DK960350 |
Clone id |
TST39A01NGRL0007_C22 |
Library |
TST39 |
Length |
633 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C22. 5' end sequence. |
Accession |
DK960350 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1634Contig1 |
Sequence |
GTGTGTTCCTTGTTGCGCTGGTGACGCTTGTGTACGCTTGTGTGTGTGCAGATATTCATT TGAGTGAACATTTGGGGCGATCTAAATGGCTTATGTTGATCGAACCTTCTCTATCACGGA GGATGATTTTGAGGGCACCTTCATCGTGCACAATCGGCCACCTGTGAAGGAAATTGCGCT CGCGATCGCTCTCCTCGCATTTGGTATATTGGGAATTCTGTTTGGCTTCATCATGATGTT CAATAAGGTTGGAGGCGACCGTGGTCATGGGTTGTTTTTTGCCATCCTCGGAGCAGTTCT TTTTCTACCGGGATTTTATTACACGCGGATTGCATACTATGCTTATAAGGGCTACAAGGG ATTCTCATTTGCAAATATACCAGCAGTGTGACCAATGGCAACCAGACCAGATGTGAGTGC GGAGTTGCAGGTAGACAAAAACACACGGTAGAGAGCTCTTACATGACCCAAAAGAGCAAT GTTGTAATATGTGTTGTATAGGATTGCGGTGTGTTTCTCTCGGCGCCATGGCATGAACCA TGGAGTTTGCACATGTAATTTACCAAGACCTCTCTAAGAGTGAATGTGGTGGGGAAGTGA GAAAGGAGTGTGCAAGACATTGTAGCTTGATTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5BJP5 |
Definition |
sp|Q5BJP5|CT030_RAT UPF0414 transmembrane protein C20orf30 homolog OS=Rattus norvegicus |
Align length |
47 |
Score (bit) |
53.9 |
E-value |
7.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NYT5 |
Definition |
tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
101 |
Score (bit) |
138.0 |
E-value |
3.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960350|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C22, 5' (633 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea... 138 3e-31 tr|A5CB04|A5CB04_VITVI Putative uncharacterized protein OS=Vitis... 132 2e-29 tr|Q207T6|Q207T6_9ASPA Putative uncharacterized protein OS=Gymna... 132 2e-29 tr|A9SRL6|A9SRL6_PHYPA Predicted protein OS=Physcomitrella paten... 128 2e-28 tr|Q9SZQ6|Q9SZQ6_ARATH Putative uncharacterized protein F27B13.9... 125 2e-27 tr|O64568|O64568_ARATH Expressed protein (Putative uncharacteriz... 122 2e-26 tr|A9PGK0|A9PGK0_POPTR Putative uncharacterized protein OS=Popul... 121 3e-26 tr|A9PER7|A9PER7_POPTR Putative uncharacterized protein OS=Popul... 121 3e-26 tr|B7FME0|B7FME0_MEDTR Putative uncharacterized protein OS=Medic... 116 1e-24 tr|Q6ETP4|Q6ETP4_ORYSJ Os02g0176400 protein OS=Oryza sativa subs... 106 1e-21 tr|A2X1I9|A2X1I9_ORYSI Putative uncharacterized protein OS=Oryza... 106 1e-21 tr|B6TQQ7|B6TQQ7_MAIZE Putative uncharacterized protein OS=Zea m... 105 2e-21 tr|A9T257|A9T257_PHYPA Predicted protein (Fragment) OS=Physcomit... 62 2e-08 tr|A7SGM3|A7SGM3_NEMVE Predicted protein OS=Nematostella vectens... 57 7e-07 tr|A9RNL1|A9RNL1_PHYPA Predicted protein (Fragment) OS=Physcomit... 56 2e-06 tr|B3S393|B3S393_TRIAD Putative uncharacterized protein OS=Trich... 56 2e-06 tr|A7PN07|A7PN07_VITVI Chromosome chr14 scaffold_21, whole genom... 55 3e-06 tr|A9PDG2|A9PDG2_POPTR Putative uncharacterized protein OS=Popul... 55 3e-06 tr|Q9LVP2|Q9LVP2_ARATH Emb|CAB43660.1 (At3g29170) (Putative unch... 54 6e-06 tr|A2AMQ1|A2AMQ1_MOUSE Orthologue of H. sapiens chromosome 20 op... 54 8e-06 tr|B2RDM8|B2RDM8_HUMAN Chromosome 20 open reading frame 30, isof... 54 8e-06 tr|B5FZ43|B5FZ43_TAEGU Putative uncharacterized protein OS=Taeni... 