DK960353 |
Clone id |
TST39A01NGRL0007_D01 |
Library |
TST39 |
Length |
682 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_D01. 5' end sequence. |
Accession |
DK960353 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL859Contig1 |
Sequence |
AGATCCAAGCGTCGACGTCTACATTAACCCTGCCTAAATATCCTCGGCCACACCATATAC CCCAGCTGCCATTCCTTTCCTCAAGTACTCAATCAGGCCGTTATCAATATTGACAACCAT CGACGTTGCACCTCAGCTTCTCCTTTGCGCCACCACCATCGATTAAATTGCCATTTTCCA TACACCTTCTCCATTGATTATACTACAGTCCTTCCTCTGACATGTGACCTCAATGCATCC TCATGCCCTAATTCTCTGCTAGACCTTACACTGTTGTTTACAGCATGCTTCCTTCCTCCT CTTCCCAGCTCGCCAGATATGGCCACATTAACCATTACAAGAAATTCTGGCTGCTGCAGA GTACCCAGCTTGAGAAACAAGAGCAGAGCTCCTCCTCGTCCACTCTCAGCTTGGGCAGCT CGAGCTCGACTGCCGCACCATCCGGCCATGCCGTCAAGGAAATCAGCAGAACTCCCTCCC TTGTTGCTCAGCATATGAATGGAGATACCCAACATCATGCAATTATTGGACCTCATTATG GAATTTGCAGGATAGATATGGCAGCCACCACCAGCAGTAGTAGAGGCAACAATGGATGCT CTGCTCCGACCTACTGCCCCAATGAGCCAGCTAATTTAATGAGTCCTTACTTCACGAACA CACCAGGATATGGTCTCCAAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P83093 |
Definition |
sp|P83093|STIM2_MOUSE Stromal interaction molecule 2 OS=Mus musculus |
Align length |
77 |
Score (bit) |
33.9 |
E-value |
0.83 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7F168 |
Definition |
tr|Q7F168|Q7F168_ORYSJ Os07g0142300 protein OS=Oryza sativa subsp. japonica |
Align length |
79 |
Score (bit) |
38.1 |
E-value |
0.53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960353|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_D01, 5' (682 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7F168|Q7F168_ORYSJ Os07g0142300 protein OS=Oryza sativa subs... 38 0.53 tr|B8B761|B8B761_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.53 tr|Q6G251|Q6G251_BARHE Putative uncharacterized protein OS=Barto... 29 0.62 tr|Q1DZT7|Q1DZT7_COCIM Predicted protein OS=Coccidioides immitis... 37 0.90 tr|B6K128|B6K128_SCHJP Predicted protein OS=Schizosaccharomyces ... 37 1.2 tr|A4H544|A4H544_LEIBR Putative uncharacterized protein OS=Leish... 36 2.0 tr|Q1DBJ6|Q1DBJ6_MYXXD Transcriptional regulator, LysR family OS... 36 2.6 tr|Q5MJ50|Q5MJ50_GIALA GARP-like protein 3 OS=Giardia lamblia GN... 36 2.6 tr|A8B9X4|A8B9X4_GIALA GARP-like protein 3 OS=Giardia lamblia AT... 36 2.6 tr|B8B787|B8B787_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.4 tr|Q9XDH2|Q9XDH2_MYCTU Proline-rich mucin homolog OS=Mycobacteri... 35 4.5 tr|Q002B3|Q002B3_TOBAC Cytokinesis negative regulator RCP1 OS=Ni... 35 4.5 tr|B3K356|B3K356_9BACI GCN5-related N-acetyltransferase OS=Geoba... 35 5.8 tr|Q8H4K4|Q8H4K4_ORYSJ Os07g0142200 protein OS=Oryza sativa subs... 35 5.8 tr|Q0IRJ8|Q0IRJ8_ORYSJ Os11g0623700 protein (Fragment) OS=Oryza ... 35 5.8 tr|A3BGH3|A3BGH3_ORYSJ Putative uncharacterized protein OS=Oryza... 35 5.8 tr|A2YI29|A2YI29_ORYSI Putative uncharacterized protein OS=Oryza... 35 5.8 tr|B6KHC6|B6KHC6_TOXGO PAN domain-containing protein OS=Toxoplas... 31 9.0 tr|Q8BIM2|Q8BIM2_MOUSE Putative uncharacterized protein (Fragmen... 34 9.9 tr|B7ZN44|B7ZN44_MOUSE Putative uncharacterized protein OS=Mus m... 34 9.9 tr|B2RQE3|B2RQE3_MOUSE Stim2 protein OS=Mus musculus GN=Stim2 PE... 34 9.9 tr|A5CVE4|A5CVE4_MOUSE Stromal interaction molecule 2 OS=Mus mus... 34 9.9 tr|Q2IHC7|Q2IHC7_ANADE Putative uncharacterized protein OS=Anaer... 34 9.9 tr|Q096M4|Q096M4_STIAU CheW protein OS=Stigmatella aurantiaca DW... 34 9.9 tr|Q4FX38|Q4FX38_LEIMA Putative uncharacterized protein OS=Leish... 34 9.9 tr|B6KES5|B6KES5_TOXGO Putative uncharacterized protein OS=Toxop... 34 9.9 tr|B5WY87|B5WY87_COLGR Putative uncharacterized protein (Fragmen... 34 9.9
