DK960349
Clone id TST39A01NGRL0007_C21
Library
Length 631
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAAGCAGTTATGGCCTCCACCACCCTCTCCTCCTCCCTCTGCGGCCAGGCTGTCCTGAAG
CAGCAGGTCAGCGAGCTGTCGCGCAAGGTGGGCGCCTATGAGGCCCGCGTGCAGATGAAG
ACCAGCAAGGGCTCCAGCAGCAGCATCTGGTATGGACCGGACCGCCCCCTCTACCTGGGC
CCCCTCTCCGGTTCTCCCCCTTCCTACCTCACTGGGGAATTCCCCGGGGACTACGGCTGG
GACACGGCCGGCCTGTCCGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTC
ATCCACGCGCGTTGGGCGATGCTTGGCGCCCTGGGCTGCGTCACCCCGGAGCTGCTGGCC
AAAAACGGCGTCCCGTTCGGCGAAGCCGTCTGGTTCAAGGCCGGCTCGCAGATCTTCAGT
GACGGCGGGCTGGACTACCTGGGCAACCCCGGCCTGATACACGCTCAGAGCATCCTCGCC
ATCTGGGCCTGCCAGGTCATCCTCATGGGCGCTGTGGAGGGCTACCGAGTGGCCGGCGGC
CCGTTGGGCGACGTGTCGGACCCCGTCTACCCGGGCGGCCAGTTCGACCCCTTGGGCCTG
GCCGACGACCCTGAGGCGTTCGCCGAGCTTA
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 211
Score (bit) 318.0
E-value 2.0e-86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960349|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C21, 5'
(631 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 318 2e-86
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 298 1e-80
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 297 3e-80
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 297 3e-80
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 296 5e-80
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 296 6e-80
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 296 6e-80
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 296 6e-80
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 296 8e-80
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 296 8e-80
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 295 1e-79
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 294 2e-79
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 294 2e-79
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 293 4e-79
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 293 5e-79
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 293 7e-79
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 292 9e-79
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 292 9e-79
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 291 1e-78
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 291 1e-78
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop... 291 1e-78
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 291 2e-78
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 291 2e-78
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 291 2e-78
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 290 3e-78
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 290 3e-78
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 290 6e-78
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 289 9e-78
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 289 9e-78
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 288 2e-77

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 318 bits (814), Expect = 2e-86
Identities = 161/211 (76%), Positives = 175/211 (82%), Gaps = 4/211 (1%)
Frame = +1

Query: 10 MASTT--LSSSLCGQAVLKQQVSELSRKVGAYEARVQMKT--SKGSSSSIWYGPDRXXXX 177
MA++T L+S+ GQ + + V+ELSRKVGA EARVQM SK S SIWYG DR
Sbjct: 1 MATSTAALTSTFSGQQL--KPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 178 XXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 357
+GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL
Sbjct: 59 GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 358 AKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAG 537
AKNGV FGEAVWFKAGSQIF++GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178

Query: 538 GPLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
GPLG+V DP+YPGG FDPLGLADDPEAFAEL
Sbjct: 179 GPLGEVEDPIYPGGSFDPLGLADDPEAFAEL 209


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 298 bits (764), Expect = 1e-80
Identities = 148/210 (70%), Positives = 170/210 (80%), Gaps = 4/210 (1%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKV-GAYEARVQMK---TSKGSSSSIWYGPDRXXXXX 180
A+ S++L GQ+++K V+ELSRKV G EARV M+ + S +IWYG DR
Sbjct: 4 ATAMHSTALAGQSLVKP-VNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLG 62

Query: 181 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 360
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLA
Sbjct: 63 PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLA 122

Query: 361 KNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGG 540
K+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGG
Sbjct: 123 KSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 182

Query: 541 PLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
PLG+V+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 183 PLGEVTDPIYPGGSFDPLGLADDPDTFAEL 212



Score = 30.8 bits (68), Expect = 6.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1

Query: 220 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
+PG +D GL+ DP+TFA+ + E+ + R AM G ++ G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 267

Score = 297 bits (761), Expect = 3e-80
Identities = 155/216 (71%), Positives = 169/216 (78%), Gaps = 9/216 (4%)
Frame = +1

