DK960344 |
Clone id |
TST39A01NGRL0007_C16 |
Library |
TST39 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C16. 5' end sequence. |
Accession |
DK960344 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig2 |
Sequence |
CACAGACAGTTGAATTGAAAGTGGCTATGAGTTGCCAAGGTTGTGTTGGTGCAGTGAAGA GGGTGCTTGGGAAGATGGAAGGGGTAAATACATATGATATAGACTTGGATGCGCAGAAAG TGACTGTGAAAGGGAACGTCAAGCCAGAGGATGTTCTTTCTACTGTTTCCAAAACTGGGA AAGCTACATCGTTTTGGCCAAGTGAAGGAAGTACAGCATCATAGTTTTATTTGTAAATTG ATTTTTGGCTATTGTGACAAGAGCTATGCTCATGAAGTGGCTGATGATTAAAAAAAACTC TTGCATACTATACGACATATTTATGTCATGATCTTATTCCATCTTGCCAACTTGTGCGCC GTGGTATGATTAATGATATCACTATCCTATATGACATTAGTGTGGCTTTGTACATTTCAA TCCTTTTGCCCATCAAGTTGTGGTACTGCATCTTGTATAGTTCTTTGACTCATTCTACCC GCTATCCCCTCAAATCAGTGAAGAATTGGATTGTTTGATAGGAAAAAAAAAAAAAAAAAA AAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XT28 |
Definition |
sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries |
Align length |
61 |
Score (bit) |
55.1 |
E-value |
2.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5ZF67 |
Definition |
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major |
Align length |
70 |
Score (bit) |
113.0 |
E-value |
5.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960344|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C16, 5' (522 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch... 113 5e-24 tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea... 111 2e-23 tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana... 111 2e-23 tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populu... 110 5e-23 tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 110 5e-23 tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Popul... 110 5e-23 tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Popul... 110 5e-23 tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum ... 109 9e-23 tr|B2CM19|B2CM19_SOLCH Copper chaperone OS=Solanum chacoense PE=... 109 9e-23 tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genom... 109 9e-23 tr|A9P875|A9P875_POPTR Putative uncharacterized protein OS=Popul... 108 1e-22 tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O... 108 2e-22 tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sat... 108 2e-22 tr|Q70DK1|Q70DK1_HORVD Chopper chaperone OS=Hordeum vulgare var.... 108 2e-22 tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subs... 108 2e-22 tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea m... 108 2e-22 tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea m... 108 2e-22 tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea m... 108 2e-22 tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert seque... 107 3e-22 tr|B6T1K0|B6T1K0_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 107 3e-22 tr|A1ECK4|A1ECK4_9ROSI Putative copper chaperone OS=Citrus hybri... 107 5e-22 tr|Q6ZCF3|Q6ZCF3_ORYSJ Os08g0205400 protein OS=Oryza sativa subs... 104 3e-21 tr|A2YSB2|A2YSB2_ORYSI Putative uncharacterized protein OS=Oryza... 104 3e-21 tr|A9SR07|A9SR07_PHYPA Predicted protein OS=Physcomitrella paten... 103 7e-21 tr|Q9SE03|Q9SE03_SOYBN Copper chaperone homolog CCH OS=Glycine m... 102 1e-20 tr|Q9C7U6|Q9C7U6_ARATH Copper homeostasis factor, putative; 2714... 101 3e-20 tr|B2MUN5|B2MUN5_9CARY Copper chaperone protein OS=Knorringia si... 100 6e-20 tr|B7FJ81|B7FJ81_MEDTR Putative uncharacterized protein OS=Medic... 99 1e-19 tr|B5M1W7|B5M1W7_RHEAU Copper homeostasis factor OS=Rheum austra... 98 2e-19
>tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch1 PE=4 SV=1 Length = 109
Score = 113 bits (283), Expect = 5e-24 Identities = 54/70 (77%), Positives = 60/70 (85%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTVELKV MSCQGCVGAVKRVLGKMEGV ++DID++ QKVTVKGNV+ E VL TVSKTGK Sbjct: 3 QTVELKVGMSCQGCVGAVKRVLGKMEGVESFDIDIEKQKVTVKGNVEKEAVLQTVSKTGK 62