>tr|Q7F168|Q7F168_ORYSJ Os07g0142300 protein OS=Oryza sativa subsp. japonica GN=OJ1351_C05.123 PE=4 SV=1 Length = 190
Score = 38.1 bits (87), Expect = 0.53 Identities = 25/79 (31%), Positives = 36/79 (45%) Frame = +1
Query: 247 PNSLLDLTLLFTACFLPPLPSSPDMATLTITRNSGCCRVPSLRNKSRAPPRPLSAWAARA 426 PN+ L LPP+P+ P + T+ VP++ + PP P A Sbjct: 74 PNTALPPMPAVPKVALPPMPAVPAVPTVPAVTVPPMPAVPAVP-AATLPPMPAVPAVPAA 132
Query: 427 RLPHHPAMPSRKSAELPPL 483 LP PAMP+ +A LPP+ Sbjct: 133 SLPPMPAMPAVPNAALPPM 151
>tr|B8B761|B8B761_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24860 PE=4 SV=1 Length = 190
Score = 38.1 bits (87), Expect = 0.53 Identities = 25/79 (31%), Positives = 36/79 (45%) Frame = +1
Query: 247 PNSLLDLTLLFTACFLPPLPSSPDMATLTITRNSGCCRVPSLRNKSRAPPRPLSAWAARA 426 PN+ L LPP+P+ P + T+ VP++ + PP P A Sbjct: 74 PNTALPPMPAVPKVALPPMPAVPAVPTVPAVTVPPMPAVPAVP-AATLPPMPAVPAVPAA 132
Query: 427 RLPHHPAMPSRKSAELPPL 483 LP PAMP+ +A LPP+ Sbjct: 133 SLPPMPAMPAVPNAALPPM 151
>tr|Q6G251|Q6G251_BARHE Putative uncharacterized protein OS=Bartonella henselae GN=BH14150 PE=4 SV=1 Length = 313
Score = 29.3 bits (64), Expect(2) = 0.62 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = +3
Query: 51 HHIPQLPFLSSSTQSGRYQY*QPSTLHLSFSFAPPPSIKLPFSIHLLH----*LYYSPSS 218 HH PQ P + S + P TLHLS S + PP + L S H L+ SPS+ Sbjct: 30 HHSPQPPLTLHPSLSTSHP--PPLTLHLSPSTSHPPPLTLHLSPSTSHPPPLTLHLSPST 87
Query: 219 DM*PQCIL 242 P L Sbjct: 88 SHPPPLTL 95
Score = 27.7 bits (60), Expect(2) = 0.62 Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 14/141 (9%) Frame = +1
Query: 214 PLTCDLNASSCPNSLLDLTLLFTACFLPPLPSSPDMATLTITRNSGCCRVPSLRNKSRAP 393 PLT L+ S+ L L L + PPL P ++T P Sbjct: 120 PLTLHLSPSTSHPPSLILRLSLSTPHSPPLTLHPSLST---------------------P 158
Query: 394 PRPLSAWAARARLPHHPAM---PSRKSAELPPLLLSI*MEIPNIMQLL-----------D 531 P + PH P + PS + PPL+L IP+ L+ Sbjct: 159 HSPSLILHLSSSTPHSPPLTLHPSLSISHPPPLILHPSFSIPHSSSLILHLSSSTPHSPS 218
Query: 532 LIMEFAG*IWQPPPAVVEATM 594 L + + PPP +++ ++ Sbjct: 219 LTLHLSSSTSHPPPLILQRSL 239
>tr|Q1DZT7|Q1DZT7_COCIM Predicted protein OS=Coccidioides immitis GN=CIMG_04176 PE=4 SV=1 Length = 116
Score = 37.4 bits (85), Expect = 0.90 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = +1
Query: 226 DLNASSCPNSLLDLTLLFTACFLPPLPSSPDMATLTITRNSGCCRVPSLRNKSRAPPRP- 402 D CP++ LT+ T C LP L + + + + CR PS R + A P P Sbjct: 21 DEGTVGCPSAQCSLTVPLTNCELPVLDGYKGSKSFPM-QFTNTCRPPSTRPLNNARPNPS 79
Query: 403 LSAWAARARLPHHPAMPSRKSAELPPLLLSI 495 AWA + A P + ++ PL SI Sbjct: 80 TEAWAWANHESYISATPMHRPSDFRPLRSSI 110
>tr|B6K128|B6K128_SCHJP Predicted protein OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_02750 PE=4 SV=1 Length = 1138
Score = 37.0 bits (84), Expect = 1.2 Identities = 23/59 (38%), Positives = 27/59 (45%) Frame = +1
