DK960343
Clone id TST39A01NGRL0007_C15
Library
Length 659
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTCGCAACCAGTCGAGAGAAGAGAGACAGCGAGGCGCACACCTCGTGACTAGAGATGGAA
ATGGGAGAGCAGGAGAAGGAGGTCCAGTACAATGCCCAGGGGAAGCGGAAGGGCAAGCAC
GACAAACCCAAACCTTGGGACACTCCCGATATCGACCACTGGAAAGTAGAGCCGTTTCAG
CCTACTTGGAATGAAGGCGGCCTTTTAGAAGAGAGCTCCTTCTGCACGCTCTTCCCGCAG
TATAGAGAAAAGTACTTGCAGGACGTCTGGCCCGTGGTCACAAAGACTTTAAAAGAGCAT
GGCATAGCTTGTAATCTAAATCTAGTTGAGGGTTCGATGACTGTCTCAACCACTCGGAAA
ACACGTGATCCTTACATCATCATCAAAGCACGTGATCTTATTAAGCTTCTGTCTCGAAGC
GTCCCTGCTCCTCAGGCCTTGAAGATACTAGATGATGAGATGCAATGTGACATAATCAAG
ATTGGGAATATGATCCGAAATAAGGAAAGATTTGTGAAAAGAAGGCAAAGATTGCTAGGG
CCAAATGGGGCAACATTGAAGGCAATAGAGCTTTTGACTGGCTGCTACATGCTGGTGCAG
GGGAATACTGTGGCTGCAATGGGGTCTTTTAAGGGGCTTAAAGCAGTTCGACGTATTGT
■■Homology search results ■■ -
sp_hit_id O74777
Definition sp|O74777|MIS3_SCHPO Ribosomal RNA assembly protein mis3 OS=Schizosaccharomyces pombe
Align length 199
Score (bit) 265.0
E-value 2.0e-70
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960343|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C15, 5'
(659 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O74777|MIS3_SCHPO Ribosomal RNA assembly protein mis3 OS=Schi... 265 2e-70
sp|P25586|KRR1_YEAST Ribosomal RNA assembly protein KRR1 OS=Sacc... 258 1e-68
sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component hom... 234 4e-61
sp|Q8BGA5|KRR1_MOUSE KRR1 small subunit processome component hom... 229 1e-59
sp|Q3B7L9|KRR1_BOVIN KRR1 small subunit processome component hom... 226 8e-59
sp|Q54UU6|KRR1_DICDI KRR1 small subunit processome component hom... 220 5e-57
sp|Q57885|Y443_METJA KH domain-containing protein MJ0443 OS=Meth... 68 4e-11
sp|Q4WNG7|PNO1_ASPFU Pre-rRNA-processing protein pno1 OS=Aspergi... 52 2e-06
sp|Q1DQZ5|PNO1_COCIM Pre-rRNA-processing protein PNO1 OS=Coccidi... 44 6e-04
sp|Q0UWT7|PNO1_PHANO Pre-rRNA-processing protein PNO1 OS=Phaeosp... 44 8e-04
sp|Q99216|PNO1_YEAST Pre-rRNA-processing protein PNO1 OS=Sacchar... 40 0.014
sp|Q6BJ75|PNO1_DEBHA Pre-rRNA-processing protein PNO1 OS=Debaryo... 39 0.019
sp|Q5ACM4|PNO1_CANAL Pre-rRNA-processing protein PNO1 OS=Candida... 39 0.019
sp|Q4IN63|PNO1_GIBZE Pre-rRNA-processing protein PNO1 OS=Gibbere... 38 0.054
sp|Q6CUA5|PNO1_KLULA Pre-rRNA-processing protein PNO1 OS=Kluyver... 35 0.35
sp|Q753C6|PNO1_ASHGO Pre-rRNA-processing protein PNO1 OS=Ashbya ... 35 0.35
sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4... 35 0.35
sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=... 33 1.3
sp|Q6FMB3|PNO1_CANGA Pre-rRNA-processing protein PNO1 OS=Candida... 33 1.3
sp|Q03610|YN81_CAEEL Uncharacterized protein ZC84.1 OS=Caenorhab... 33 1.7
sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=... 33 1.7
sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE... 33 1.7
sp|Q5T871|LELP1_HUMAN Late cornified envelope-like proline-rich ... 33 1.7
sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE... 32 2.3
sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1 32 2.3
sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 ... 32 2.3
sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 ... 32 2.3
sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=... 32 2.3
sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis silvestris catus GN... 32 2.3
sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2... 32 2.3