Query: 10 MASTTL---SSSLCGQAV-LKQQVSELSRKVGAYEARVQMKTSKGS-----SSSIWYGPD 162
MAS+T+ S SL G+AV L SE+ +G E R+ M+ + G SSS WYGPD
Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEI---IG--EGRITMRKTAGKPKTVQSSSPWYGPD 55

Query: 163 RXXXXXXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCV 342
R TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 56 RVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 115

Query: 343 TPELLAKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEG 522
PELLA+NGV FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEG
Sbjct: 116 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 175

Query: 523 YRVAGGPLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
YR+AGGPLG+V DP+YPGG FDPLGLADDPEAFAEL
Sbjct: 176 YRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 211


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
(Fragment) OS=Silene pratensis PE=2 SV=2
Length = 205

Score = 297 bits (760), Expect = 3e-80
Identities = 148/203 (72%), Positives = 159/203 (78%), Gaps = 1/203 (0%)
Frame = +1

Query: 16 STTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXXX 192
ST S+ GQ +LK Q +EL RKVG RV M+ T K + SIWYGPDR
Sbjct: 4 STIQQSAFAGQTLLKPQ-NELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 193 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 372
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 373 PFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGD 552
FGEAVWFKAGSQIF +GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRV GGPLG+
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182

Query: 553 VSDPVYPGGQFDPLGLADDPEAF 621
D +YPGG FDPLGLA+DPEAF
Sbjct: 183 GLDQLYPGGAFDPLGLAEDPEAF 205


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267

Score = 296 bits (759), Expect = 5e-80
Identities = 148/211 (70%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Frame = +1

Query: 10 MASTTL---SSSLCGQAV-LKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXX 177
MA++T+ SS+ G+AV L SE++ + K SS S WYGPDR
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 178 XXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 357
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 358 AKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAG 537
A+NGV FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 538 GPLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
GPLG+V DP+YPGG FDPLGLADDPEAFAEL
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 211


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
Length = 266

Score = 296 bits (758), Expect = 6e-80
Identities = 148/210 (70%), Positives = 161/210 (76%), Gaps = 3/210 (1%)
Frame = +1

Query: 10 MASTTL---SSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXX 180
MA+ T+ SSS G+AV S+++ A + K SS S WYGPDR
Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 181 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 360
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120

Query: 361 KNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGG 540
+NGV FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 180

Query: 541 PLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
PLG+V DP+YPGG FDPLGLADDPEAFAEL
Sbjct: 181 PLGEVIDPLYPGGSFDPLGLADDPEAFAEL 210


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264

Score = 296 bits (758), Expect = 6e-80
Identities = 147/207 (71%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 189
AS SS+ GQ LKQ+ EL RKVG + R M+ T K SIWYG DR
Sbjct: 3 ASAIQSSAFAGQTALKQR-DELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFS 61

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNG
Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNG 121

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
V FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QV+LMG +EGYRV GGPLG
Sbjct: 122 VQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLG 181

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
+ DP+YPGG FDPLGLADDPEAFAEL
Sbjct: 182 EGLDPLYPGGAFDPLGLADDPEAFAEL 208


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Length = 265

Score = 296 bits (758), Expect = 6e-80
Identities = 149/207 (71%), Positives = 162/207 (78%), Gaps = 2/207 (0%)
Frame = +1

Query: 16 STTLSSSLCGQAVLKQQVSELSRKVGAYEA-RVQMK-TSKGSSSSIWYGPDRXXXXXXXX 189
S S+ GQ LKQ +EL K+GA RV M+ T K + +SIWYGPDR
Sbjct: 4 SAIQQSAFAGQTALKQS-NELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63 DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
V FGEAVWFKAGSQIFS+GGLDYLGNP LIHAQSILAIWACQV+LMG VEGYRV GGPLG
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
+ DP+YPGG FDPLGLADDP+AFAEL
Sbjct: 183 EGLDPIYPGGAFDPLGLADDPDAFAEL 209


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
Length = 266

Score = 296 bits (757), Expect = 8e-80
Identities = 147/207 (71%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
Frame = +1

Query: 13 ASTTLSSSLCGQAV-LKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXX 189
++T LSS G+AV L SE++ + K SS S WYGPDR
Sbjct: 4 STTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFS 63

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NG
Sbjct: 64 GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 123

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
V FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 124 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 183

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
+V DP+YPGG FDPLGLA+DPEAFAEL
Sbjct: 184 EVVDPLYPGGSFDPLGLAEDPEAFAEL 210


