DK960343 |
Clone id |
TST39A01NGRL0007_C15 |
Library |
TST39 |
Length |
659 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C15. 5' end sequence. |
Accession |
DK960343 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3202Contig1 |
Sequence |
GTCGCAACCAGTCGAGAGAAGAGAGACAGCGAGGCGCACACCTCGTGACTAGAGATGGAA ATGGGAGAGCAGGAGAAGGAGGTCCAGTACAATGCCCAGGGGAAGCGGAAGGGCAAGCAC GACAAACCCAAACCTTGGGACACTCCCGATATCGACCACTGGAAAGTAGAGCCGTTTCAG CCTACTTGGAATGAAGGCGGCCTTTTAGAAGAGAGCTCCTTCTGCACGCTCTTCCCGCAG TATAGAGAAAAGTACTTGCAGGACGTCTGGCCCGTGGTCACAAAGACTTTAAAAGAGCAT GGCATAGCTTGTAATCTAAATCTAGTTGAGGGTTCGATGACTGTCTCAACCACTCGGAAA ACACGTGATCCTTACATCATCATCAAAGCACGTGATCTTATTAAGCTTCTGTCTCGAAGC GTCCCTGCTCCTCAGGCCTTGAAGATACTAGATGATGAGATGCAATGTGACATAATCAAG ATTGGGAATATGATCCGAAATAAGGAAAGATTTGTGAAAAGAAGGCAAAGATTGCTAGGG CCAAATGGGGCAACATTGAAGGCAATAGAGCTTTTGACTGGCTGCTACATGCTGGTGCAG GGGAATACTGTGGCTGCAATGGGGTCTTTTAAGGGGCTTAAAGCAGTTCGACGTATTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O74777 |
Definition |
sp|O74777|MIS3_SCHPO Ribosomal RNA assembly protein mis3 OS=Schizosaccharomyces pombe |
Align length |
199 |
Score (bit) |
265.0 |
E-value |
2.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960343|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C15, 5' (659 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O74777|MIS3_SCHPO Ribosomal RNA assembly protein mis3 OS=Schi... 265 2e-70 sp|P25586|KRR1_YEAST Ribosomal RNA assembly protein KRR1 OS=Sacc... 258 1e-68 sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component hom... 234 4e-61 sp|Q8BGA5|KRR1_MOUSE KRR1 small subunit processome component hom... 229 1e-59 sp|Q3B7L9|KRR1_BOVIN KRR1 small subunit processome component hom... 226 8e-59 sp|Q54UU6|KRR1_DICDI KRR1 small subunit processome component hom... 220 5e-57 sp|Q57885|Y443_METJA KH domain-containing protein MJ0443 OS=Meth... 68 4e-11 sp|Q4WNG7|PNO1_ASPFU Pre-rRNA-processing protein pno1 OS=Aspergi... 52 2e-06 sp|Q1DQZ5|PNO1_COCIM Pre-rRNA-processing protein PNO1 OS=Coccidi... 44 6e-04 sp|Q0UWT7|PNO1_PHANO Pre-rRNA-processing protein PNO1 OS=Phaeosp... 44 8e-04 sp|Q99216|PNO1_YEAST Pre-rRNA-processing protein PNO1 OS=Sacchar... 40 0.014 sp|Q6BJ75|PNO1_DEBHA Pre-rRNA-processing protein PNO1 OS=Debaryo... 39 0.019 sp|Q5ACM4|PNO1_CANAL Pre-rRNA-processing protein PNO1 OS=Candida... 39 0.019 sp|Q4IN63|PNO1_GIBZE Pre-rRNA-processing protein PNO1 OS=Gibbere... 38 0.054 sp|Q6CUA5|PNO1_KLULA Pre-rRNA-processing protein PNO1 OS=Kluyver... 35 0.35 sp|Q753C6|PNO1_ASHGO Pre-rRNA-processing protein PNO1 OS=Ashbya ... 35 0.35 sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4... 35 0.35 sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=... 33 1.3 sp|Q6FMB3|PNO1_CANGA Pre-rRNA-processing protein PNO1 OS=Candida... 33 1.3 sp|Q03610|YN81_CAEEL Uncharacterized protein ZC84.1 OS=Caenorhab... 33 1.7 sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=... 33 1.7 sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE... 33 1.7 sp|Q5T871|LELP1_HUMAN Late cornified envelope-like proline-rich ... 33 1.7 sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE... 32 2.3 sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1 32 2.3 sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 ... 32 2.3 sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 ... 32 2.3 sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=... 32 2.3 sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis silvestris catus GN... 32 2.3 sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2... 32 2.3