>sp|O74777|MIS3_SCHPO Ribosomal RNA assembly protein mis3
OS=Schizosaccharomyces pombe GN=mis3 PE=2 SV=1
Length = 327

Score = 265 bits (677), Expect = 2e-70
Identities = 130/199 (65%), Positives = 155/199 (77%)
Frame = +1

Query: 61 MGEQEKEVQYNAQGKRKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQ 240
M E E + N + ++ + KPWDT DIDHWK+EPF ++ LEESSF TLFP+
Sbjct: 1 MTEVESSTENNVIVNKNKRYRRDKPWDTDDIDHWKIEPFTKDDSKESFLEESSFATLFPK 60

Query: 241 YREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRS 420
YREKYL++VWP VT+ L + GI C L+LVEGSMTV TTRKT DPY I+ ARDLIKLL+RS
Sbjct: 61 YREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARS 120

Query: 421 VPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQ 600
VP PQA+KI+ D + CDIIKIGN++RNKERFVKRRQRL+G NG TLKA+ELLT CY+LVQ
Sbjct: 121 VPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQ 180

Query: 601 GNTVAAMGSFKGLKAVRRI 657
G TVA MG +KGLK VRRI
Sbjct: 181 GTTVAVMGGYKGLKEVRRI 199


>sp|P25586|KRR1_YEAST Ribosomal RNA assembly protein KRR1
OS=Saccharomyces cerevisiae GN=KRR1 PE=1 SV=1
Length = 316

Score = 258 bits (660), Expect = 1e-68
Identities = 127/182 (69%), Positives = 148/182 (81%), Gaps = 2/182 (1%)
Frame = +1

Query: 118 HDKPKPWDTPDIDHWKVEPFQPTWNEGG--LLEESSFCTLFPQYREKYLQDVWPVVTKTL 291
H++ KPWDT DID WK+E F+ N G EESSF TLFP+YRE YL+ +W VT+ L
Sbjct: 5 HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64

Query: 292 KEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILDDEMQCD 471
+H IAC L+LVEGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M CD
Sbjct: 65 DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124

Query: 472 IIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFKGLKAVR 651
+IKIGN + NKERFVKRRQRL+GPNG TLKA+ELLT CY+LVQGNTV+AMG FKGLK VR
Sbjct: 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184

Query: 652 RI 657
R+
Sbjct: 185 RV 186


>sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component
homolog OS=Homo sapiens GN=KRR1 PE=1 SV=4
Length = 381

Score = 234 bits (596), Expect = 4e-61
Identities = 116/192 (60%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Frame = +1

Query: 100 GKRKGKHDKPKPWDTPDI------DHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQ 261
GK + ++ KPKP + + D WK F N GLLEESSF TLFP+YRE YL+
Sbjct: 14 GKSEFRNQKPKPENQDESELLTVPDGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLK 73

Query: 262 DVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQAL 441
+ WP+V K L EH + L+L+EGSMTV TT+KT DPYIII+ARDLIKLL+RSV QA+
Sbjct: 74 ECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAV 133

Query: 442 KILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAM 621
+IL D++ CDIIKIG+++RNKERFVKRRQRL+GP G+TLKA+ELLT CY++VQGNTV+A+
Sbjct: 134 RILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAI 193

Query: 622 GSFKGLKAVRRI 657
G F GLK VR++
Sbjct: 194 GPFSGLKEVRKV 205


>sp|Q8BGA5|KRR1_MOUSE KRR1 small subunit processome component
homolog OS=Mus musculus GN=Krr1 PE=2 SV=1
Length = 380

Score = 229 bits (583), Expect = 1e-59
Identities = 110/168 (65%), Positives = 136/168 (80%)
Frame = +1

Query: 154 DHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEG 333
D WK F N GLLEESSF TLFP+YRE YL++ WP+V K L EH + L+L+EG
Sbjct: 37 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEG 96

Query: 334 SMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERF 513
SMTV TT+KT DPYIII+ARDLIKLL+RSV QA++IL D++ CDIIKIG+++RNKERF
Sbjct: 97 SMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERF 156

