DK960354 |
Clone id |
TST39A01NGRL0007_D02 |
Library |
TST39 |
Length |
665 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_D02. 5' end sequence. |
Accession |
DK960354 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTTTTGCGAGATCAACAAGTCTGCTGCACAAGGAAACGAGACAGGAAAATGTTGCAATTG AGGCTGAGCCAGCAGACCTGCGGGAGGCCATCACCATCGCTGTACCCTTCTGGAATCTCC TCTGCGTATATTCCATGCAGTAGAAAGAGCAGTTGTTGCCCTCCTTCCTGGCATTTTTTT ACTGATTCTGCGCAGCTTCGAACCCTCCTACCCCTTTCACGTGGTCCTGTTCTTTCATGC ACCTCGACCCGCATTGCTTCTGCAGAAACCCGCACCGTTGGTGAAGAGGAGATCAGGCGG TCTCAGGTCTCAAAGCGTTTGGAGACTGTTGGACGCCACATGAAACGTGTGGGCACGCTT AGTTTCTGGGGTCAACTCGTTTGTACAGTTGTTTCTGCCGTGATACTAGCATTTTCAGTG GTGATTAGTGGAACACCTACTGCTCAAGCAACCTTCTATTTGACAGCCGGAGGCATAACA GCAGCCTTTATCTCTGTGTTCTGGGCATATGGCTACATTCGTTTGTCGAATAAATTGCGC TCTACTGTACACGCGCTAAGCAAGGCTCCTCCGCGTGCAGATGTGGTGAATCAACTGAAG AATGGTGTTATTATCAATTTTTTGGGGATGGGCCTGACATTATTAGGCATGGAGGCTACT GTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42980 |
Definition |
sp|Q42980|OLEO1_ORYSJ Oleosin 16 kDa OS=Oryza sativa subsp. japonica |
Align length |
97 |
Score (bit) |
33.1 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P1P8 |
Definition |
tr|A9P1P8|A9P1P8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
139 |
Score (bit) |
176.0 |
E-value |
9.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960354|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_D02, 5' (665 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P1P8|A9P1P8_PICSI Putative uncharacterized protein OS=Picea... 176 9e-43 tr|A7P9P8|A7P9P8_VITVI Chromosome chr3 scaffold_8, whole genome ... 174 6e-42 tr|Q09S70|Q09S70_PEA Tic21 OS=Pisum sativum PE=2 SV=1 172 2e-41 tr|A9S7G5|A9S7G5_PHYPA Predicted protein OS=Physcomitrella paten... 166 1e-39 tr|A9PC12|A9PC12_POPTR Putative uncharacterized protein OS=Popul... 164 4e-39 tr|A9TLD9|A9TLD9_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 1e-38 tr|Q9SHU7|Q9SHU7_ARATH Expressed protein (Putative uncharacteriz... 161 4e-38 tr|B6TA10|B6TA10_MAIZE Putative uncharacterized protein OS=Zea m... 160 5e-38 tr|B4FL94|B4FL94_MAIZE Putative uncharacterized protein OS=Zea m... 160 5e-38 tr|B6T3M8|B6T3M8_MAIZE Putative uncharacterized protein OS=Zea m... 160 9e-38 tr|A9S9K5|A9S9K5_PHYPA Predicted protein (Fragment) OS=Physcomit... 155 3e-36 tr|Q6ZHS6|Q6ZHS6_ORYSJ Os02g0187600 protein OS=Oryza sativa subs... 154 6e-36 tr|Q67WE9|Q67WE9_ORYSJ Os06g0638100 protein OS=Oryza sativa subs... 154 6e-36 tr|B8B0I1|B8B0I1_ORYSI Putative uncharacterized protein OS=Oryza... 154 6e-36 tr|A3BDW6|A3BDW6_ORYSJ Putative uncharacterized protein OS=Oryza... 154 6e-36 tr|A2X1S8|A2X1S8_ORYSI Putative uncharacterized protein OS=Oryza... 