly similar to Homo sap...   102   1e-20
tr|A8K6U7|A8K6U7_HUMAN cDNA FLJ78252, highly similar to Homo sap...   100   7e-20
tr|Q4RFS1|Q4RFS1_TETNG Chromosome 16 SCAF15113, whole genome sho...    98   4e-19
tr|B6KKR9|B6KKR9_TOXGO SPRY domain-containing protein OS=Toxopla...    92   3e-17
tr|A7SN18|A7SN18_NEMVE Predicted protein (Fragment) OS=Nematoste...    89   3e-16
tr|B6M8E1|B6M8E1_BRAFL Putative uncharacterized protein OS=Branc...    87   8e-16
tr|B6M8C5|B6M8C5_BRAFL Putative uncharacterized protein OS=Branc...    87   1e-15
tr|B7P318|B7P318_IXOSC E1b-55kD-associated protein, putative (Fr...    85   4e-15
tr|Q4SGU2|Q4SGU2_TETNG Chromosome 14 SCAF14590, whole genome sho...    79   2e-13
tr|A7ST89|A7ST89_NEMVE Predicted protein (Fragment) OS=Nematoste...    79   2e-13
tr|B3MDS7|B3MDS7_DROAN GF11942 OS=Drosophila ananassae GN=GF1194...    78   5e-13
tr|Q5U5E2|Q5U5E2_XENLA Saf-A protein OS=Xenopus laevis GN=Saf-A ...    76   1e-12
tr|Q9YHY5|Q9YHY5_XENLA Scaffold attachment factor A OS=Xenopus l...    75   3e-12
tr|B3SC93|B3SC93_TRIAD Putative uncharacterized protein OS=Trich...    75   3e-12
tr|Q28Z53|Q28Z53_DROPS GA24297 OS=Drosophila pseudoobscura pseud...    75   4e-12
tr|B4GI97|B4GI97_DROPE GL16796 OS=Drosophila persimilis GN=GL167...    75   4e-12

>tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0043L09.29 PE=4 SV=2
          Length = 717

 Score =  195 bits (495), Expect = 2e-48
 Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 8/209 (3%)
 Frame = +2

Query: 11  APKKKQDAYDAGATNKRARLGSPPPSKRKPA---LNSLDCNLDFTVESDGITGSALCNEG 181
           +P+++++        KR R     P + +PA   LN  DC+LDF V   G+ G AL + G
Sbjct: 3   SPEREEEEAARSPPPKRPRRDGDAPPEPQPARVGLNPADCDLDFDVGGGGLRGEALHDGG 62

Query: 182 FAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLG 358
           FAYCWSGARAT GV+GG KYCFGC+V+  Q V MEDTA DQQ+LCRVG+SRG   VG+LG
Sbjct: 63  FAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALG 122

Query: 359 ESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAV 538
           E+  SFG+GGTGKFSH                ++CAVDLD+   A + F++NG+WL +A 
Sbjct: 123 ETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAK 182

Query: 539 EFDARRRGLDI----VWALDHHKAVFPHI 613
            FDA  +GL +    V ++    A+FPH+
Sbjct: 183 HFDASDKGLGLVESPVSSMQWESAIFPHV 211


>tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0636000 PE=4 SV=1
          Length = 717

 Score =  195 bits (495), Expect = 2e-48
 Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 8/209 (3%)
 Frame = +2

Query: 11  APKKKQDAYDAGATNKRARLGSPPPSKRKPA---LNSLDCNLDFTVESDGITGSALCNEG 181
           +P+++++        KR R     P + +PA   LN  DC+LDF V   G+ G AL + G
Sbjct: 3   SPEREEEEAARSPPPKRPRRDGDAPPEPQPARVGLNPADCDLDFDVGGGGLRGEALHDGG 62

Query: 182 FAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLG 358
           FAYCWSGARAT GV+GG KYCFGC+V+  Q V MEDTA DQQ+LCRVG+SRG   VG+LG
Sbjct: 63  FAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALG 122

Query: 359 ESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAV 538
           E+  SFG+GGTGKFSH                ++CAVDLD+   A + F++NG+WL +A 
Sbjct: 123 ETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAK 182

Query: 539 EFDARRRGLDI----VWALDHHKAVFPHI 613
            FDA  +GL +    V ++    A+FPH+
Sbjct: 183 HFDASDKGLGLVESPVSSMQWESAIFPHV 211


>tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016567 PE=4 SV=1
          Length = 1021

 Score =  194 bits (493), Expect = 3e-48
 Identities = 102/211 (48%), Positives = 131/211 (62%), Gaps = 8/211 (3%)
 Frame = +2

Query: 5   SMAPKKKQ--DAYDAGATNKRARLGSPPPSKRKP--ALNSLDCNLDFTVESDGITGSALC 172
           SMA  K+Q  +  +  +   +A L   P  K K    LN  DC+LDF +  DG+ GSAL 
Sbjct: 167 SMASIKRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALH 226