Query: 514 VKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFKGLKAVRRI 657
VKRRQRL+GP G+TLKA+ELLT CY++VQGNTV+A+G F GLK VR++
Sbjct: 157 VKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKV 204


>sp|Q3B7L9|KRR1_BOVIN KRR1 small subunit processome component
homolog OS=Bos taurus GN=KRR1 PE=2 SV=1
Length = 382

Score = 226 bits (576), Expect = 8e-59
Identities = 116/205 (56%), Positives = 147/205 (71%), Gaps = 6/205 (2%)
Frame = +1

Query: 61 MGEQEKEVQYNAQGKRKGKHDKPKPWDTPDI------DHWKVEPFQPTWNEGGLLEESSF 222
M ++ A GK + + KP + + D WK F N GLLEESSF
Sbjct: 1 MASSKQNGPTTASGKSELRSPKPTSENRDESELLTVPDGWKEPAFSKEDNPRGLLEESSF 60

Query: 223 CTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLI 402
TLFP+YRE YL++ WP+V K L EH I L+L+EGSMTV TT+KT DPYIII+ARDLI
Sbjct: 61 ATLFPKYREAYLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPYIIIRARDLI 120

Query: 403 KLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTG 582
KLL+RSV QA++IL D++ CDIIKIG+++RNKERFVKRRQRL+GP G+TLKA+ELLT
Sbjct: 121 KLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTN 180

Query: 583 CYMLVQGNTVAAMGSFKGLKAVRRI 657
CY++VQGNTV+A+G F LK VR++
Sbjct: 181 CYIMVQGNTVSAIGPFSVLKEVRKV 205


>sp|Q54UU6|KRR1_DICDI KRR1 small subunit processome component
homolog OS=Dictyostelium discoideum GN=krr1 PE=3 SV=1
Length = 374

Score = 220 bits (561), Expect = 5e-57
Identities = 116/207 (56%), Positives = 153/207 (73%), Gaps = 8/207 (3%)
Frame = +1

Query: 61 MGEQEK-EVQYNAQGKRKGKHDKPKPWDTPDI----DHWKVEPFQPTWNEGG---LLEES 216
MG+++K E++ + K K ++ K K + +I D WK P + ++ G L ++S
Sbjct: 1 MGKKDKTEIKVEEENKEKKQYKKKKEREELEIPKGIDPWK--PLELKRDDVGKRVLYDDS 58

Query: 217 SFCTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARD 396
SF TLFP+YREKYLQ++W +V L EHGI C L+L+EGSMTV+TT+K DP I+KARD
Sbjct: 59 SFATLFPKYREKYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARD 118

Query: 397 LIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELL 576
LIKLLSRSVP A K+L+D+ CDIIKIG +RNKERFVKRRQRL+GP+G+TLKAIELL
Sbjct: 119 LIKLLSRSVPFEHAQKVLNDDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLKAIELL 178

Query: 577 TGCYMLVQGNTVAAMGSFKGLKAVRRI 657
T CY+LVQGNTV+++G + GL VR+I
Sbjct: 179 TKCYVLVQGNTVSSIGPWNGLVQVRKI 205


>sp|Q57885|Y443_METJA KH domain-containing protein MJ0443
OS=Methanocaldococcus jannaschii GN=MJ0443 PE=4 SV=1
Length = 227

Score = 68.2 bits (165), Expect = 4e-11
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +1

Query: 277 VTKTL-KEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILD 453
V KT+ KE G+ ++ +G++T+ T K +DP + KARD+++ + R ALK++
Sbjct: 36 VKKTIEKELGVKLEID-ADGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVS 94

Query: 454 DEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFK 633
DE ++I I + + + + R++G G + + IE LTG + V GNTVA +G +
Sbjct: 95 DEYVLEVIDIEDYASSDNSIRRLKGRVIGKEGKSRRYIESLTGANVSVYGNTVAIVGEHE 154

Query: 634 GLKAVR 651
++ +
Sbjct: 155 PVQIAK 160


>sp|Q4WNG7|PNO1_ASPFU Pre-rRNA-processing protein pno1
OS=Aspergillus fumigatus GN=pno1 PE=3 SV=1
Length = 252