154 6e-36 tr|A3A3Y1|A3A3Y1_ORYSJ Putative uncharacterized protein OS=Oryza... 153 8e-36 tr|B4FTE0|B4FTE0_MAIZE Putative uncharacterized protein OS=Zea m... 145 2e-33 tr|Q011M4|Q011M4_OSTTA Homology to unknown gene OS=Ostreococcus ... 101 5e-20 tr|A4S2P6|A4S2P6_OSTLU Predicted protein (Fragment) OS=Ostreococ... 94 8e-18 tr|A8I0C9|A8I0C9_CHLRE PIC1 permease (Fragment) OS=Chlamydomonas... 77 7e-13 tr|B5VXV1|B5VXV1_SPIMA Putative uncharacterized protein OS=Arthr... 73 2e-11 tr|Q114A8|Q114A8_TRIEI Putative uncharacterized protein OS=Trich... 69 2e-10 tr|A0YIB0|A0YIB0_9CYAN Putative uncharacterized protein OS=Lyngb... 66 2e-09 tr|B4WS68|B4WS68_9SYNE Putative uncharacterized protein OS=Synec... 64 1e-08 tr|A8JBZ7|A8JBZ7_CHLRE Predicted protein OS=Chlamydomonas reinha... 62 3e-08 tr|B2J754|B2J754_NOSP7 Putative uncharacterized protein OS=Nosto... 61 7e-08 tr|A0ZDA6|A0ZDA6_NODSP Putative uncharacterized protein OS=Nodul... 61 7e-08 tr|B7G9W6|B7G9W6_PHATR Predicted protein OS=Phaeodactylum tricor... 57 8e-07 tr|A0YW03|A0YW03_9CYAN Putative uncharacterized protein OS=Lyngb... 57 1e-06
>tr|A9P1P8|A9P1P8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 304
Score = 176 bits (447), Expect = 9e-43 Identities = 89/139 (64%), Positives = 110/139 (79%), Gaps = 7/139 (5%) Frame = +1
Query: 268 TRTVGE-------EEIRRSQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVI 426 T TVG E+ + SQVSKRLE+ GR+ KR+G L FW QLVCT VS+VILAFSVVI Sbjct: 94 TATVGSSSPDAEREKEKISQVSKRLESTGRYFKRLGGLGFWSQLVCTAVSSVILAFSVVI 153
Query: 427 SGTPTAQATFYLTAGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNG 606 +G+PT+ ATFY+TA GI AAF+SVFW++GYIRL+ +LR T + +KAPPRADVV LKNG Sbjct: 154 TGSPTSPATFYMTAVGIVAAFLSVFWSFGYIRLAERLRKTANDPAKAPPRADVVKNLKNG 213
Query: 607 VIINFLGMGLTLLGMEATV 663 ++IN LGMG T+LGM+ATV Sbjct: 214 IVINILGMGATVLGMQATV 232
>tr|A7P9P8|A7P9P8_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036653001 PE=4 SV=1 Length = 293
Score = 174 bits (440), Expect = 6e-42 Identities = 93/164 (56%), Positives = 118/164 (71%), Gaps = 5/164 (3%) Frame = +1
Query: 187 SAQLRTLLP-LSRGPVLSCTSTRIASAETRTVGE----EEIRRSQVSKRLETVGRHMKRV 351 S L +L P LS L TR+AS+ + T E+ + +QV+KRLE R+ +R+ Sbjct: 58 SLSLSSLKPSLSSYDALGQRGTRLASSISPTFPSSDESEKAKLAQVAKRLENTSRYFRRL 117
Query: 352 GTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLTAGGITAAFISVFWAYGYIRLSN 531 G L FWGQLVCTVV+AVIL+FSVVI+G ++ ATFY T GGI AAFISVFW++GYIRLS+ Sbjct: 118 GNLGFWGQLVCTVVAAVILSFSVVITGKISSPATFYSTTGGIVAAFISVFWSFGYIRLSD 177
Query: 532 KLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLLGMEATV 663 +LR T SKAPPRADVV LKNG+++N LGMG +LGM+ATV Sbjct: 178 RLRKTASEPSKAPPRADVVKSLKNGIVLNLLGMGAAILGMQATV 221