>sp|O74777|MIS3_SCHPO Ribosomal RNA assembly protein mis3 OS=Schizosaccharomyces pombe GN=mis3 PE=2 SV=1 Length = 327
Score = 265 bits (677), Expect = 2e-70 Identities = 130/199 (65%), Positives = 155/199 (77%) Frame = +1
Query: 61 MGEQEKEVQYNAQGKRKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQ 240 M E E + N + ++ + KPWDT DIDHWK+EPF ++ LEESSF TLFP+ Sbjct: 1 MTEVESSTENNVIVNKNKRYRRDKPWDTDDIDHWKIEPFTKDDSKESFLEESSFATLFPK 60
Query: 241 YREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRS 420 YREKYL++VWP VT+ L + GI C L+LVEGSMTV TTRKT DPY I+ ARDLIKLL+RS Sbjct: 61 YREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARS 120
Query: 421 VPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQ 600 VP PQA+KI+ D + CDIIKIGN++RNKERFVKRRQRL+G NG TLKA+ELLT CY+LVQ Sbjct: 121 VPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQ 180
Query: 601 GNTVAAMGSFKGLKAVRRI 657 G TVA MG +KGLK VRRI Sbjct: 181 GTTVAVMGGYKGLKEVRRI 199
>sp|P25586|KRR1_YEAST Ribosomal RNA assembly protein KRR1 OS=Saccharomyces cerevisiae GN=KRR1 PE=1 SV=1 Length = 316
Score = 258 bits (660), Expect = 1e-68 Identities = 127/182 (69%), Positives = 148/182 (81%), Gaps = 2/182 (1%) Frame = +1
Query: 118 HDKPKPWDTPDIDHWKVEPFQPTWNEGG--LLEESSFCTLFPQYREKYLQDVWPVVTKTL 291 H++ KPWDT DID WK+E F+ N G EESSF TLFP+YRE YL+ +W VT+ L Sbjct: 5 HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64
Query: 292 KEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILDDEMQCD 471 +H IAC L+LVEGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M CD Sbjct: 65 DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124
Query: 472 IIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFKGLKAVR 651 +IKIGN + NKERFVKRRQRL+GPNG TLKA+ELLT CY+LVQGNTV+AMG FKGLK VR Sbjct: 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184
Query: 652 RI 657 R+ Sbjct: 185 RV 186
>sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component homolog OS=Homo sapiens GN=KRR1 PE=1 SV=4 Length = 381
Score = 234 bits (596), Expect = 4e-61 Identities = 116/192 (60%), Positives = 147/192 (76%), Gaps = 6/192 (3%) Frame = +1
Query: 100 GKRKGKHDKPKPWDTPDI------DHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQ 261 GK + ++ KPKP + + D WK F N GLLEESSF TLFP+YRE YL+ Sbjct: 14 GKSEFRNQKPKPENQDESELLTVPDGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLK 73
Query: 262 DVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQAL 441 + WP+V K L EH + L+L+EGSMTV TT+KT DPYIII+ARDLIKLL+RSV QA+ Sbjct: 74 ECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAV 133
Query: 442 KILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAM 621 +IL D++ CDIIKIG+++RNKERFVKRRQRL+GP G+TLKA+ELLT CY++VQGNTV+A+ Sbjct: 134 RILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAI 193