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 296 bits (757), Expect = 8e-80
Identities = 145/207 (70%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 189
AS SSSL GQ +L+ Q +EL +KVG +AR+ M+ T + + SIWYGPDR
Sbjct: 4 ASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFS 63

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
TGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG
Sbjct: 64 EGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNG 123

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
+ FGEAVWFKAG+QIFS+GGLDY GNP LIHAQSILAIWACQV+LMG +EGYRV GG LG
Sbjct: 124 LKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLG 183

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
+ DP+ PGG FDPLGLADDPEA AEL
Sbjct: 184 EGLDPLLPGGAFDPLGLADDPEACAEL 210


tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 206
Score (bit) 313.0
E-value 4.0e-84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960349|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C21, 5'
(631 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 313 4e-84
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 311 2e-83
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 311 3e-83
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 310 4e-83
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 309 8e-83
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 309 8e-83
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 309 1e-82
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 308 2e-82
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 308 2e-82
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 306 7e-82
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 306 9e-82
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 305 1e-81
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 305 1e-81
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 305 1e-81
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 305 2e-81
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 304 3e-81
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 304 3e-81
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 303 4e-81
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 303 7e-81
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 301 2e-80
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 301 2e-80
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea... 300 4e-80
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ... 300 5e-80
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 299 8e-80
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 299 1e-79
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran... 298 1e-79
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 298 2e-79
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu... 297 3e-79
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC... 297 3e-79
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome... 297 3e-79

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
Length = 263

Score = 313 bits (803), Expect = 4e-84
Identities = 155/206 (75%), Positives = 171/206 (83%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXXX 192
A+ S++L GQ++LK V+ELSRKVG EARV M+ S GS S IWYG DR
Sbjct: 4 ATAMHSTTLAGQSLLKP-VNELSRKVGTSEARVSMRKSSGSDS-IWYGADRPKFLGPFSG 61

Query: 193 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 372
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGV
Sbjct: 62 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGV 121

Query: 373 PFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGD 552
FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVAGGPLG+
Sbjct: 122 KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 181

Query: 553 VSDPVYPGGQFDPLGLADDPEAFAEL 630
V+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 182 VTDPIYPGGSFDPLGLADDPDTFAEL 207


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
Length = 265

Score = 311 bits (797), Expect = 2e-83
Identities = 155/207 (74%), Positives = 171/207 (82%), Gaps = 1/207 (0%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQM-KTSKGSSSSIWYGPDRXXXXXXXX 189
A+ S++L GQ++LK V+ELSRKVG EAR+ M KT+ SS SIWYG DR
Sbjct: 4 ATAMHSTALAGQSLLKP-VNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGPFS 62

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNG
Sbjct: 63 GETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNG 122

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
V FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QVILMGAVEGYRVAGGPLG
Sbjct: 123 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLG 182

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
DV+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 183 DVTDPIYPGGSFDPLGLADDPDTFAEL 209


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
Length = 263

Score = 311 bits (796), Expect = 3e-83
Identities = 153/206 (74%), Positives = 172/206 (83%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXXX 192
A+ S++L GQ++LK V+ELSR+VGA EARV M+ S GS S IWYG DR
Sbjct: 4 ATACASTALAGQSLLKP-VNELSRRVGANEARVTMRKSAGSDS-IWYGADRPKFLGPFSG 61

Query: 193 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 372
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GV
Sbjct: 62 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGV 121

Query: 373 PFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGD 552
FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVAGGPLG+
Sbjct: 122 KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 181

Query: 553 VSDPVYPGGQFDPLGLADDPEAFAEL 630
V+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 182 VTDPIYPGGSFDPLGLADDPDTFAEL 207


>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
thunbergii GN=cab PE=4 SV=1
Length = 266

Score = 310 bits (795), Expect = 4e-83
Identities = 151/207 (72%), Positives = 167/207 (80%), Gaps = 1/207 (0%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 189
AS SSSL GQ +L+ Q +EL +KVG +AR+ M+ T + + SIWYGPDR
Sbjct: 4 ASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFS 63

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNG
Sbjct: 64 EGTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNG 123

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
V FGEAVWFKAG+QIFS+GGLDYLGNP LIHAQSILAIWACQV+LMG +EGYRV GGPLG
Sbjct: 124 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLG 183