>tr|Q09S70|Q09S70_PEA Tic21 OS=Pisum sativum PE=2 SV=1 Length = 283
Score = 172 bits (435), Expect = 2e-41 Identities = 80/126 (63%), Positives = 102/126 (80%) Frame = +1
Query: 286 EEIRRSQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLT 465 E+ + QVSKRLE RH KR+G+L FWGQLVCT+VSAVIL+FSV+++G T+ ATFY T Sbjct: 86 EKAKLDQVSKRLEKTARHFKRLGSLGFWGQLVCTIVSAVILSFSVIVTGKVTSPATFYAT 145
Query: 466 AGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLL 645 AGGI AAFI VFW++GYIRLS +LR T + +KAPPR+DVV L+NG+++N LGMG +L Sbjct: 146 AGGIAAAFIPVFWSFGYIRLSERLRKTANDPTKAPPRSDVVKSLQNGIVLNLLGMGAAIL 205
Query: 646 GMEATV 663 GM+ATV Sbjct: 206 GMQATV 211
>tr|A9S7G5|A9S7G5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_125340 PE=4 SV=1 Length = 191
Score = 166 bits (420), Expect = 1e-39 Identities = 80/120 (66%), Positives = 97/120 (80%) Frame = +1
Query: 304 QVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLTAGGITA 483 QV++RLE H KR G+L FWGQLVCTVV+AVILAFSVVI+G T+ + YLTAGGI A Sbjct: 2 QVARRLERTAGHFKRFGSLGFWGQLVCTVVAAVILAFSVVITGQATSPVSIYLTAGGIAA 61
Query: 484 AFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLLGMEATV 663 AF+SVFW++GYIRL+ KLR T+ +KAPPRA VV L+NG+IIN LGMG TLLG++ATV Sbjct: 62 AFLSVFWSFGYIRLAQKLRETIGTPTKAPPRAQVVKNLRNGIIINLLGMGATLLGLQATV 121
>tr|A9PC12|A9PC12_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 293
Score = 164 bits (416), Expect = 4e-39 Identities = 78/126 (61%), Positives = 97/126 (76%) Frame = +1
Query: 286 EEIRRSQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLT 465 E + +QV+KRLE R+ KR+G L FWGQL+C V+AVIL+FSVV++G + TFY T Sbjct: 96 ERAKLAQVAKRLENTSRYFKRLGNLGFWGQLICATVAAVILSFSVVVTGKIPSPPTFYAT 155
Query: 466 AGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLL 645 GGI AAFISVFW++GYIRLS KLR T + SKAPPRADVV LKNG+++N LGMG +L Sbjct: 156 LGGIAAAFISVFWSFGYIRLSEKLRKTANDPSKAPPRADVVKSLKNGIVLNLLGMGAAIL 215
Query: 646 GMEATV 663 GM+ATV Sbjct: 216 GMQATV 221
>tr|A9TLD9|A9TLD9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46757 PE=4 SV=1 Length = 181
Score = 162 bits (411), Expect = 1e-38 Identities = 80/119 (67%), Positives = 97/119 (81%) Frame = +1
Query: 307 VSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLTAGGITAA 486 VSKRLE + KR+G L FWGQLVCTVVSAVILAFSVVI+G TA + YLTAGGI AA Sbjct: 1 VSKRLERTAGYFKRLGQLGFWGQLVCTVVSAVILAFSVVITGQATAPVSTYLTAGGIAAA 60
Query: 487 FISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLLGMEATV 663 F+SVFW++GYIRLS +LR+ V +KAPPRA+VV LKNG++IN LG+G +LLG++ATV Sbjct: 61 FLSVFWSFGYIRLSQRLRNAVDNPTKAPPRAEVVKNLKNGIVINLLGLGSSLLGLQATV 119
>tr|Q9SHU7|Q9SHU7_ARATH Expressed protein (Putative uncharacterized protein At2g15290) (At2g15290/F27O10.6) OS=Arabidopsis thaliana GN=At2g15290 PE=2 SV=1 Length = 296