Query: 622 GSFKGLKAVRRI 657 G F GLK VR++ Sbjct: 194 GPFSGLKEVRKV 205
>sp|Q8BGA5|KRR1_MOUSE KRR1 small subunit processome component homolog OS=Mus musculus GN=Krr1 PE=2 SV=1 Length = 380
Score = 229 bits (583), Expect = 1e-59 Identities = 110/168 (65%), Positives = 136/168 (80%) Frame = +1
Query: 154 DHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEG 333 D WK F N GLLEESSF TLFP+YRE YL++ WP+V K L EH + L+L+EG Sbjct: 37 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEG 96
Query: 334 SMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERF 513 SMTV TT+KT DPYIII+ARDLIKLL+RSV QA++IL D++ CDIIKIG+++RNKERF Sbjct: 97 SMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERF 156
Query: 514 VKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFKGLKAVRRI 657 VKRRQRL+GP G+TLKA+ELLT CY++VQGNTV+A+G F GLK VR++ Sbjct: 157 VKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKV 204
>sp|Q3B7L9|KRR1_BOVIN KRR1 small subunit processome component homolog OS=Bos taurus GN=KRR1 PE=2 SV=1 Length = 382
Score = 226 bits (576), Expect = 8e-59 Identities = 116/205 (56%), Positives = 147/205 (71%), Gaps = 6/205 (2%) Frame = +1
Query: 61 MGEQEKEVQYNAQGKRKGKHDKPKPWDTPDI------DHWKVEPFQPTWNEGGLLEESSF 222 M ++ A GK + + KP + + D WK F N GLLEESSF Sbjct: 1 MASSKQNGPTTASGKSELRSPKPTSENRDESELLTVPDGWKEPAFSKEDNPRGLLEESSF 60
Query: 223 CTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLI 402 TLFP+YRE YL++ WP+V K L EH I L+L+EGSMTV TT+KT DPYIII+ARDLI Sbjct: 61 ATLFPKYREAYLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPYIIIRARDLI 120
Query: 403 KLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTG 582 KLL+RSV QA++IL D++ CDIIKIG+++RNKERFVKRRQRL+GP G+TLKA+ELLT Sbjct: 121 KLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTN 180
Query: 583 CYMLVQGNTVAAMGSFKGLKAVRRI 657 CY++VQGNTV+A+G F LK VR++ Sbjct: 181 CYIMVQGNTVSAIGPFSVLKEVRKV 205
>sp|Q54UU6|KRR1_DICDI KRR1 small subunit processome component homolog OS=Dictyostelium discoideum GN=krr1 PE=3 SV=1 Length = 374
Score = 220 bits (561), Expect = 5e-57 Identities = 116/207 (56%), Positives = 153/207 (73%), Gaps = 8/207 (3%) Frame = +1
Query: 61 MGEQEK-EVQYNAQGKRKGKHDKPKPWDTPDI----DHWKVEPFQPTWNEGG---LLEES 216 MG+++K E++ + K K ++ K K + +I D WK P + ++ G L ++S Sbjct: 1 MGKKDKTEIKVEEENKEKKQYKKKKEREELEIPKGIDPWK--PLELKRDDVGKRVLYDDS 58
Query: 217 SFCTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARD 396 SF TLFP+YREKYLQ++W +V L EHGI C L+L+EGSMTV+TT+K DP I+KARD Sbjct: 59 SFATLFPKYREKYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARD 118
Query: 397 LIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELL 576 LIKLLSRSVP A K+L+D+ CDIIKIG +RNKERFVKRRQRL+GP+G+TLKAIELL Sbjct: 119 LIKLLSRSVPFEHAQKVLNDDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLKAIELL 178
Query: 577 TGCYMLVQGNTVAAMGSFKGLKAVRRI 657 T CY+LVQGNTV+++G + GL VR+I Sbjct: 179 TKCYVLVQGNTVSSIGPWNGLVQVRKI 205
>sp|Q57885|Y443_METJA KH domain-containing protein MJ0443 OS=Methanocaldococcus jannaschii GN=MJ0443 PE=4 SV=1 Length = 227
