DK960352 |
Clone id |
TST39A01NGRL0007_C24 |
Library |
TST39 |
Length |
687 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_C24. 5' end sequence. |
Accession |
DK960352 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1223Contig1 |
Sequence |
ATGGCTAGCAGAGCTCAAGCTGATGCTGATGCATTTGAGCTACTGAATTATATGCCGACC CACATCTCCCTCCCAAGGCCATACTGCTTTCGCCCACGCGAGGCCTTACCGTCACCCCAG ATGGAAGACATTGCAGCTGCGCCTCCCCCCCTATCTCCACCTCTTTTTACAAATTTTCAG TGAATCTGTCCATGCCGCTGAGCTGCAGCTTGTGGAGGCTCTCCAACCTCTGTCTAACCT CGTGGTGGACCGCCTGGCTCGGTCTCAGCTTTGTCCCGCCCCCAACCCTTCCACTAGTCT GCCACAAAATCACTCAGCGGCGGTTTATGTTGCCAAATCAGATGGCTGAAAAGGAAGCAC AAGCCCTCATTCGAACTCTTGCACAAGGGAATTCCAGTACTGGCTACTTGATGCAACTTC GAATGGAGGCAGAATCCAGTGTCCCAATGCCAATCCTGTCATCTGTGACATCAGTGCTTC AAGACCCTGCATGCCATCTCTCACACGTCAATCTCTGTTCTTCTTCTGTGCCTGATGGAA CCAGCATTCTCACAATTCATTCTAATACATCGTTGCAGGCACTTGCTGCAAATACATCCT CGTCAAACTTGGGTGTGGGCATCAGGAGTGCCACTGACTTGAAGCTAATTCTTCTGGACT CTCAGGCCACACATTCCAATGCCTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q497L8 |
Definition |
sp|Q497L8|S22AG_MOUSE Solute carrier family 22 member 16 OS=Mus musculus |
Align length |
74 |
Score (bit) |
33.9 |
E-value |
0.83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960352|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C24, 5' (687 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q497L8|S22AG_MOUSE Solute carrier family 22 member 16 OS=Mus ... 34 0.83 sp|O46202|A62F_DROME Accessory gland protein Acp62F OS=Drosophil... 33 1.9 sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizos... 32 2.4 sp|Q5AS80|FYV10_EMENI Protein fyv10 OS=Emericella nidulans GN=fy... 32 3.2 sp|Q8BWQ5|DCLK3_MOUSE Serine/threonine-protein kinase DCLK3 OS=M... 32 3.2 sp|P59044|NALP6_HUMAN NACHT, LRR and PYD domains-containing prot... 32 4.1 sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus seroti... 32 4.1 sp|A1CZJ5|FYV10_NEOFI Protein fyv10 OS=Neosartorya fischeri (str... 31 5.4 sp|Q66KG0|S22AG_XENLA Solute carrier family 22 member 16 OS=Xeno... 31 7.1 sp|Q9NZ56|FMN2_HUMAN Formin-2 OS=Homo sapiens GN=FMN2 PE=1 SV=4 31 7.1 sp|P45609|PHOR_SHIDY Phosphate regulon sensor protein phoR OS=Sh... 30 9.2 sp|A2R9P6|FYV10_ASPNC Protein fyv10 OS=Aspergillus niger (strain... 30 9.2
>sp|Q497L8|S22AG_MOUSE Solute carrier family 22 member 16 OS=Mus musculus GN=Slc22a16 PE=2 SV=1 Length = 649
Score = 33.9 bits (76), Expect = 0.83 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +3
Query: 180 VNLSMPLSCSLWRLSNLCLTSWWTAWLGLSFVPPPTLPLVCHKITQRRFMLPNQMAEKEA 359 +N + L L++ L +WW + L V P + L C + + F L ++ KEA Sbjct: 246 LNTFFAIGAMLVALASYLLKTWWLYQIILCIVTTPFI-LCCWMLPETPFWLLSEGRYKEA 304