Score = 52.4 bits (124), Expect = 2e-06
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Frame = +1

Query: 61 MGEQEKEVQYNAQGKRKGKHDKPKPWDTPDIDHWKVE-------PFQPTWNEGGLLEESS 219
+ +E + +++ + G+ + P P T H + F P + G +L +
Sbjct: 15 LSAEEPSLTFSSDAQASGQGEAPSPIPTESAQHSDMRIDEESRPVFTPITDAGTVLRVET 74

Query: 220 FCTLFPQYREKYLQDVWPVVTKTLKEH-GIACNLNLVEGSMTVSTTRKTRDPYIIIKARD 396
P +R L+ WP + L EH + +N+ ++ + T++ T D + K D
Sbjct: 75 RKVPVPPHRMTPLKANWPKIYPPLVEHLKLQVRMNIKNRAVELRTSKFTTDTGALQKGED 134

Query: 397 LIKLLSRSVPAPQALKILD-DEMQCDIIKIGNMIR--NKERFVKRRQRLLGPNGATLKAI 567
+K + A+ +L D++ +I ++ N E + R+ G +G T AI
Sbjct: 135 FVKAFTLGFDVDDAIALLRLDDLYIRSFEIRDVKASLNGEHLSRAIGRIAGKDGKTKFAI 194

Query: 568 ELLTGCYMLVQGNTVAAMGSFKGL 639
E + +++QG V +G F+ L
Sbjct: 195 ENASRTRVVLQGTKVTILGRFRDL 218


>sp|Q1DQZ5|PNO1_COCIM Pre-rRNA-processing protein PNO1
OS=Coccidioides immitis GN=PNO1 PE=3 SV=1
Length = 255

Score = 44.3 bits (103), Expect = 6e-04
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1

Query: 235 PQYREKYLQDVWPVVTKTLKEH-GIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLL 411
P +R L+ WP + L EH + +N+ ++ + T++ T D + K D IK
Sbjct: 84 PPHRMSPLKAAWPKIYPPLVEHLKLQVRMNIKSKAVELRTSKNTTDTGALQKGEDFIKAF 143

Query: 412 SRSVPAPQALKILD-DEMQCDIIKIGNMIR-NKERFVKRRQRLLGPNGATLKAIELLTGC 585
+ A+ +L D++ + +I ++ N E + R+ G +G T AIE +
Sbjct: 144 TLGFDVDDAIALLRLDDLYIETFEIKDVKPLNGEHLGRAIGRIAGKDGKTKFAIENASRT 203

Query: 586 YMLVQGNTVAAMGSFKGLKAVR 651
+++ + +G F+ ++ R
Sbjct: 204 RVVLADQKIHILGGFRNIRIAR 225


>sp|Q0UWT7|PNO1_PHANO Pre-rRNA-processing protein PNO1
OS=Phaeosphaeria nodorum GN=PNO1 PE=3 SV=1
Length = 262

Score = 43.9 bits (102), Expect = 8e-04
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Frame = +1

Query: 235 PQYREKYLQDVWPVVTKTLKEH-GIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLL 411
P +R L+ WP + L EH + +N+ S+ + T++ T D + K D +K
Sbjct: 91 PPHRMTPLKTAWPKIYPPLVEHLKLQVRMNIKTKSVELRTSKSTTDTGALQKGEDFVKAF 150

Query: 412 SRSVPAPQALKILD-DEMQCDIIKIGNM-IRNKERFVKRRQRLLGPNGATLKAIELLTGC 585
+ A+ +L D++ + +I ++ E + R+ G +G T AIE +
Sbjct: 151 TLGFDVDDAIALLRLDDLYIETFEIKDVKTLQGEHMGRAIGRIAGKDGKTKFAIENASRT 210