54 1e-05 tr|A9SHT6|A9SHT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 54 1e-05 tr|Q68EX6|Q68EX6_XENLA MGC84111 protein OS=Xenopus laevis GN=MGC... 53 1e-05 tr|Q68EJ3|Q68EJ3_DANRE Novel protein (Zgc:101123) OS=Danio rerio... 53 1e-05 tr|A7E2V0|A7E2V0_DANRE Zgc:162251 protein OS=Danio rerio GN=zgc:... 53 1e-05 tr|Q6GM26|Q6GM26_XENLA MGC84021 protein OS=Xenopus laevis GN=MGC... 53 2e-05 tr|Q6DET5|Q6DET5_XENTR MGC89669 protein OS=Xenopus tropicalis GN... 53 2e-05 tr|Q28C04|Q28C04_XENTR Novel protein OS=Xenopus tropicalis GN=TE... 53 2e-05 tr|B5X9I3|B5X9I3_SALSA UPF0414 transmembrane protein C20orf30 ho... 53 2e-05
>tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 101
Score = 138 bits (347), Expect = 3e-31 Identities = 63/101 (62%), Positives = 73/101 (72%) Frame = +2
Query: 86 MAYVDRTFSITEDDFEGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGDRG 265 MAYVD FSITEDD G++ VHN PP+KE MM+NK+GGDRG Sbjct: 1 MAYVDHAFSITEDDSAGSYAVHNSPPIKEISLAVALLVFGTVGIVVGFIMMYNKIGGDRG 60
Query: 266 HGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 HG+FFAILG +LF+PGFYYTR+AYYAYKGYKGFSF+NIP V Sbjct: 61 HGIFFAILGGMLFIPGFYYTRLAYYAYKGYKGFSFSNIPPV 101
>tr|A5CB04|A5CB04_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030526 PE=4 SV=1 Length = 103
Score = 132 bits (332), Expect = 2e-29 Identities = 63/103 (61%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSI+++D E ++IVHNRPP+KE M++N+VGGD Sbjct: 1 MAYVDHAFSISDEDIMMETSYIVHNRPPIKEIALAVALLVFGTLGIILGILMVYNRVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 R HGLFFAILGA+LF+PGFYYTRIAYYAYKGYKGFSF+NIP V Sbjct: 61 RAHGLFFAILGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
>tr|Q207T6|Q207T6_9ASPA Putative uncharacterized protein OS=Gymnadenia conopsea PE=4 SV=1 Length = 103
Score = 132 bits (331), Expect = 2e-29 Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSI+++D E +++VHNRPPVKE M +N+ GGD Sbjct: 1 MAYVDHAFSISDEDIMMESSYVVHNRPPVKEIALAVALLVFGVLGIVLGIVMTYNRAGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 R HG+FFAILGAVLFLPGFYYTRIAYYAYKGY GFSFANIPAV Sbjct: 61 RAHGIFFAILGAVLFLPGFYYTRIAYYAYKGYTGFSFANIPAV 103
>tr|A9SRL6|A9SRL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_230563 PE=4 SV=1 Length = 101
Score = 128 bits (322), Expect = 2e-28 Identities = 65/101 (64%), Positives = 69/101 (68%) Frame = +2
Query: 86 MAYVDRTFSITEDDFEGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGDRG 265 MAYVD TFSI +D GTFIVHN PPVKE M KVGGD G Sbjct: 1 MAYVDHTFSIRDDVSGGTFIVHNGPPVKEIALAVTLLALGTLGIIFGVFMAAYKVGGDTG 60
Query: 266 HGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 HG+ FAILG +LFLPGFYYTRIAYYAYKGYKGFSF+NIPAV Sbjct: 61 HGIAFAILGTLLFLPGFYYTRIAYYAYKGYKGFSFSNIPAV 101
>tr|Q9SZQ6|Q9SZQ6_ARATH Putative uncharacterized protein F27B13.90 (At4g29850) (Putative uncharacterized protein AT4g29850) OS=Arabidopsis thaliana GN=AT4g29850 PE=4 SV=1 Length = 103