Query: 360 QALIRTLAQGNSST 401 Q + T+A N S+ Sbjct: 305 QGTVDTMAVWNKSS 318
>sp|O46202|A62F_DROME Accessory gland protein Acp62F OS=Drosophila melanogaster GN=Acp62F PE=2 SV=1 Length = 115
Score = 32.7 bits (73), Expect = 1.9 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +2
Query: 407 LDATSNGGRIQCPNANPVICDISASRPCM 493 +D T+NG + +CP A P C+ S + PC+ Sbjct: 32 VDCTANGTQTECPVACPETCEYSGNGPCV 60
>sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1 Length = 1236
Score = 32.3 bits (72), Expect = 2.4 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%) Frame = +3
Query: 135 SCASPP-ISTSFYKFSVNLSMPL-SCSLWRLSNLCLTSWWTAWLGLSFVPPPTLPLVCHK 308 S +SP IS+S S LS P S S +S+ + S ++ L S T+P+ Sbjct: 607 STSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSI---STIPISSSL 663
Query: 309 ITQRRFMLPNQMAEKEAQALIRTLAQGNSSTGYLMQLRMEAESSVPMPILSSVTSVLQDP 488 T ++P+ TL +SS + + + SS P+P SS+ S Sbjct: 664 STYSSSVIPSSS----------TLVSSSSSL-IVSSSPVASSSSSPIPSSSSLVSTYSAS 712
Query: 489 ACHLSHVNLC------SSSVP---DGTSILTIHSN-------TSLQALAANTSSSNLGVG 620 +++H +L SS++P + ++++T S+ TS A+ ++T+ SN+ Sbjct: 713 LSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIVSSTTVSNISSN 772
Query: 621 IRSAT 635 + SAT Sbjct: 773 LPSAT 777
>sp|Q5AS80|FYV10_EMENI Protein fyv10 OS=Emericella nidulans GN=fyv10 PE=3 SV=2 Length = 406
Score = 32.0 bits (71), Expect = 3.2 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +3
Query: 456 LSSVTSVLQDPACHLSHVNLCSSSVPDGTSILTIHSNTSLQALAANTSSSN 608 LS+ S L+ PACH ++ + S+S TS+ I S T L LA N +N Sbjct: 298 LSAGLSALKTPACHSAYTSSSSNSHSTATSVCPICS-TELNELARNLPYAN 347
>sp|Q8BWQ5|DCLK3_MOUSE Serine/threonine-protein kinase DCLK3 OS=Mus musculus GN=Dclk3 PE=2 SV=1 Length = 619
Score = 32.0 bits (71), Expect = 3.2 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Frame = -2
Query: 428 LHSKLHQVASTGIPLCKSSNEGLCFLFSHLIWQHKPPLSDFVAD*WKG----WGRDKAET 261 L S+L G C + + S + +H+ S +A K W R K E+ Sbjct: 38 LRSRLPSKLLKGSHRCGEAGSYSAEMESKAVSRHQGKTSTVLAPEDKARAQKWVRGKQES 97
Query: 260 EPGGPPRG*TEVGEPPQAAAQRH 192 EPGGPP E A+ ++H Sbjct: 98 EPGGPPSPGAATQEETHASGEKH 120
>sp|P59044|NALP6_HUMAN NACHT, LRR and PYD domains-containing protein 6 OS=Homo sapiens GN=NLRP6 PE=2 SV=1 Length = 892
Score = 31.6 bits (70), Expect = 4.1 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3
Query: 375 TLAQGNSSTGYLMQLRMEAESSVPMPILSSVTSVLQDPACHLSHVNLCSSSVPD 536 +L G+SS G QL P +L + + DP CHLS + L +PD Sbjct: 697 SLGGGSSSQGTTKQL--------PASLLHPLFQAMTDPLCHLSSLTLSHCKLPD 742
>sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1 Length = 576
Score = 31.6 bits (70), Expect = 4.1 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +3