Query: 173 NEGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGS 352
           + GFAYCWSGAR   G+ GGKYCFGC++I  Q V MEDT  DQQ++CR+G+SRGD  VG+
Sbjct: 227 DHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGN 286

Query: 353 LGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAV 532
           LGE+  SFG+GGTGKFS                 I+CAV+L+    A +SF+KNGKWL V
Sbjct: 287 LGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGV 346

Query: 533 AVEFDARRRGLDIVWA----LDHHKAVFPHI 613
           A EFDA  +GL +V +    L    A+FPH+
Sbjct: 347 AKEFDAGVKGLGVVDSPMRQLHWESALFPHV 377


>tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa
           GN=H0410G08.12 PE=4 SV=1
          Length = 717

 Score =  193 bits (490), Expect = 8e-48
 Identities = 99/209 (47%), Positives = 131/209 (62%), Gaps = 8/209 (3%)
 Frame = +2

Query: 11  APKKKQDAYDAGATNKRARLGSPPPSKRKPA---LNSLDCNLDFTVESDGITGSALCNEG 181
           +P+ +++        KR R     P + +PA   LN  DC+LDF V   G+ G AL + G
Sbjct: 3   SPEWEEEEAARSPPPKRPRRDGDAPPEPQPARVGLNPADCDLDFDVGGGGLRGEALHDGG 62

Query: 182 FAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLG 358
           FAYCWSGARAT GV+GG KYCFGC+V+  Q V MEDTA DQQ+LCRVG+SRG   VG+LG
Sbjct: 63  FAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALG 122

Query: 359 ESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAV 538
           E+  SFG+GGTGKFSH                ++CAVDLD+   A + F++NG+WL +A 
Sbjct: 123 ETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAK 182

Query: 539 EFDARRRGLDI----VWALDHHKAVFPHI 613
            FDA  +GL +    V ++    A+FPH+
Sbjct: 183 HFDASDKGLGLVESPVSSMQWESAIFPHV 211


>tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009742001 PE=4 SV=1
          Length = 489

 Score =  192 bits (489), Expect = 1e-47
 Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 8/210 (3%)
 Frame = +2

Query: 8   MAPKKKQ--DAYDAGATNKRARLGSPPPSKRKP--ALNSLDCNLDFTVESDGITGSALCN 175
           MA  K+Q  +  +  +   +A L   P  K K    LN  DC+LDF +  DG+ GSAL +
Sbjct: 1   MASIKRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHD 60

Query: 176 EGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSL 355
            GFAYCWSGAR   G+ GGKYCFGC++I  Q V MEDT  DQQ++CR+G+SRGD  VG+L
Sbjct: 61  HGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNL 120

Query: 356 GESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVA 535
           GE+  SFG+GGTGKFS                 I+CAV+L+    A +SF+KNGKWL VA
Sbjct: 121 GETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVA 180

Query: 536 VEFDARRRGLDIVWA----LDHHKAVFPHI 613
            EFDA  +GL +V +    L    A+FPH+
Sbjct: 181 KEFDAGVKGLGVVDSPMRQLHWESALFPHV 210


>tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein
           U-like protein 1 OS=Zea mays PE=2 SV=1
          Length = 625

 Score =  182 bits (462), Expect = 1e-44
 Identities = 97/206 (47%), Positives = 125/206 (60%), Gaps = 11/206 (5%)
 Frame = +2

Query: 29  DAYDAGATNKRARLGSPP------PSKRKPALNSLDCNLDFTVESDGITGSALCNEGFAY 190
           D   A   +KR R  + P      PS R   LN  DC+LDF V   G+ GSAL   GFAY
Sbjct: 5   DDESAQPPSKRPRRDAEPEVDAAEPSPRV-VLNPADCDLDFDVGGGGLRGSALHEGGFAY 63

Query: 191 CWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESS 367
           CWSGARAT G +GG +YCFGCR++  Q V M+ T   +++LCR+G+SRGD  VG+LGES 
Sbjct: 64  CWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGALGESQ 123

Query: 368 TSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAVEFD 547
            SFG+GGTGKFSH                ++CAVDLD+   A + FA+NG+WL +A  FD
Sbjct: 124 HSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGIARHFD 183

Query: 548 ARRRGLDIVWA----LDHHKAVFPHI 613
           A  +GL +V A    +    A+FPH+
Sbjct: 184 AGEKGLGLVDAPLRPMRWGSALFPHV 209


>tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein
           U-like protein 1 OS=Zea mays PE=2 SV=1
          Length = 663

 Score =  182 bits (462), Expect = 1e-44
 Identities = 97/206 (47%), Positives = 125/206 (60%), Gaps = 11/206 (5%)
 Frame = +2

Query: 29  DAYDAGATNKRARLGSPP------PSKRKPALNSLDCNLDFTVESDGITGSALCNEGFAY 190
           D   A   +KR R  + P      PS R   LN  DC+LDF V   G+ GSAL   GFAY
Sbjct: 5   DDESAQPPSKRPRRDAEPEVDAAEPSPRV-VLNPADCDLDFDVGGGGLRGSALHEGGFAY 63