Score = 68.2 bits (165), Expect = 4e-11 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 1/126 (0%) Frame = +1
Query: 277 VTKTL-KEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILD 453 V KT+ KE G+ ++ +G++T+ T K +DP + KARD+++ + R ALK++ Sbjct: 36 VKKTIEKELGVKLEID-ADGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVS 94
Query: 454 DEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFK 633 DE ++I I + + + + R++G G + + IE LTG + V GNTVA +G + Sbjct: 95 DEYVLEVIDIEDYASSDNSIRRLKGRVIGKEGKSRRYIESLTGANVSVYGNTVAIVGEHE 154
Query: 634 GLKAVR 651 ++ + Sbjct: 155 PVQIAK 160
>sp|Q4WNG7|PNO1_ASPFU Pre-rRNA-processing protein pno1 OS=Aspergillus fumigatus GN=pno1 PE=3 SV=1 Length = 252
Score = 52.4 bits (124), Expect = 2e-06 Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 11/204 (5%) Frame = +1
Query: 61 MGEQEKEVQYNAQGKRKGKHDKPKPWDTPDIDHWKVE-------PFQPTWNEGGLLEESS 219 + +E + +++ + G+ + P P T H + F P + G +L + Sbjct: 15 LSAEEPSLTFSSDAQASGQGEAPSPIPTESAQHSDMRIDEESRPVFTPITDAGTVLRVET 74
Query: 220 FCTLFPQYREKYLQDVWPVVTKTLKEH-GIACNLNLVEGSMTVSTTRKTRDPYIIIKARD 396 P +R L+ WP + L EH + +N+ ++ + T++ T D + K D Sbjct: 75 RKVPVPPHRMTPLKANWPKIYPPLVEHLKLQVRMNIKNRAVELRTSKFTTDTGALQKGED 134
Query: 397 LIKLLSRSVPAPQALKILD-DEMQCDIIKIGNMIR--NKERFVKRRQRLLGPNGATLKAI 567 +K + A+ +L D++ +I ++ N E + R+ G +G T AI Sbjct: 135 FVKAFTLGFDVDDAIALLRLDDLYIRSFEIRDVKASLNGEHLSRAIGRIAGKDGKTKFAI 194
Query: 568 ELLTGCYMLVQGNTVAAMGSFKGL 639 E + +++QG V +G F+ L Sbjct: 195 ENASRTRVVLQGTKVTILGRFRDL 218
>sp|Q1DQZ5|PNO1_COCIM Pre-rRNA-processing protein PNO1 OS=Coccidioides immitis GN=PNO1 PE=3 SV=1 Length = 255
Score = 44.3 bits (103), Expect = 6e-04 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 3/142 (2%) Frame = +1
Query: 235 PQYREKYLQDVWPVVTKTLKEH-GIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLL 411 P +R L+ WP + L EH + +N+ ++ + T++ T D + K D IK Sbjct: 84 PPHRMSPLKAAWPKIYPPLVEHLKLQVRMNIKSKAVELRTSKNTTDTGALQKGEDFIKAF 143
Query: 412 SRSVPAPQALKILD-DEMQCDIIKIGNMIR-NKERFVKRRQRLLGPNGATLKAIELLTGC 585 + A+ +L D++ + +I ++ N E + R+ G +G T AIE + Sbjct: 144 TLGFDVDDAIALLRLDDLYIETFEIKDVKPLNGEHLGRAIGRIAGKDGKTKFAIENASRT 203
Query: 586 YMLVQGNTVAAMGSFKGLKAVR 651 +++ + +G F+ ++ R Sbjct: 204 RVVLADQKIHILGGFRNIRIAR 225
>sp|Q0UWT7|PNO1_PHANO Pre-rRNA-processing protein PNO1 OS=Phaeosphaeria nodorum GN=PNO1 PE=3 SV=1 Length = 262
Score = 43.9 bits (102), Expect = 8e-04 Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 3/142 (2%) Frame = +1
Query: 235 PQYREKYLQDVWPVVTKTLKEH-GIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLL 411 P +R L+ WP + L EH + +N+ S+ + T++ T D + K D +K Sbjct: 91 PPHRMTPLKTAWPKIYPPLVEHLKLQVRMNIKTKSVELRTSKSTTDTGALQKGEDFVKAF 150
Query: 412 SRSVPAPQALKILD-DEMQCDIIKIGNM-IRNKERFVKRRQRLLGPNGATLKAIELLTGC 585 + A+ +L D++ + +I ++ E + R+ G +G T AIE + Sbjct: 151 TLGFDVDDAIALLRLDDLYIETFEIKDVKTLQGEHMGRAIGRIAGKDGKTKFAIENASRT 210
Query: 586 YMLVQGNTVAAMGSFKGLKAVR 651 +++ + + +G FK + R Sbjct: 211 RVVLADSKIHILGGFKNIHVAR 232
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SPQ0 |
Definition |
tr|A9SPQ0|A9SPQ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
208 |
Score (bit) |
321.0 |