Score = 161 bits (407), Expect = 4e-38 Identities = 76/126 (60%), Positives = 102/126 (80%) Frame = +1
Query: 286 EEIRRSQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLT 465 ++ + +QV+KRLE R+ KR+G++ FWGQLV TVV+AVIL+FS+V++G PT+ ATFY T Sbjct: 99 DKAKLAQVAKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYAT 158
Query: 466 AGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLL 645 A GI AAF+SVFW++GYIRLS +LR T +KAPPRADVV L++G+++N LGMG LL Sbjct: 159 ASGIAAAFVSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALL 218
Query: 646 GMEATV 663 GM+ATV Sbjct: 219 GMQATV 224
>tr|B6TA10|B6TA10_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 285
Score = 160 bits (406), Expect = 5e-38 Identities = 76/126 (60%), Positives = 95/126 (75%) Frame = +1
Query: 286 EEIRRSQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLT 465 E ++ QV +RLE R+ K +GTL FW QLVCT++SA ILAFS V++G T+ TFY T Sbjct: 87 ERVKLEQVMRRLEKTARYFKNLGTLGFWSQLVCTIISAGILAFSTVVTGKVTSPFTFYAT 146
Query: 466 AGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLL 645 A GI AAFISVFW++GYIRLS +LR T +KAPPRADVV LKNG+++N LGMG +L Sbjct: 147 AAGIAAAFISVFWSFGYIRLSERLRKTSKEPAKAPPRADVVKSLKNGIVVNILGMGAAVL 206
Query: 646 GMEATV 663 GM+ATV Sbjct: 207 GMQATV 212
>tr|B4FL94|B4FL94_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 285
Score = 160 bits (406), Expect = 5e-38 Identities = 76/126 (60%), Positives = 95/126 (75%) Frame = +1
Query: 286 EEIRRSQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQATFYLT 465 E ++ QV +RLE R+ K +GTL FW QLVCT++SA ILAFS V++G T+ TFY T Sbjct: 87 ERVKLEQVMRRLEKTARYFKNLGTLGFWSQLVCTIISAGILAFSTVVTGKVTSPFTFYAT 146
Query: 466 AGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMGLTLL 645 A GI AAFISVFW++GYIRLS +LR T +KAPPRADVV LKNG+++N LGMG +L Sbjct: 147 AAGIAAAFISVFWSFGYIRLSERLRKTSKEPAKAPPRADVVKSLKNGIVVNILGMGAAVL 206
Query: 646 GMEATV 663 GM+ATV Sbjct: 207 GMQATV 212
>tr|B6T3M8|B6T3M8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 274
Score = 160 bits (404), Expect = 9e-38 Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 3/130 (2%) Frame = +1
Query: 283 EEEIRR---SQVSKRLETVGRHMKRVGTLSFWGQLVCTVVSAVILAFSVVISGTPTAQAT 453 EEE+ R QV +RLE R+ K +GTL FW QLVCT+VSA ILAFS V++G TA T Sbjct: 74 EEEVERVKLEQVMRRLEKTARYFKNLGTLGFWSQLVCTIVSAGILAFSTVVTGKVTAPFT 133
Query: 454 FYLTAGGITAAFISVFWAYGYIRLSNKLRSTVHALSKAPPRADVVNQLKNGVIINFLGMG 633 FY TA GI AAFIS FW++GYIRLS +LR T +KAPPRA+VVN LKNG+++N LGMG Sbjct: 134 FYATAAGIAAAFISSFWSFGYIRLSERLRRTSKEPAKAPPRANVVNSLKNGIVLNILGMG 193
Query: 634 LTLLGMEATV 663 +LGM+ATV Sbjct: 194 AAVLGMQATV 203
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