Query: 79 PQVLNQAVINIDNHRRCTSASPLRHHHRLNCHFPYTFSIDYTTVLPLTCDLNASSCPNS 255 P V+N AV+N N S L L HF YTF DY +L C+ S PNS Sbjct: 846 PNVVNSAVLNSFNLATAIDVSSLASFDTLFLHFDYTFLEDY--ILAYLCESLRSFLPNS 902
>tr|A4H544|A4H544_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis GN=LbrM07_V2.1010 PE=4 SV=1 Length = 1095
Score = 36.2 bits (82), Expect = 2.0 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 3/98 (3%) Frame = +1
Query: 190 SIDYTTVLPLTCDLNASSCPNSLLDLTLLFTACFLPP---LPSSPDMATLTITRNSGCCR 360 S+ + PL + +S P D+T T+C PP LP+S A L T +S Sbjct: 772 SLPHAPKAPLLSSMTLASAPPITADITP--TSCAAPPSVMLPASTPKAPLVSTLHS---- 825
Query: 361 VPSLRNKSRAPPRPLSAWAARARLPHHPAMPSRKSAEL 474 + APP P+SAW P ++P+ + + + Sbjct: 826 ---TGGPTAAPPAPVSAWDGLPPPPRPSSIPTAEKSHV 860
>tr|Q1DBJ6|Q1DBJ6_MYXXD Transcriptional regulator, LysR family OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_1726 PE=4 SV=1 Length = 293
Score = 35.8 bits (81), Expect = 2.6 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%) Frame = -3
Query: 632 SWLIGAVGRSRASIVASTTAGGGCHIYPANSIMRSNNCM----------MLGISIHMLSN 483 +W IG S AS+ A+ +AG G + PA+S+ + + L ++++ SN Sbjct: 208 AWRIGYSSASLASLCAAVSAGLGVSLLPASSVQAGHRVLGEKDGFPVVDGLELALYARSN 267
Query: 482 KGGSSADFLDGMAGWCGSRARAA 414 G D ++ C RA AA Sbjct: 268 LGAVGRTLRDELSDLCTQRAEAA 290
>tr|Q5MJ50|Q5MJ50_GIALA GARP-like protein 3 OS=Giardia lamblia GN=glp3 PE=4 SV=1 Length = 507
Score = 35.8 bits (81), Expect = 2.6 Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 9/147 (6%) Frame = +1
Query: 61 PSCHSFPQVLNQAVINIDNHRRCTSASPLRHHHRLNCHFPYTFSIDYTTVLPLTCDLNAS 240 P+ S VL+ +VI S+ + + H+P T Y+T L LT + A Sbjct: 291 PTSDSVVSVLDNSVIQHSGSAISISSLNGTNFQTMGSHYPSTSVFPYSTPLTLTPQIPAY 350
Query: 241 SCPNSLLDLTLLFTACFL-------PPL--PSSPDMATLTITRNSGCCRVPSLRNKSRAP 393 CP + + +T L PPL PS+ M + G + S +R Sbjct: 351 YCPGIIAGQPIQYTVAALGHPIQLQPPLTQPSAHAMV------SHGLQPLHSQTYATRRK 404
Query: 394 PRPLSAWAARARLPHHPAMPSRKSAEL 474 PR S + A+ P +R+ AEL Sbjct: 405 PRRASTSSGDAQSSQTPFYWTREQAEL 431
>tr|A8B9X4|A8B9X4_GIALA GARP-like protein 3 OS=Giardia lamblia ATCC 50803 GN=GL50803_9154 PE=4 SV=1 Length = 507
Score = 35.8 bits (81), Expect = 2.6 Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 9/147 (6%) Frame = +1
Query: 61 PSCHSFPQVLNQAVINIDNHRRCTSASPLRHHHRLNCHFPYTFSIDYTTVLPLTCDLNAS 240 P+ S VL+ +VI S+ + + H+P T Y+T L LT + A Sbjct: 291 PTSDSVVSVLDNSVIQHSGSAISISSLNGTNFQTMGSHYPSTSVFPYSTPLTLTPQIPAY 350
Query: 241 SCPNSLLDLTLLFTACFL-------PPL--PSSPDMATLTITRNSGCCRVPSLRNKSRAP 393 CP + + +T L PPL PS+ M + G + S +R Sbjct: 351 YCPGIIAGQPIQYTVAALGHPIQLQPPLTQPSAHAMV------SHGLQPLHSQTYATRRK 404
Query: 394 PRPLSAWAARARLPHHPAMPSRKSAEL 474 PR S + A+ P +R+ AEL Sbjct: 405 PRRASTSSGDAQSSQTPFYWTREQAEL 431
>tr|B8B787|B8B787_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26425 PE=4 SV=1 Length = 147
Score = 35.4 bits (80), Expect = 3.4 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = +1
Query: 292 LPPLPSSPDMATLTITRNSGCCRVPSLRNKSRAPPRPLSAWAARARLPHHPAMPSRKSAE 471 LPPLP+ P MA T+T + CR+ S P P S W A A ++P+ K A+ Sbjct: 88 LPPLPTVPMMAPDTVTASRHGCRL----RTSEGAPAPTSPWQAAA-----SSLPAGKEAD 138
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