E-value |
3.0e-86 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960343|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C15, 5' (659 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SPQ0|A9SPQ0_PHYPA Predicted protein OS=Physcomitrella paten... 321 3e-86 tr|Q7XDT2|Q7XDT2_ORYSJ Os10g0452800 protein OS=Oryza sativa subs... 316 7e-85 tr|B8BH83|B8BH83_ORYSI Putative uncharacterized protein OS=Oryza... 316 7e-85 tr|A7QW68|A7QW68_VITVI Chromosome chr3 scaffold_199, whole genom... 305 2e-81 tr|Q9FT93|Q9FT93_ARATH Rev interacting protein mis3-like OS=Arab... 303 6e-81 tr|Q8LBT7|Q8LBT7_ARATH Rev interacting protein mis3-like OS=Arab... 303 6e-81 tr|Q014E9|Q014E9_OSTTA RRNA processing protein (ISS) OS=Ostreoco... 287 5e-76 tr|A4S0U1|A4S0U1_OSTLU Predicted protein OS=Ostreococcus lucimar... 286 8e-76 tr|Q5N8D1|Q5N8D1_ORYSJ Rev protein (42.9 kD)-like (Putative unch... 284 4e-75 tr|A2WUE2|A2WUE2_ORYSI Putative uncharacterized protein OS=Oryza... 284 4e-75 tr|B6JW85|B6JW85_SCHJP Ribosomal RNA assembly protein mis3 OS=Sc... 275 2e-72 tr|A8PX84|A8PX84_MALGO Putative uncharacterized protein OS=Malas... 273 9e-72 tr|B6KBZ5|B6KBZ5_TOXGO Ribosomal RNA assembly protein, putative ... 271 2e-71 tr|Q4P9H2|Q4P9H2_USTMA Putative uncharacterized protein OS=Ustil... 269 1e-70 tr|B8C0X8|B8C0X8_THAPS Putative uncharacterized protein OS=Thala... 267 4e-70 tr|Q1DNC9|Q1DNC9_COCIM Putative uncharacterized protein OS=Cocci... 267 5e-70 tr|Q0CXZ3|Q0CXZ3_ASPTN Ribosomal RNA assembly protein mis3 OS=As... 267 5e-70 tr|Q5B0Q5|Q5B0Q5_EMENI Putative uncharacterized protein OS=Emeri... 266 1e-69 tr|A1C6I1|A1C6I1_ASPCL rRNA assembly protein Mis3, putative OS=A... 265 1e-69 tr|A5DJ53|A5DJ53_PICGU Putative uncharacterized protein OS=Pichi... 264 4e-69 tr|A7TFC5|A7TFC5_VANPO Putative uncharacterized protein OS=Vande... 263 7e-69 tr|A8IKA1|A8IKA1_CHLRE Predicted protein (Fragment) OS=Chlamydom... 262 1e-68 tr|Q4X132|Q4X132_ASPFU RRNA assembly protein Mis3, putative OS=A... 262 1e-68 tr|B0XSG8|B0XSG8_ASPFC rRNA assembly protein Mis3, putative OS=A... 262 1e-68 tr|A1DH53|A1DH53_NEOFI RRNA assembly protein Mis3, putative OS=N... 262 1e-68 tr|B7FXP7|B7FXP7_PHATR Predicted protein OS=Phaeodactylum tricor... 261 2e-68 tr|B6H6H3|B6H6H3_PENCH Pc15g00270 protein OS=Penicillium chrysog... 260 5e-68 tr|B3RLB7|B3RLB7_TRIAD Putative uncharacterized protein OS=Trich... 260 6e-68 tr|Q6CV23|Q6CV23_KLULA KLLA0C00506p OS=Kluyveromyces lactis GN=K... 260 6e-68 tr|B8M3R6|B8M3R6_9EURO rRNA assembly protein Mis3, putative OS=T... 259 1e-67
>tr|A9SPQ0|A9SPQ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_133145 PE=4 SV=1 Length = 345
Score = 321 bits (822), Expect = 3e-86 Identities = 157/208 (75%), Positives = 182/208 (87%), Gaps = 7/208 (3%) Frame = +1
Query: 55 MEMGEQEKEV----QYNAQGKR---KGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEE 213 +E E KEV + GK+ KGKHDKPKPWDT DI+HWK+E F P++NEGG+LEE Sbjct: 4 LERDEDTKEVAPELEIEVTGKKPKHKGKHDKPKPWDTDDIEHWKLEKFDPSFNEGGMLEE 63
Query: 214 SSFCTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKAR 393 SSF TLFP YREKYL++ WPV+T+ LKEHGI L+LV+GSMTVSTTRKTRDPYII+KAR Sbjct: 64 SSFATLFPAYREKYLRETWPVITQALKEHGIKAVLDLVKGSMTVSTTRKTRDPYIIMKAR 123