Query: 183 ATSFWPSEGS 212 T FWP E + Sbjct: 63 KTEFWPEEAA 72
>tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 75
Score = 111 bits (278), Expect = 2e-23 Identities = 54/72 (75%), Positives = 59/72 (81%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 +TV LKV MSC+GCVGAVKRVL KMEGV TYD++L QKVTVKGNVKP+ VL TVSKTGK Sbjct: 3 ETVVLKVGMSCEGCVGAVKRVLNKMEGVETYDVNLKEQKVTVKGNVKPDAVLQTVSKTGK 62
Query: 183 ATSFWPSEGSTA 218 TSFWP E A Sbjct: 63 ETSFWPEEKDIA 74
>tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana GN=At1g66240 PE=4 SV=1 Length = 106
Score = 111 bits (277), Expect = 2e-23 Identities = 51/72 (70%), Positives = 63/72 (87%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV L+VAM+C+GCVGAVKRVLGKMEGV ++D+D+ QKVTVKGNV+P+ VL TV+KTGK Sbjct: 33 QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 92
Query: 183 ATSFWPSEGSTA 218 T+FW +EG TA Sbjct: 93 KTAFWEAEGETA 104
>tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populus tremula var. glandulosa GN=CCH PE=4 SV=1 Length = 85
Score = 110 bits (274), Expect = 5e-23 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 3 QTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 62
Query: 183 ATSFWPSE 206 T+FW +E Sbjct: 63 KTAFWEAE 70
>tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 Length = 84
Score = 110 bits (274), Expect = 5e-23 Identities = 53/72 (73%), Positives = 60/72 (83%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV LKV MSC+GCVGAVKRVLGKMEGV +YD+D+ QKVTVKGNV P+ VL TVSKTGK Sbjct: 3 QTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDVDIMEQKVTVKGNVTPDAVLQTVSKTGK 62
Query: 183 ATSFWPSEGSTA 218 TSFW +E T+ Sbjct: 63 KTSFWEAEAVTS 74
>tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 85
Score = 110 bits (274), Expect = 5e-23 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 3 QTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 62
Query: 183 ATSFWPSE 206 T+FW +E Sbjct: 63 KTAFWEAE 70
>tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 85
Score = 110 bits (274), Expect = 5e-23 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 3 QTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGK 62
Query: 183 ATSFWPSE 206 T+FW +E Sbjct: 63 KTAFWEAE 70
>tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum GN=LeCCH PE=4 SV=1 Length = 81
Score = 109 bits (272), Expect = 9e-23 Identities = 53/65 (81%), Positives = 57/65 (87%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV LKV MSC+GCVGAVKRVLGKMEGV T+DIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 3 QTVVLKVGMSCEGCVGAVKRVLGKMEGVETFDIDLKEQKVTVKGNVQPDAVLKTVSKTGK 62
Query: 183 ATSFW 197 TSFW Sbjct: 63 PTSFW 67
>tr|B2CM19|B2CM19_SOLCH Copper chaperone OS=Solanum chacoense PE=4 SV=1 Length = 81
Score = 109 bits (272), Expect = 9e-23 Identities = 53/65 (81%), Positives = 57/65 (87%) Frame = +3
Query: 3 QTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGK 182 QTV LKV MSC+GCVGAVKRVLGKMEGV T+DIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 3 QTVVLKVGMSCEGCVGAVKRVLGKMEGVETFDIDLKEQKVTVKGNVQPDAVLKTVSKTGK 62
Query: 183 ATSFW 197 TSFW Sbjct: 63 PTSFW 67
>tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034927001 PE=4 SV=1 Length = 134
Score = 109 bits (272), Expect = 9e-23 Identities = 53/69 (76%), Positives = 59/69 (85%) Frame = +3
Query: 6 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 185 TV LKV MSC+GCVGAVKRVLGKMEGV ++DIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 52 TVVLKVGMSCEGCVGAVKRVLGKMEGVESFDIDLKEQKVTVKGNVQPDAVLKTVSKTGKK 111
Query: 186 TSFWPSEGS 212 TSFW +E S Sbjct: 112 TSFWEAEAS 120
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