DK960351
Clone id TST39A01NGRL0007_C23
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
AAAAGGTCATAATTATGTGTGTAGTATGCGAATGTGGATCCATATATAGGTGGGATCGAA
GACTCAAAAATACAACATCTTGCTGATGACGAGCCATATAAAGAAAGAAAGCCACACCCC
AACTTTAACAGAGATCCAAGACTTAAAACAATGGTGGACAAATCAGGTTGATCATGTATT
CAAATAGAGCCAAATCCTAATACTGGCGCCCGGAATCACAAGTAATACTATGTAAATAGC
CCACATTGAATGAGAAATCAGAAAAAAATTAGCTTTCCTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P13280
Definition sp|P13280|GLYG_RABIT Glycogenin-1 OS=Oryctolagus cuniculus
Align length 72
Score (bit) 32.3
E-value 0.75
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960351|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C23, 5'
(279 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P13280|GLYG_RABIT Glycogenin-1 OS=Oryctolagus cuniculus GN=GY... 32 0.75
sp|P23293|BUR1_YEAST Serine/threonine-protein kinase BUR1 OS=Sac... 29 6.4

>sp|P13280|GLYG_RABIT Glycogenin-1 OS=Oryctolagus cuniculus GN=GYG1
PE=1 SV=3
Length = 333

Score = 32.3 bits (72), Expect = 0.75
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2

Query: 38 IHI*VGSKTQKYNILLMTSHIKKESHTPTLTEIQDLKQWWTNQVDHVFK*SQILILAP-G 214
+H +K Y T ++ E H PT+T Q L WW +F S + +L G
Sbjct: 211 VHFLGQTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWW-----DIFTTSVVPLLQQFG 265

Query: 215 ITSNTM*IAHIE 250
+ +T H+E
Sbjct: 266 LVQDTCSYQHVE 277


>sp|P23293|BUR1_YEAST Serine/threonine-protein kinase BUR1
OS=Saccharomyces cerevisiae GN=SGV1 PE=1 SV=1
Length = 657

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1

Query: 43 YIGGIEDSKIQHLADDEPYKE----RKPHPNFNRDPRLKTMVDKSG*SCIQIEPNPNTGA 210
Y G +S+ ++ +D Y KP NFNR P+ + + + + I NP+ G+
Sbjct: 537 YQGNSNESRYKNSPNDSRYHNPRYVNKPETNFNRQPQKYSRQESN--APINKNYNPSNGS 594

Query: 211 RN 216
RN
Sbjct: 595 RN 596


tr_hit_id B1YHF8
Definition tr|B1YHF8|B1YHF8_EXIS2 Amino acid permease-associated region OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
Align length 28
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960351|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_C23, 5'
(279 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1YHF8|B1YHF8_EXIS2 Amino acid permease-associated region OS=... 33 7.2

>tr|B1YHF8|B1YHF8_EXIS2 Amino acid permease-associated region
OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=Exig_0204 PE=4 SV=1
Length = 477

Score = 33.1 bits (74), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1

Query: 150 CFKSWISVKVGVWLSFFIWLVISKMLYF 67
C ++K+ W++FFIWL I +LYF
Sbjct: 425 CLFLMFNLKLETWIAFFIWLAIGLVLYF 452