Query: 586 YMLVQGNTVAAMGSFKGLKAVR 651
+++ + + +G FK + R
Sbjct: 211 RVVLADSKIHILGGFKNIHVAR 232


tr_hit_id A9SPQ0
Definition tr|A9SPQ0|A9SPQ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 208
Score (bit) 321.0
E-value 3.0e-86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960343|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C15, 5'
(659 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SPQ0|A9SPQ0_PHYPA Predicted protein OS=Physcomitrella paten... 321 3e-86
tr|Q7XDT2|Q7XDT2_ORYSJ Os10g0452800 protein OS=Oryza sativa subs... 316 7e-85
tr|B8BH83|B8BH83_ORYSI Putative uncharacterized protein OS=Oryza... 316 7e-85
tr|A7QW68|A7QW68_VITVI Chromosome chr3 scaffold_199, whole genom... 305 2e-81
tr|Q9FT93|Q9FT93_ARATH Rev interacting protein mis3-like OS=Arab... 303 6e-81
tr|Q8LBT7|Q8LBT7_ARATH Rev interacting protein mis3-like OS=Arab... 303 6e-81
tr|Q014E9|Q014E9_OSTTA RRNA processing protein (ISS) OS=Ostreoco... 287 5e-76
tr|A4S0U1|A4S0U1_OSTLU Predicted protein OS=Ostreococcus lucimar... 286 8e-76
tr|Q5N8D1|Q5N8D1_ORYSJ Rev protein (42.9 kD)-like (Putative unch... 284 4e-75
tr|A2WUE2|A2WUE2_ORYSI Putative uncharacterized protein OS=Oryza... 284 4e-75
tr|B6JW85|B6JW85_SCHJP Ribosomal RNA assembly protein mis3 OS=Sc... 275 2e-72
tr|A8PX84|A8PX84_MALGO Putative uncharacterized protein OS=Malas... 273 9e-72
tr|B6KBZ5|B6KBZ5_TOXGO Ribosomal RNA assembly protein, putative ... 271 2e-71
tr|Q4P9H2|Q4P9H2_USTMA Putative uncharacterized protein OS=Ustil... 269 1e-70
tr|B8C0X8|B8C0X8_THAPS Putative uncharacterized protein OS=Thala... 267 4e-70
tr|Q1DNC9|Q1DNC9_COCIM Putative uncharacterized protein OS=Cocci... 267 5e-70
tr|Q0CXZ3|Q0CXZ3_ASPTN Ribosomal RNA assembly protein mis3 OS=As... 267 5e-70
tr|Q5B0Q5|Q5B0Q5_EMENI Putative uncharacterized protein OS=Emeri... 266 1e-69
tr|A1C6I1|A1C6I1_ASPCL rRNA assembly protein Mis3, putative OS=A... 265 1e-69
tr|A5DJ53|A5DJ53_PICGU Putative uncharacterized protein OS=Pichi... 264 4e-69
tr|A7TFC5|A7TFC5_VANPO Putative uncharacterized protein OS=Vande... 263 7e-69
tr|A8IKA1|A8IKA1_CHLRE Predicted protein (Fragment) OS=Chlamydom... 262 1e-68
tr|Q4X132|Q4X132_ASPFU RRNA assembly protein Mis3, putative OS=A... 262 1e-68
tr|B0XSG8|B0XSG8_ASPFC rRNA assembly protein Mis3, putative OS=A... 262 1e-68
tr|A1DH53|A1DH53_NEOFI RRNA assembly protein Mis3, putative OS=N... 262 1e-68
tr|B7FXP7|B7FXP7_PHATR Predicted protein OS=Phaeodactylum tricor... 261 2e-68
tr|B6H6H3|B6H6H3_PENCH Pc15g00270 protein OS=Penicillium chrysog... 260 5e-68
tr|B3RLB7|B3RLB7_TRIAD Putative uncharacterized protein OS=Trich... 260 6e-68
tr|Q6CV23|Q6CV23_KLULA KLLA0C00506p OS=Kluyveromyces lactis GN=K... 260 6e-68
tr|B8M3R6|B8M3R6_9EURO rRNA assembly protein Mis3, putative OS=T... 259 1e-67

>tr|A9SPQ0|A9SPQ0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_133145 PE=4 SV=1
Length = 345

Score = 321 bits (822), Expect = 3e-86
Identities = 157/208 (75%), Positives = 182/208 (87%), Gaps = 7/208 (3%)
Frame = +1

Query: 55 MEMGEQEKEV----QYNAQGKR---KGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEE 213
+E E KEV + GK+ KGKHDKPKPWDT DI+HWK+E F P++NEGG+LEE
Sbjct: 4 LERDEDTKEVAPELEIEVTGKKPKHKGKHDKPKPWDTDDIEHWKLEKFDPSFNEGGMLEE 63