Query: 394 DLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIEL 573 DL+KLLSRSVPAPQALKIL+D+MQCDIIKIGN+IRNKERFVKRRQRLLGPNGATLKA+EL Sbjct: 124 DLMKLLSRSVPAPQALKILEDDMQCDIIKIGNLIRNKERFVKRRQRLLGPNGATLKALEL 183
Query: 574 LTGCYMLVQGNTVAAMGSFKGLKAVRRI 657 LTGCY+LVQG+TV+AMG +KGLKAVRR+ Sbjct: 184 LTGCYVLVQGSTVSAMGPWKGLKAVRRV 211
>tr|Q7XDT2|Q7XDT2_ORYSJ Os10g0452800 protein OS=Oryza sativa subsp. japonica GN=Os10g0452800 PE=2 SV=1 Length = 395
Score = 316 bits (810), Expect = 7e-85 Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 1/203 (0%) Frame = +1
Query: 52 EMEMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCT 228 E +EV + KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE SSF T Sbjct: 8 EANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFST 67
Query: 229 LFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKL 408 LFPQYREKYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKTRDPYII+KA++LIKL Sbjct: 68 LFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIKL 127
Query: 409 LSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCY 588 LSRSVPAPQA+KIL+DEM CDIIKIG++IRNKERFVKRR+RLLGPN +TLKAIE+LTGCY Sbjct: 128 LSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCY 187
Query: 589 MLVQGNTVAAMGSFKGLKAVRRI 657 +LVQGNTVAAMGS+KGLK VRR+ Sbjct: 188 ILVQGNTVAAMGSWKGLKQVRRV 210
>tr|B8BH83|B8BH83_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33853 PE=4 SV=1 Length = 395
Score = 316 bits (810), Expect = 7e-85 Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 1/203 (0%) Frame = +1
Query: 52 EMEMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCT 228 E +EV + KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE SSF T Sbjct: 8 EANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFST 67
Query: 229 LFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKL 408 LFPQYREKYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKTRDPYII+KA++LIKL Sbjct: 68 LFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIKL 127
Query: 409 LSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCY 588 LSRSVPAPQA+KIL+DEM CDIIKIG++IRNKERFVKRR+RLLGPN +TLKAIE+LTGCY Sbjct: 128 LSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCY 187
Query: 589 MLVQGNTVAAMGSFKGLKAVRRI 657 +LVQGNTVAAMGS+KGLK VRR+ Sbjct: 188 ILVQGNTVAAMGSWKGLKQVRRV 210
>tr|A7QW68|A7QW68_VITVI Chromosome chr3 scaffold_199, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007719001 PE=4 SV=1 Length = 387
Score = 305 bits (780), Expect = 2e-81 Identities = 149/202 (73%), Positives = 168/202 (83%), Gaps = 1/202 (0%) Frame = +1
Query: 55 MEMGEQEKEVQYNAQGKRKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLF 234 ME E EV+ + K KGKHDKPKPWD P IDHWKV+ F P+WNEGG+LE SSF TLF Sbjct: 1 MEESNGEVEVERKEKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSFSTLF 60
Query: 235 PQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLS 414 PQYREKYLQ+ WP V LKE G+ LNLVEG MTVSTTRKTRDPYII+KARDLIKLLS Sbjct: 61 PQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIKLLS 120