Score = 125 bits (315), Expect = 2e-27 Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSIT++D E ++ V+NRPPVKE M +N+VGGD Sbjct: 1 MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 RGHG+FF +LG +LF+PGFYYTRIAYYAYKGYKGFSF+NIP V Sbjct: 61 RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
>tr|O64568|O64568_ARATH Expressed protein (Putative uncharacterized protein At2g19350) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g19350 PE=2 SV=1 Length = 103
Score = 122 bits (305), Expect = 2e-26 Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDFE-GT-FIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSI+++D GT + V NRPPVKE M +N+VGGD Sbjct: 1 MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 RGHG+FF +LG +LF+PGFYYTRIAYYAYKGYKGFSF+NIP+V Sbjct: 61 RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103
>tr|A9PGK0|A9PGK0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 103
Score = 121 bits (304), Expect = 3e-26 Identities = 59/103 (57%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSIT++D E ++ V+N+PP+KE M +N VGGD Sbjct: 1 MAYVDHAFSITDEDLMLETSYAVNNKPPIKEIALAISLLVFGVAGIVLGIFMTYNSVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 R HGLFFAILG VLF+PGFYYTRIAY+AYKGY GFSF+NIP V Sbjct: 61 RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYTGFSFSNIPPV 103
>tr|A9PER7|A9PER7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 103
Score = 121 bits (304), Expect = 3e-26 Identities = 59/103 (57%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSIT++D E ++ V+N+PP+KE M +N VGGD Sbjct: 1 MAYVDHAFSITDEDLMVETSYAVNNKPPIKEIALAISLLVFGVAGIVLGIFMTYNSVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 R HGLFFAILG VLF+PGFYYTRIAY+AYKGY GFSF+NIP V Sbjct: 61 RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYTGFSFSNIPPV 103
>tr|B7FME0|B7FME0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 103
Score = 116 bits (291), Expect = 1e-24 Identities = 60/103 (58%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSITEDDFE-GT-FIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSI+++D GT + V+N+PPVKE M +N VGGD Sbjct: 1 MAYVDHAFSISDEDIMIGTSYTVNNKPPVKEIALAVSLLVFGFLSIIIGSLMAYNHVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 HGLFFAILG +LF+PGFYYTRIAYYAYKGYKGFSF+NIP V Sbjct: 61 TVHGLFFAILGMLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
>tr|Q6ETP4|Q6ETP4_ORYSJ Os02g0176400 protein OS=Oryza sativa subsp. japonica GN=P0504A05.1 PE=4 SV=1 Length = 103
Score = 106 bits (265), Expect = 1e-21 Identities = 57/103 (55%), Positives = 64/103 (62%), Gaps = 2/103 (1%) Frame = +2
Query: 86 MAYVDRTFSIT-EDDFEGTFIVHNR-PPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 259 MAYVD FSI+ EDD G + R PVKE M N VGGD Sbjct: 1 MAYVDHAFSISDEDDLVGGAVGGPRGAPVKEIAFAAALLAFGALGAIGGVLMAANNVGGD 60
Query: 260 RGHGLFFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 388 R HG+FF ILG V+F+PGFYYTRIAYYAYKGYKGFSF+NIP + Sbjct: 61 RAHGIFFMILGIVMFIPGFYYTRIAYYAYKGYKGFSFSNIPPI 103
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