Query: 66 LPPKAILLSPTRGLTVTPDGRHCSCASPPISTSFYKFSVNLSMPL 200 LPP I S L +T D CS +S P ST+ + F N + PL Sbjct: 335 LPPNPIEASTVTVLGITSDFYQCSISSLPFSTAPFGFFPNPTYPL 379
>sp|A1CZJ5|FYV10_NEOFI Protein fyv10 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=fyv10 PE=3 SV=2 Length = 406
Score = 31.2 bits (69), Expect = 5.4 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +3
Query: 456 LSSVTSVLQDPACHLSHVNLCSSSVPDGTSILTIHSNTSLQALAAN 593 LS+ S L+ P+CH ++ + S+S+ TS+ I S T L LA N Sbjct: 298 LSAGLSALKTPSCHSAYTSSSSNSLSTATSVCPICS-TELNELARN 342
>sp|Q66KG0|S22AG_XENLA Solute carrier family 22 member 16 OS=Xenopus laevis GN=slc22a16 PE=2 SV=2 Length = 566
Score = 30.8 bits (68), Expect = 7.1 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = +3
Query: 219 LSNLCLTSWWTAWLGLSFVPPPTLPLVCHKITQRRFMLPNQMAEKEAQALIRTLAQGN-- 392 L + +WW + LS P + L C + + F L +Q KE + LIRT+ + N Sbjct: 252 LVGFLVRTWWIYQIILSLTTLPFV-LCCWMLPETPFWLYSQGKYKEVEKLIRTIEKWNKI 310
Query: 393 SSTGYLMQLRMEAESSVPMP 452 S+ L +L E+ V P Sbjct: 311 STPCKLSELCPAQETHVDQP 330
>sp|Q9NZ56|FMN2_HUMAN Formin-2 OS=Homo sapiens GN=FMN2 PE=1 SV=4 Length = 1722
Score = 30.8 bits (68), Expect = 7.1 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Frame = +3
Query: 57 DPHLPPKAILLSPTRGLTVTPDGRHCSCASPP--ISTSF---YKFSVNLSMPLSCSLWRL 221 D H P ++I P + G+ + PP IST F ++ SV+ + SC++ Sbjct: 799 DSHQPTQSISQPPPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSP 858
Query: 222 SNLCLTSWWTAWLGLSFVPPPTLPL 296 L T ++ GL VPPP PL Sbjct: 859 PPLPCTESSSSMPGLGMVPPPPPPL 883
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q54G18 |
Definition |
tr|Q54G18|Q54G18_DICDI Leucine-rich repeat-containing protein (LRR) OS=Dictyostelium discoideum |
Align length |
152 |
Score (bit) |
36.2 |
E-value |
2.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960352|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_C24, 5' (687 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q54G18|Q54G18_DICDI Leucine-rich repeat-containing protein (L... 36 2.0 tr|A9V0A3|A9V0A3_MONBE Predicted protein OS=Monosiga brevicollis... 36 2.0 tr|Q2TYF8|Q2TYF8_ASPOR Predicted transporter OS=Aspergillus oryz... 36 2.0 tr|B8NXY6|B8NXY6_ASPFL Hexose transporter, putative OS=Aspergill... 36 2.0 tr|Q5BHH5|Q5BHH5_EMENI Putative uncharacterized protein OS=Emeri... 36 2.6 tr|B6HI37|B6HI37_PENCH Pc21g10190 protein OS=Penicillium chrysog... 36 2.6 tr|Q53Q57|Q53Q57_ORYSJ Rac GTPase activating protein 1 OS=Oryza ... 35 3.4 tr|B6NEA4|B6NEA4_BRAFL Putative uncharacterized protein OS=Branc... 33 3.5 tr|B4MWC5|B4MWC5_DROWI GK14908 OS=Drosophila willistoni GN=GK149... 35 4.5 tr|A7F3U6|A7F3U6_SCLS1 Putative uncharacterized protein OS=Scler... 