Query: 415 RSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYML 594 RSVPAPQA+KIL+DEMQCDIIKIG+++RNKERFVKRRQ L+ G +L A+E+LTGCY+L Sbjct: 121 RSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLIPLFGVSLTALEILTGCYIL 180
Query: 595 V-QGNTVAAMGSFKGLKAVRRI 657 V QGNTVAAMGSFKGLK VRR+ Sbjct: 181 VQQGNTVAAMGSFKGLKQVRRV 202
>tr|Q9FT93|Q9FT93_ARATH Rev interacting protein mis3-like OS=Arabidopsis thaliana GN=F8L15_150 PE=2 SV=1 Length = 391
Score = 303 bits (776), Expect = 6e-81 Identities = 144/201 (71%), Positives = 172/201 (85%), Gaps = 1/201 (0%) Frame = +1
Query: 58 EMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLF 234 E+ +E+ ++ + K+KGKH+KPKPWD P+ID W +E F P WN G+ E S+F TLF Sbjct: 6 EIAHEEQNIE--KREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLF 63
Query: 235 PQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLS 414 PQYREKYLQ+ WP V LKE+G+AC LNLVEGSMTVSTTRKTRDPYII+KARDLIKLLS Sbjct: 64 PQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLS 123
Query: 415 RSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYML 594 RSVPAPQA+KIL+DE+QCDIIKIGN++RNKERFVKRRQRL+GPN +TLKA+E+LT CY+L Sbjct: 124 RSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYIL 183
Query: 595 VQGNTVAAMGSFKGLKAVRRI 657 VQG+TVAAMG FKGLK +RRI Sbjct: 184 VQGSTVAAMGPFKGLKQLRRI 204
>tr|Q8LBT7|Q8LBT7_ARATH Rev interacting protein mis3-like OS=Arabidopsis thaliana PE=2 SV=1 Length = 391
Score = 303 bits (776), Expect = 6e-81 Identities = 144/201 (71%), Positives = 172/201 (85%), Gaps = 1/201 (0%) Frame = +1
Query: 58 EMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLF 234 E+ +E+ ++ + K+KGKH+KPKPWD P+ID W +E F P WN G+ E S+F TLF Sbjct: 6 EIAHEEQNIE--KREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLF 63
Query: 235 PQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLS 414 PQYREKYLQ+ WP V LKE+G+AC LNLVEGSMTVSTTRKTRDPYII+KARDLIKLLS Sbjct: 64 PQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLS 123
Query: 415 RSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYML 594 RSVPAPQA+KIL+DE+QCDIIKIGN++RNKERFVKRRQRL+GPN +TLKA+E+LT CY+L Sbjct: 124 RSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYIL 183
Query: 595 VQGNTVAAMGSFKGLKAVRRI 657 VQG+TVAAMG FKGLK +RRI Sbjct: 184 VQGSTVAAMGPFKGLKQLRRI 204
>tr|Q014E9|Q014E9_OSTTA RRNA processing protein (ISS) OS=Ostreococcus tauri GN=Ot07g04570 PE=4 SV=1 Length = 419
Score = 287 bits (734), Expect = 5e-76 Identities = 134/184 (72%), Positives = 159/184 (86%) Frame = +1
Query: 106 RKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQDVWPVVTK 285 +KG++ + KPWD IDHW+V+PF N G+LEESSF LFP+YREKYL++VWP VT+ Sbjct: 41 KKGRYRRDKPWDHDGIDHWRVDPFTAEDNPHGVLEESSFAVLFPKYREKYLREVWPSVTR 100
Query: 286 TLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILDDEMQ 465 LKE G++C LNLVEGSMTV TTRKT DPYII+KARDLIKLLSRSVPAPQALK+LDD+ Sbjct: 101 ALKEQGVSCELNLVEGSMTVRTTRKTFDPYIIVKARDLIKLLSRSVPAPQALKVLDDDTN 160
Query: 466 CDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFKGLKA 645 CD+IKIG M+RNKERFVKRRQRL+GPNG+TLKAIE+LTGCY+LVQGNTV+ MG +KGLK Sbjct: 161 CDVIKIGGMVRNKERFVKRRQRLIGPNGSTLKAIEMLTGCYVLVQGNTVSVMGGWKGLKT 220
Query: 646 VRRI 657 VR+I Sbjct: 221 VRKI 224