Query: 214 SSFCTLFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKAR 393
SSF TLFP YREKYL++ WPV+T+ LKEHGI L+LV+GSMTVSTTRKTRDPYII+KAR
Sbjct: 64 SSFATLFPAYREKYLRETWPVITQALKEHGIKAVLDLVKGSMTVSTTRKTRDPYIIMKAR 123

Query: 394 DLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIEL 573
DL+KLLSRSVPAPQALKIL+D+MQCDIIKIGN+IRNKERFVKRRQRLLGPNGATLKA+EL
Sbjct: 124 DLMKLLSRSVPAPQALKILEDDMQCDIIKIGNLIRNKERFVKRRQRLLGPNGATLKALEL 183

Query: 574 LTGCYMLVQGNTVAAMGSFKGLKAVRRI 657
LTGCY+LVQG+TV+AMG +KGLKAVRR+
Sbjct: 184 LTGCYVLVQGSTVSAMGPWKGLKAVRRV 211


>tr|Q7XDT2|Q7XDT2_ORYSJ Os10g0452800 protein OS=Oryza sativa subsp.
japonica GN=Os10g0452800 PE=2 SV=1
Length = 395

Score = 316 bits (810), Expect = 7e-85
Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 1/203 (0%)
Frame = +1

Query: 52 EMEMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCT 228
E +EV + KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE SSF T
Sbjct: 8 EANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFST 67

Query: 229 LFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKL 408
LFPQYREKYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKTRDPYII+KA++LIKL
Sbjct: 68 LFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIKL 127

Query: 409 LSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCY 588
LSRSVPAPQA+KIL+DEM CDIIKIG++IRNKERFVKRR+RLLGPN +TLKAIE+LTGCY
Sbjct: 128 LSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCY 187

Query: 589 MLVQGNTVAAMGSFKGLKAVRRI 657
+LVQGNTVAAMGS+KGLK VRR+
Sbjct: 188 ILVQGNTVAAMGSWKGLKQVRRV 210


>tr|B8BH83|B8BH83_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_33853 PE=4 SV=1
Length = 395

Score = 316 bits (810), Expect = 7e-85
Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 1/203 (0%)
Frame = +1

Query: 52 EMEMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCT 228
E +EV + KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE SSF T
Sbjct: 8 EANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFST 67

Query: 229 LFPQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKL 408
LFPQYREKYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKTRDPYII+KA++LIKL
Sbjct: 68 LFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIKL 127

Query: 409 LSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCY 588
LSRSVPAPQA+KIL+DEM CDIIKIG++IRNKERFVKRR+RLLGPN +TLKAIE+LTGCY
Sbjct: 128 LSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKERFVKRRERLLGPNLSTLKAIEILTGCY 187

Query: 589 MLVQGNTVAAMGSFKGLKAVRRI 657
+LVQGNTVAAMGS+KGLK VRR+
Sbjct: 188 ILVQGNTVAAMGSWKGLKQVRRV 210


>tr|A7QW68|A7QW68_VITVI Chromosome chr3 scaffold_199, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00007719001
PE=4 SV=1
Length = 387

Score = 305 bits (780), Expect = 2e-81
Identities = 149/202 (73%), Positives = 168/202 (83%), Gaps = 1/202 (0%)
Frame = +1

Query: 55 MEMGEQEKEVQYNAQGKRKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLF 234
ME E EV+ + K KGKHDKPKPWD P IDHWKV+ F P+WNEGG+LE SSF TLF
Sbjct: 1 MEESNGEVEVERKEKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSFSTLF 60

Query: 235 PQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLS 414
PQYREKYLQ+ WP V LKE G+ LNLVEG MTVSTTRKTRDPYII+KARDLIKLLS
Sbjct: 61 PQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIKLLS 120

Query: 415 RSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYML 594
RSVPAPQA+KIL+DEMQCDIIKIG+++RNKERFVKRRQ L+ G +L A+E+LTGCY+L
Sbjct: 121 RSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLIPLFGVSLTALEILTGCYIL 180

Query: 595 V-QGNTVAAMGSFKGLKAVRRI 657
V QGNTVAAMGSFKGLK VRR+
Sbjct: 181 VQQGNTVAAMGSFKGLKQVRRV 202


>tr|Q9FT93|Q9FT93_ARATH Rev interacting protein mis3-like
OS=Arabidopsis thaliana GN=F8L15_150 PE=2 SV=1
Length = 391