35 4.5 tr|Q9Z5B8|Q9Z5B8_STRCO Putative transferase OS=Streptomyces coel... 35 5.9 tr|A6FNB6|A6FNB6_9RHOB Succinyl-diaminopimelate desuccinylase OS... 35 5.9 tr|Q4S0C8|Q4S0C8_TETNG Chromosome 2 SCAF14781, whole genome shot... 34 7.7 tr|A0Y1E5|A0Y1E5_9GAMM Putative glutamate dehydrogenase OS=Alter... 34 7.7 tr|O81103|O81103_PRUAR Polyphenol oxidase OS=Prunus armeniaca PE... 34 7.7 tr|B8LEX7|B8LEX7_THAPS Predicted protein OS=Thalassiosira pseudo... 34 7.7
>tr|Q54G18|Q54G18_DICDI Leucine-rich repeat-containing protein (LRR) OS=Dictyostelium discoideum GN=gacW PE=4 SV=1 Length = 1115
Score = 36.2 bits (82), Expect = 2.0 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 11/152 (7%) Frame = +3
Query: 195 PLSCSLWRLSNLCLTSWWTAW-----LGLSFVPPPTLPLVCHKITQRRFMLPNQMAEKEA 359 PLS LW + NL + + SF + L T + N E Sbjct: 167 PLSSILWDIENLYPFNQVREFNLAEIYQYSFTDLKAILLSLSYNTYFQSFQSNGKLSNED 226
Query: 360 QALIRTLAQGNSSTGYLMQLRMEAESSVPMPILSSVTSVLQDPACHLSHVNLCSSSVPD- 536 L+ + + NSS L QL + + PI++ + +V ++ A HLSH+NL ++S+ + Sbjct: 227 LNLLAEVFKENSS---LQQLTITNSQASKEPIITLLQNVAENKALHLSHINLNNNSLENK 283
Query: 537 -----GTSILTIHSNTSLQALAANTSSSNLGV 617 G+SI T SN NTS S G+ Sbjct: 284 GILTLGSSIQTF-SNGLTYLNIENTSCSGKGL 314
>tr|A9V0A3|A9V0A3_MONBE Predicted protein OS=Monosiga brevicollis GN=25739 PE=4 SV=1 Length = 670
Score = 36.2 bits (82), Expect = 2.0 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = +3
Query: 309 ITQRRFMLPNQMAEKEA-QALIRTLAQGNSSTGYLMQLRMEAESSVPMPILSSVTSVLQD 485 +T R L N + E + ++ L Q NS T +++ M + S+ LQ Sbjct: 429 VTARTLDLTNNLLETPGCEQAMKALTQANSITSLVLKTNM-----IEFDACESIAVALQA 483
Query: 486 PACHLSHVNLCSSSVPD 536 P CHL H++L ++ + D Sbjct: 484 PLCHLQHLDLYNNYIGD 500
>tr|Q2TYF8|Q2TYF8_ASPOR Predicted transporter OS=Aspergillus oryzae GN=AO090103000267 PE=4 SV=1 Length = 531
Score = 36.2 bits (82), Expect = 2.0 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +2
Query: 59 PTSPSQGHTAFAHARPYRHPRWKTLQLRLPPYLHLFLQIFSESVHAAELQLVEALQPLS 235 P P++GH FAH R P WK +R Y+++ + I + + + + ++ LQ LS Sbjct: 16 PVKPTKGHFLFAHQEFKRVPWWKRKNMR-TLYIYIVILIMTNTANGFDGSMMNGLQTLS 73
>tr|B8NXY6|B8NXY6_ASPFL Hexose transporter, putative OS=Aspergillus flavus NRRL3357 GN=AFLA_009560 PE=4 SV=1 Length = 531
Score = 36.2 bits (82), Expect = 2.0 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +2
Query: 59 PTSPSQGHTAFAHARPYRHPRWKTLQLRLPPYLHLFLQIFSESVHAAELQLVEALQPLS 235 P P++GH FAH R P WK +R Y+++ + I + + + + ++ LQ LS Sbjct: 16 PVKPTKGHFLFAHQEFKRVPWWKRKNMR-TLYIYIVILIMTNTANGFDGSMMNGLQTLS 73
>tr|Q5BHH5|Q5BHH5_EMENI Putative uncharacterized protein OS=Emericella nidulans GN=AN0013.2 PE=4 SV=1 Length = 533
Score = 35.8 bits (81), Expect = 2.6 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +2