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
+ DP+YPGG FDPLGLADDPEAFAEL
Sbjct: 184 EGLDPLYPGGAFDPLGLADDPEAFAEL 210


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 309 bits (792), Expect = 8e-83
Identities = 156/212 (73%), Positives = 171/212 (80%), Gaps = 3/212 (1%)
Frame = +1

Query: 4 AVMASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSS---SIWYGPDRXXX 174
A A+ S+ L GQA+LK VSELSRKV A EARV M+ + SS SIWYG DR
Sbjct: 2 ATAATAMNSTVLAGQALLKP-VSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 175 XXXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 354
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 355 LAKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVA 534
LAK+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 535 GGPLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
GGPLGDV+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAEL 212


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 309 bits (792), Expect = 8e-83
Identities = 156/212 (73%), Positives = 171/212 (80%), Gaps = 3/212 (1%)
Frame = +1

Query: 4 AVMASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSS---SIWYGPDRXXX 174
A A+ S+ L GQA+LK VSELSRKV A EARV M+ + SS SIWYG DR
Sbjct: 2 ATAATAMNSTVLAGQALLKP-VSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 175 XXXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 354
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 355 LAKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVA 534
LAK+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 535 GGPLGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
GGPLGDV+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAEL 212


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
Length = 263

Score = 309 bits (791), Expect = 1e-82
Identities = 153/205 (74%), Positives = 169/205 (82%)
Frame = +1

Query: 16 STTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXXXX 195
+ T S++L GQ LK ++ELSRKVG +ARV M+ + SS SIWYG DR
Sbjct: 5 TATHSTALAGQTALKS-INELSRKVGNVQARVTMRKAS-SSDSIWYGADRPKYLGPLSGE 62

Query: 196 XXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVP 375
TGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGV
Sbjct: 63 TPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVK 122

Query: 376 FGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGDV 555
FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWA QVILMGAVEGYRVAGGPLG+V
Sbjct: 123 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEV 182

Query: 556 SDPVYPGGQFDPLGLADDPEAFAEL 630
+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 183 TDPIYPGGSFDPLGLADDPDTFAEL 207


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 308 bits (789), Expect = 2e-82
Identities = 152/209 (72%), Positives = 170/209 (81%), Gaps = 3/209 (1%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK---TSKGSSSSIWYGPDRXXXXXX 183
A+ S++L GQ VLK V+ELSRKVG EARV M+ + S SIWYG DR
Sbjct: 4 ATAMHSTALAGQGVLKP-VNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGP 62

Query: 184 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 363
TGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 63 FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 122

Query: 364 NGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGP 543
+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGGP
Sbjct: 123 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP 182

Query: 544 LGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
LG+V+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 183 LGEVTDPIYPGGSFDPLGLADDPDTFAEL 211


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
Length = 265

Score = 308 bits (788), Expect = 2e-82
Identities = 151/207 (72%), Positives = 173/207 (83%), Gaps = 1/207 (0%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 189
A+ S++L GQ++LK V+ELSRKVG+ EARV M+ T K +S SIWYG DR
Sbjct: 4 ATAMHSTTLAGQSLLKP-VNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGPFS 62

Query: 190 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 369
TGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+G
Sbjct: 63 GETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSG 122

Query: 370 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 549
V FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QV+LMGAVEGYRVAGGPLG
Sbjct: 123 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPLG 182

Query: 550 DVSDPVYPGGQFDPLGLADDPEAFAEL 630
+++DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 183 EITDPIYPGGSFDPLGLADDPDTFAEL 209


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 306 bits (784), Expect = 7e-82
Identities = 153/209 (73%), Positives = 170/209 (81%), Gaps = 3/209 (1%)
Frame = +1

Query: 13 ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTS---KGSSSSIWYGPDRXXXXXX 183
A+ S++L GQ++LK V+ELSRKVG EARV M+ S +S SIWYG DR
Sbjct: 4 ATAMHSTALAGQSLLKP-VNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYLGP 62

Query: 184 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 363
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK
Sbjct: 63 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 122

Query: 364 NGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGP 543
+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 123 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 182

Query: 544 LGDVSDPVYPGGQFDPLGLADDPEAFAEL 630
LGDV+DP+YPGG FDPLGLADDP+ FAEL
Sbjct: 183 LGDVTDPIYPGGSFDPLGLADDPDTFAEL 211