Query: 191 CWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESS 367
           CWSGARAT G +GG +YCFGCR++  Q V M+ T   +++LCR+G+SRGD  VG+LGES 
Sbjct: 64  CWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGALGESQ 123

Query: 368 TSFGYGGTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAVEFD 547
            SFG+GGTGKFSH                ++CAVDLD+   A + FA+NG+WL +A  FD
Sbjct: 124 HSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGIARHFD 183

Query: 548 ARRRGLDIVWA----LDHHKAVFPHI 613
           A  +GL +V A    +    A+FPH+
Sbjct: 184 AGEKGLGLVDAPLRPMRWGSALFPHV 209


>tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_015603 PE=4 SV=1
          Length = 745

 Score =  180 bits (456), Expect = 7e-44
 Identities = 99/237 (41%), Positives = 132/237 (55%), Gaps = 36/237 (15%)
 Frame = +2

Query: 11  APKKKQDAYDAGATNKRARLGSPPPSKRKPA---LNSLDCNL------------------ 127
           +P+++++        KR R     P + +PA   LN  DC+L                  
Sbjct: 3   SPEREEEEAARSPPPKRPRRDGDAPPEPQPARVGLNPADCDLGTHGSSFAGCNRSRALLT 62

Query: 128 ----------DFTVESDGITGSALCNEGFAYCWSGARATFGVKGG-KYCFGCRVIENQQV 274
                     DF V   G+ G AL + GFAYCWSGARAT GV+GG KYCFGC+V+  Q V
Sbjct: 63  TPSSVAVWRPDFDVGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCKVVAEQAV 122

Query: 275 IMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXXI 454
            MEDTA DQQ+LCRVG+SRG   VG+LGE+  SFG+GGTGKFSH                
Sbjct: 123 EMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDT 182

Query: 455 IMCAVDLDNPSEAKVSFAKNGKWLAVAVEFDARRRGLDI----VWALDHHKAVFPHI 613
           ++CAVDLD+   A + F++NG+WL +A  FDA  +GL +    V ++    A+FPH+
Sbjct: 183 VVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAIFPHV 239


>tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein
           U-like 1 OS=Danio rerio GN=hnrnpul1 PE=2 SV=1
          Length = 784

 Score =  104 bits (259), Expect = 5e-21
 Identities = 69/196 (35%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
 Frame = +2

Query: 53  NKRARLGSPPPSKRKP---------ALNSLDCNLDFTVESDGITGSALCNEGFAYCWSGA 205
           +KR+R  SP PS  +          A+++ + +L F V  D  +G  L  EGFAY WSGA
Sbjct: 179 DKRSR--SPQPSAEEDDEDFDDTLVAIDTYNSDLHFKVSPDHCSGYPLTIEGFAYLWSGA 236

Query: 206 RATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYG 385
           RAT+GV  G+ C+  +V E   V    +++   ++ RVG S  DS    LGE + S+GYG
Sbjct: 237 RATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHVVRVGWSL-DSCSTQLGEEAFSYGYG 295

Query: 386 GTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAVEFDARRRGL 565
           GTGK S                II C +D D+  + +++F+KNGKWL VA          
Sbjct: 296 GTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVEMAFSKNGKWLDVAFRVSKEELA- 354

Query: 566 DIVWALDHHKAVFPHI 613
                    +A+FPH+
Sbjct: 355 --------GQALFPHV 362


>tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio
           GN=hnrnpul1 PE=1 SV=1
          Length = 784

 Score =  104 bits (259), Expect = 5e-21
 Identities = 69/196 (35%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
 Frame = +2

Query: 53  NKRARLGSPPPSKRKP---------ALNSLDCNLDFTVESDGITGSALCNEGFAYCWSGA 205
           +KR+R  SP PS  +          A+++ + +L F V  D  +G  L  EGFAY WSGA
Sbjct: 179 DKRSR--SPQPSAEEDDEDFDDTLVAIDTYNSDLHFKVSPDHCSGYPLTIEGFAYLWSGA 236

Query: 206 RATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYG 385
           RAT+GV  G+ C+  +V E   V    +++   ++ RVG S  DS    LGE + S+GYG
Sbjct: 237 RATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHVVRVGWSL-DSCSTQLGEEAFSYGYG 295

Query: 386 GTGKFSHXXXXXXXXXXXXXXXIIMCAVDLDNPSEAKVSFAKNGKWLAVAVEFDARRRGL 565
           GTGK S                II C +D D+  + +++F+KNGKWL VA          
Sbjct: 296 GTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVEMAFSKNGKWLDVAFRVSKEELA- 354

Query: 566 DIVWALDHHKAVFPHI 613
                    +A+FPH+
Sbjct: 355 --------GQALFPHV 362