Query: 59 PTSPSQGHTAFAHARPYRHPRWKTLQLRLPPYLHLFLQIFSESVHAAELQLVEALQPLS 235 P P++GH FAH R P WK +R Y+++ + I + + + + ++ LQ LS Sbjct: 16 PKKPAKGHFFFAHREFARVPWWKRKNMR-KLYIYIIILILTNTANGFDGSMMNGLQTLS 73
>tr|B6HI37|B6HI37_PENCH Pc21g10190 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc21g10190 PE=4 SV=1 Length = 540
Score = 35.8 bits (81), Expect = 2.6 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +2
Query: 59 PTSPSQGHTAFAHARPYRHPRWKTLQLRLPPYLHLFLQIFSESVHAAELQLVEALQPLS 235 P P++GH FAH R P WK +R Y+++ + I + + + + ++ LQ LS Sbjct: 16 PVKPTKGHFFFAHKEFERVPWWKRKNMR-TLYIYIVILILTNTANGFDGSMMNGLQTLS 73
>tr|Q53Q57|Q53Q57_ORYSJ Rac GTPase activating protein 1 OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 444
Score = 35.4 bits (80), Expect = 3.4 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Frame = -1
Query: 261 RARRSTTRLDRGWRASTSCSSAAWTDSLKICKKR-----WR*GGRRSCNVFH 121 R RR R R WR SC + + +++ C++ WR GGRR C+ +H Sbjct: 25 RRRRRRRRGGRSWRCCLSCCGSRCSGAVR-CRRAAASAGWRLGGRRMCSTWH 75
>tr|B6NEA4|B6NEA4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_94117 PE=4 SV=1 Length = 704
Score = 33.5 bits (75), Expect(2) = 3.5 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = -3
Query: 541 VPSGTEEEQRLTCERWHAGS*STDVTDDRIGIGTLDSASIRSCIK*PVLEFPCARVRMRA 362 VP GT T +R TDV DD IG G L+ A++ + + CA +++R Sbjct: 319 VPEGTTTSPNHTRKRDE----DTDVHDDNIGEGVLEVATVLGAL---LFAVSCAVIKVRL 371
Query: 361 CASFSAI 341 C+ +A+ Sbjct: 372 CSQAAAV 378
Score = 20.8 bits (42), Expect(2) = 3.5 Identities = 7/26 (26%), Positives = 12/26 (46%) Frame = -1
Query: 687 RRHWNVWPESPEELASSQWHS*CPHP 610 +R W +P++ S W + P P Sbjct: 270 KRPWETGSSTPDQEDKSPWETGSPTP 295
>tr|B4MWC5|B4MWC5_DROWI GK14908 OS=Drosophila willistoni GN=GK14908 PE=4 SV=1 Length = 163
Score = 35.0 bits (79), Expect = 4.5 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%) Frame = +3
Query: 330 LPNQMAEKEAQALIRTLAQGNSSTGYLMQLRMEAESSVPMPILSSVTSVLQDPACHLSHV 509 LP Q E + R N T L+ L + +P P++ ++ D C +SH+ Sbjct: 62 LPQQYYEINNNSCYRQNLNQNQQT--LLPLPLPLPLPLPPPLIYPCRNLFPD-GCDISHL 118
Query: 510 NLCSSSVPDGTSI-LTIHSNTSLQALAANTSSSNLGVGIRSAT 635 CSSS T+ SN+ L + ++ +SSS+ + S T Sbjct: 119 TCCSSSTTGNTNTNNNFSSNSPLSSSSSPSSSSSSSSSLSSYT 161
>tr|A7F3U6|A7F3U6_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_11942 PE=4 SV=1 Length = 607
Score = 35.0 bits (79), Expect = 4.5 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +2
Query: 209 LVEALQPLSNLVVDRLARSQLCPAPNPSTSLPQNHSAAVYVAKSDG*KGSTSPHSNSCTR 388 + E ++P N++ A S PN S LP N ++ A+S+ P S+S T Sbjct: 468 IAECVEP--NVIQSIHAASVFRSRPNLSEHLPSNPASPTKSAQSNYSPPGLCPSSSSPTA 525
Query: 389 EFQYWLLDATSNGGRI 436 Y+ LDA SN G + Sbjct: 526 SANYYDLDAVSNSGEL 541
|