DK960355 |
Clone id |
TST39A01NGRL0007_D03 |
Library |
TST39 |
Length |
579 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_D03. 5' end sequence. |
Accession |
DK960355 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1625Contig1 |
Sequence |
CAACTCCATCTTCTTCAAAACTCCATCGACTACCTCGGAGTTCCAATCTGTTGTACCCGC CATGTTTTTGGTAGATTGGTTCTACAACTTTCTGGCCTCTCTCGGAATTTGGCAGAAGGA GGCCAAAATTCTTTTCTTGGGTCTCGACAACGCAGGCAAGACCACTCTGCTTCACATGCT TAAAGATGCGAGACTAGCTCAACATCAACCTACTCAGCACCCCACTTCAGAAGAACTTAG CATTGGGAAGATAAAGTTCAAAACTTTTGATTTGGGTGGCCATCAGATTGCTCGCATAGT GTGGAAAGACTATGATGCCAAGGTTGATGGCATTGTGTACCTTGTTGATGCTGCTGACAA AGAGAGGTTTCCTGAGTCCGACAAAGAGCTCGACGGACTTCTCTCAGATGATTCTTTGGC TGGTGTGCCTTTCTTGATTCTCGGAAATAAAATAGACATTCCTACAGCTGCTTCAGAGGA GGAGCTGAGATACTACCTTGGGCTTTCCAATTTTACCACTGGCGAAGGATAGGTAACTCT TGCAGAAGATATGCGAGCCATCGAGGTCTTTATGTGCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04834 |
Definition |
sp|O04834|SAR1A_ARATH GTP-binding protein SAR1A OS=Arabidopsis thaliana |
Align length |
173 |
Score (bit) |
261.0 |
E-value |
2.0e-69 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SDK4 |
Definition |
tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
173 |
Score (bit) |
266.0 |
E-value |
8.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960355|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_D03, 5' (579 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert seque... 266 8e-70 tr|B8ABU1|B8ABU1_ORYSI Putative uncharacterized protein OS=Oryza... 266 8e-70 tr|B4FPT6|B4FPT6_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=... 264 3e-69 tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea... 263 5e-69 tr|Q93W16|Q93W16_ORYSJ cDNA clone:006-210-H07, full insert seque... 262 9e-69 tr|Q6PLR8|Q6PLR8_MAIZE Putative ras-like small GTP binding ptote... 262 9e-69 tr|B2ZGG7|B2ZGG7_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 262 9e-69 tr|B2ZGG5|B2ZGG5_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 261 2e-68 tr|A2WPH1|A2WPH1_ORYSI Putative uncharacterized protein OS=Oryza... 261 2e-68 tr|Q2QNM5|Q2QNM5_ORYSJ Os12g0560300 protein OS=Oryza sativa subs... 261 2e-68 tr|A2ZLM3|A2ZLM3_ORYSI Putative uncharacterized protein OS=Oryza... 261 2e-68 tr|B7ZZP2|B7ZZP2_MAIZE Putative uncharacterized protein OS=Zea m... 261 3e-68 tr|A9RG76|A9RG76_PHYPA Sar1-family small GTPase OS=Physcomitrell... 260 3e-68 tr|A7Q8N0|A7Q8N0_VITVI Chromosome chr5 scaffold_64, whole genome... 259 6e-68 tr|O81695|O81695_AVEFA Ras-like small monomeric GTP-binding prot... 259 7e-68 tr|A9T8D1|A9T8D1_PHYPA Sar1-family small GTPase OS=Physcomitrell... 259 7e-68 tr|B7FMA7|B7FMA7_MEDTR Putative uncharacterized protein OS=Medic... 259 1e-67 tr|Q8VYP7|Q8VYP7_ARATH Putative Sar1 GTP binding protein (Sar1-l... 258 1e-67 tr|B2ZGG4|B2ZGG4_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 258 1e-67 tr|B6TG58|B6TG58_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=... 257 3e-67 tr|A9NLN4|A9NLN4_PICSI Putative uncharacterized protein OS=Picea... 256 5e-67 tr|A9PIL8|A9PIL8_POPJC Putative uncharacterized protein OS=Popul... 256 6e-67 tr|A9PD96|A9PD96_POPTR Putative uncharacterized protein OS=Popul... 255 1e-66 tr|O24113|O24113_NICPL Small GTP-binding protein OS=Nicotiana pl... 254 2e-66 tr|Q3HRY1|Q3HRY1_SOLTU Small GTP-binding protein Sar1BNt-like pr... 254 3e-66 tr|Q38M59|Q38M59_SOLTU NtSar1 protein-like OS=Solanum tuberosum ... 253 5e-66 tr|Q9SDQ5|Q9SDQ5_TOBAC Small GTP-binding protein Sar1BNt OS=Nico... 252 9e-66 tr|Q307Y7|Q307Y7_SOLTU GTPase-like OS=Solanum tuberosum PE=2 SV=1 251 2e-65 tr|O24138|O24138_TOBAC NtSar1 protein OS=Nicotiana tabacum GN=Nt... 249 6e-65 tr|Q38HV5|Q38HV5_SOLTU GTPase-like protein OS=Solanum tuberosum ... 248 2e-64
>tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert sequence OS=Oryza sativa subsp. japonica GN=P0705D01.9 PE=2 SV=1 Length = 193
Score = 266 bits (679), Expect = 8e-70 Identities = 135/173 (78%), Positives = 144/173 (83%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDAADKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAADKERFAESKKELDALLADDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRYYLGLSNFTTG+G V LA+ ++R +E+FMC Sbjct: 121 TVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNLADSNVRPLEIFMC 173
>tr|B8ABU1|B8ABU1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01215 PE=4 SV=1 Length = 193