Score = 303 bits (776), Expect = 6e-81
Identities = 144/201 (71%), Positives = 172/201 (85%), Gaps = 1/201 (0%)
Frame = +1

Query: 58 EMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLF 234
E+ +E+ ++ + K+KGKH+KPKPWD P+ID W +E F P WN G+ E S+F TLF
Sbjct: 6 EIAHEEQNIE--KREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLF 63

Query: 235 PQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLS 414
PQYREKYLQ+ WP V LKE+G+AC LNLVEGSMTVSTTRKTRDPYII+KARDLIKLLS
Sbjct: 64 PQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLS 123

Query: 415 RSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYML 594
RSVPAPQA+KIL+DE+QCDIIKIGN++RNKERFVKRRQRL+GPN +TLKA+E+LT CY+L
Sbjct: 124 RSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYIL 183

Query: 595 VQGNTVAAMGSFKGLKAVRRI 657
VQG+TVAAMG FKGLK +RRI
Sbjct: 184 VQGSTVAAMGPFKGLKQLRRI 204


>tr|Q8LBT7|Q8LBT7_ARATH Rev interacting protein mis3-like
OS=Arabidopsis thaliana PE=2 SV=1
Length = 391

Score = 303 bits (776), Expect = 6e-81
Identities = 144/201 (71%), Positives = 172/201 (85%), Gaps = 1/201 (0%)
Frame = +1

Query: 58 EMGEQEKEVQYNAQGKRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLF 234
E+ +E+ ++ + K+KGKH+KPKPWD P+ID W +E F P WN G+ E S+F TLF
Sbjct: 6 EIAHEEQNIE--KREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLF 63

Query: 235 PQYREKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLS 414
PQYREKYLQ+ WP V LKE+G+AC LNLVEGSMTVSTTRKTRDPYII+KARDLIKLLS
Sbjct: 64 PQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLS 123

Query: 415 RSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYML 594
RSVPAPQA+KIL+DE+QCDIIKIGN++RNKERFVKRRQRL+GPN +TLKA+E+LT CY+L
Sbjct: 124 RSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYIL 183

Query: 595 VQGNTVAAMGSFKGLKAVRRI 657
VQG+TVAAMG FKGLK +RRI
Sbjct: 184 VQGSTVAAMGPFKGLKQLRRI 204


>tr|Q014E9|Q014E9_OSTTA RRNA processing protein (ISS)
OS=Ostreococcus tauri GN=Ot07g04570 PE=4 SV=1
Length = 419

Score = 287 bits (734), Expect = 5e-76
Identities = 134/184 (72%), Positives = 159/184 (86%)
Frame = +1

Query: 106 RKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQDVWPVVTK 285
+KG++ + KPWD IDHW+V+PF N G+LEESSF LFP+YREKYL++VWP VT+
Sbjct: 41 KKGRYRRDKPWDHDGIDHWRVDPFTAEDNPHGVLEESSFAVLFPKYREKYLREVWPSVTR 100

Query: 286 TLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILDDEMQ 465
LKE G++C LNLVEGSMTV TTRKT DPYII+KARDLIKLLSRSVPAPQALK+LDD+
Sbjct: 101 ALKEQGVSCELNLVEGSMTVRTTRKTFDPYIIVKARDLIKLLSRSVPAPQALKVLDDDTN 160

Query: 466 CDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFKGLKA 645
CD+IKIG M+RNKERFVKRRQRL+GPNG+TLKAIE+LTGCY+LVQGNTV+ MG +KGLK
Sbjct: 161 CDVIKIGGMVRNKERFVKRRQRLIGPNGSTLKAIEMLTGCYVLVQGNTVSVMGGWKGLKT 220

Query: 646 VRRI 657
VR+I
Sbjct: 221 VRKI 224


>tr|A4S0U1|A4S0U1_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_32864 PE=4 SV=1
Length = 415

Score = 286 bits (732), Expect = 8e-76
Identities = 135/188 (71%), Positives = 158/188 (84%)
Frame = +1