>tr|A4S0U1|A4S0U1_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_32864 PE=4 SV=1 Length = 415
Score = 286 bits (732), Expect = 8e-76 Identities = 135/188 (71%), Positives = 158/188 (84%) Frame = +1
Query: 94 AQGKRKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQDVWP 273 + G +KG++ + KPWD IDHW V PF N G+LEESSF LFP+YREKYL++ WP Sbjct: 36 SSGAKKGRYRRDKPWDHDGIDHWSVTPFTAEDNPNGVLEESSFAVLFPKYREKYLRETWP 95
Query: 274 VVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILD 453 VTK LKE G++C LNLVEGSMTV TTRKT DPYII+KARDLIKLLSRSVPAPQALK+L+ Sbjct: 96 SVTKALKEQGVSCELNLVEGSMTVRTTRKTFDPYIIMKARDLIKLLSRSVPAPQALKVLE 155
Query: 454 DEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFK 633 DE CD+IKIG M+RNKERFVKRRQRL+GPNG+TLKAIE+LTGCY+LVQGNTV+ MG +K Sbjct: 156 DETNCDVIKIGGMVRNKERFVKRRQRLIGPNGSTLKAIEMLTGCYVLVQGNTVSVMGGWK 215
Query: 634 GLKAVRRI 657 GLK VR+I Sbjct: 216 GLKMVRKI 223
>tr|Q5N8D1|Q5N8D1_ORYSJ Rev protein (42.9 kD)-like (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=B1142C05.33 PE=4 SV=1 Length = 421
Score = 284 bits (726), Expect = 4e-75 Identities = 143/214 (66%), Positives = 164/214 (76%), Gaps = 29/214 (13%) Frame = +1
Query: 103 KRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYR----------- 246 + KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE +SF TLFPQYR Sbjct: 20 RHKGKHDKPKPWDDDPNIDHWKIEEFDPSWNEGGMLEVTSFSTLFPQYRGKSPHPTPPSA 79
Query: 247 -----------------EKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPY 375 +KYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKT+DPY Sbjct: 80 LSWFLPRSAIDWFCLVVKKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPY 139
Query: 376 IIIKARDLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGAT 555 IIIKA +LIKLLSRSVPAPQA+KIL+DEM C IIKIG++IRNKERFVKRR RLLGPN +T Sbjct: 140 IIIKANELIKLLSRSVPAPQAIKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGPNLST 199
Query: 556 LKAIELLTGCYMLVQGNTVAAMGSFKGLKAVRRI 657 LKAIE+LTGCY+LVQGNT AAMG +KGLK V R+ Sbjct: 200 LKAIEILTGCYILVQGNTAAAMGYWKGLKQVVRV 233
>tr|A2WUE2|A2WUE2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03494 PE=4 SV=1 Length = 421
Score = 284 bits (726), Expect = 4e-75 Identities = 143/214 (66%), Positives = 164/214 (76%), Gaps = 29/214 (13%) Frame = +1
Query: 103 KRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYR----------- 246 + KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE +SF TLFPQYR Sbjct: 20 RHKGKHDKPKPWDDDPNIDHWKIEEFDPSWNEGGMLEVTSFSTLFPQYRGKSPHPTPPSA 79
Query: 247 -----------------EKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPY 375 +KYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKT+DPY Sbjct: 80 LSWFLPRSAIDWFCLVVKKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPY 139
Query: 376 IIIKARDLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGAT 555 IIIKA +LIKLLSRSVPAPQA+KIL+DEM C IIKIG++IRNKERFVKRR RLLGPN +T Sbjct: 140 IIIKANELIKLLSRSVPAPQAIKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGPNLST 199
Query: 556 LKAIELLTGCYMLVQGNTVAAMGSFKGLKAVRRI 657 LKAIE+LTGCY+LVQGNT AAMG +KGLK V R+ Sbjct: 200 LKAIEILTGCYILVQGNTAAAMGYWKGLKQVVRV 233
|