Query: 94 AQGKRKGKHDKPKPWDTPDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYREKYLQDVWP 273
+ G +KG++ + KPWD IDHW V PF N G+LEESSF LFP+YREKYL++ WP
Sbjct: 36 SSGAKKGRYRRDKPWDHDGIDHWSVTPFTAEDNPNGVLEESSFAVLFPKYREKYLRETWP 95

Query: 274 VVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAPQALKILD 453
VTK LKE G++C LNLVEGSMTV TTRKT DPYII+KARDLIKLLSRSVPAPQALK+L+
Sbjct: 96 SVTKALKEQGVSCELNLVEGSMTVRTTRKTFDPYIIMKARDLIKLLSRSVPAPQALKVLE 155

Query: 454 DEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGATLKAIELLTGCYMLVQGNTVAAMGSFK 633
DE CD+IKIG M+RNKERFVKRRQRL+GPNG+TLKAIE+LTGCY+LVQGNTV+ MG +K
Sbjct: 156 DETNCDVIKIGGMVRNKERFVKRRQRLIGPNGSTLKAIEMLTGCYVLVQGNTVSVMGGWK 215

Query: 634 GLKAVRRI 657
GLK VR+I
Sbjct: 216 GLKMVRKI 223


>tr|Q5N8D1|Q5N8D1_ORYSJ Rev protein (42.9 kD)-like (Putative
uncharacterized protein) OS=Oryza sativa subsp. japonica
GN=B1142C05.33 PE=4 SV=1
Length = 421

Score = 284 bits (726), Expect = 4e-75
Identities = 143/214 (66%), Positives = 164/214 (76%), Gaps = 29/214 (13%)
Frame = +1

Query: 103 KRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYR----------- 246
+ KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE +SF TLFPQYR
Sbjct: 20 RHKGKHDKPKPWDDDPNIDHWKIEEFDPSWNEGGMLEVTSFSTLFPQYRGKSPHPTPPSA 79

Query: 247 -----------------EKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPY 375
+KYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKT+DPY
Sbjct: 80 LSWFLPRSAIDWFCLVVKKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPY 139

Query: 376 IIIKARDLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGAT 555
IIIKA +LIKLLSRSVPAPQA+KIL+DEM C IIKIG++IRNKERFVKRR RLLGPN +T
Sbjct: 140 IIIKANELIKLLSRSVPAPQAIKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGPNLST 199

Query: 556 LKAIELLTGCYMLVQGNTVAAMGSFKGLKAVRRI 657
LKAIE+LTGCY+LVQGNT AAMG +KGLK V R+
Sbjct: 200 LKAIEILTGCYILVQGNTAAAMGYWKGLKQVVRV 233


>tr|A2WUE2|A2WUE2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03494 PE=4 SV=1
Length = 421

Score = 284 bits (726), Expect = 4e-75
Identities = 143/214 (66%), Positives = 164/214 (76%), Gaps = 29/214 (13%)
Frame = +1

Query: 103 KRKGKHDKPKPWDT-PDIDHWKVEPFQPTWNEGGLLEESSFCTLFPQYR----------- 246
+ KGKHDKPKPWD P+IDHWK+E F P+WNEGG+LE +SF TLFPQYR
Sbjct: 20 RHKGKHDKPKPWDDDPNIDHWKIEEFDPSWNEGGMLEVTSFSTLFPQYRGKSPHPTPPSA 79

Query: 247 -----------------EKYLQDVWPVVTKTLKEHGIACNLNLVEGSMTVSTTRKTRDPY 375
+KYLQ+ WP+V LKE G+AC LNLVEGSMTVSTTRKT+DPY
Sbjct: 80 LSWFLPRSAIDWFCLVVKKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPY 139

Query: 376 IIIKARDLIKLLSRSVPAPQALKILDDEMQCDIIKIGNMIRNKERFVKRRQRLLGPNGAT 555
IIIKA +LIKLLSRSVPAPQA+KIL+DEM C IIKIG++IRNKERFVKRR RLLGPN +T
Sbjct: 140 IIIKANELIKLLSRSVPAPQAIKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGPNLST 199

Query: 556 LKAIELLTGCYMLVQGNTVAAMGSFKGLKAVRRI 657
LKAIE+LTGCY+LVQGNT AAMG +KGLK V R+
Sbjct: 200 LKAIEILTGCYILVQGNTAAAMGYWKGLKQVVRV 233