Score = 266 bits (679), Expect = 8e-70 Identities = 135/173 (78%), Positives = 144/173 (83%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDAADKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAADKERFAESKKELDALLADDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRYYLGLSNFTTG+G V LA+ ++R +E+FMC Sbjct: 121 TVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNLADSNVRPLEIFMC 173
>tr|B4FPT6|B4FPT6_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=2 SV=1 Length = 193
Score = 264 bits (674), Expect = 3e-69 Identities = 133/173 (76%), Positives = 143/173 (82%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IG+IKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGRIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAVDKERFAESKKELDALLADDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRYYLGLSNFTTG+G V LA+ ++R +E+FMC Sbjct: 121 NVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNLADSNVRPLEIFMC 173
>tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 193
Score = 263 bits (672), Expect = 5e-69 Identities = 133/173 (76%), Positives = 143/173 (82%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFL DWFY LA+LG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLFDWFYGILATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDAADKERF E Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAADKERFAESKKELDALLSDDSLT 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASE+ELRYYLGLSN+TTG+G V LA+ ++RAIEVFMC Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYYLGLSNYTTGKGKVNLADSNVRAIEVFMC 173
>tr|Q93W16|Q93W16_ORYSJ cDNA clone:006-210-H07, full insert sequence OS=Oryza sativa subsp. japonica GN=B1088D01.1 PE=2 SV=1 Length = 193
Score = 262 bits (670), Expect = 9e-69 Identities = 134/173 (77%), Positives = 142/173 (82%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFL DWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQHPTSEELS Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRY+LGLSNFTTG+G V+L E ++R +EVFMC Sbjct: 121 AVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVSLGESNVRPLEVFMC 173
>tr|Q6PLR8|Q6PLR8_MAIZE Putative ras-like small GTP binding ptotein OS=Zea mays PE=2 SV=1 Length = 193
Score = 262 bits (670), Expect = 9e-69 Identities = 132/173 (76%), Positives = 143/173 (82%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IG+IKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGRIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAVDKERFAESKKELDALLADDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRYYLGLSNFTTG+G V LA+ ++R +++FMC Sbjct: 121 NVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNLADSNVRPLKIFMC 173
>tr|B2ZGG7|B2ZGG7_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.4 PE=2 SV=1 Length = 193
Score = 262 bits (670), Expect = 9e-69 Identities = 134/173 (77%), Positives = 144/173 (83%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRY+LGLSNFTTG+G V+L+E ++R +EVFMC Sbjct: 121 TVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVSLSESNVRPLEVFMC 173
>tr|B2ZGG5|B2ZGG5_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.2 PE=2 SV=1 Length = 193
Score = 261 bits (668), Expect = 2e-68 Identities = 133/173 (76%), Positives = 144/173 (83%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRY++GLSNFTTG+G V+L+E ++R +EVFMC Sbjct: 121 TVPFLILGNKIDIPYAASEEELRYHMGLSNFTTGKGKVSLSESNVRPLEVFMC 173
>tr|A2WPH1|A2WPH1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01745 PE=3 SV=1 Length = 193
Score = 261 bits (668), Expect = 2e-68 Identities = 134/173 (77%), Positives = 142/173 (82%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFL DWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQHPTSEELS Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRY+LGLSNFTTG+G V+L E ++R +EVFMC Sbjct: 121 TVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVSLGESNVRPLEVFMC 173
>tr|Q2QNM5|Q2QNM5_ORYSJ Os12g0560300 protein OS=Oryza sativa subsp. japonica GN=Os12g0560300 PE=2 SV=1 Length = 193
Score = 261 bits (667), Expect = 2e-68 Identities = 133/173 (76%), Positives = 143/173 (82%), Gaps = 1/173 (0%) Frame = +2
Query: 62 MFLVDWFYNFLASLGIWQKEAKILFLGLDNAGKTTLLHMLKDARLAQHQPTQHPTSEELS 241 MFLVDWFY LASLG+WQKEAKILFLGLDNAGKTTLLHMLKD RL QHQPTQ+PTSEELS Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
Query: 242 IGKIKFKTFDLGGHQIARIVWKDYDAKVDGIVYLVDAADKERFPEXXXXXXXXXXXXXXA 421 IGKIKFK FDLGGHQIAR VWKDY AKVD +VYLVDA DKERF E A Sbjct: 61 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDSLA 120
Query: 422 GVPFLILGNKIDIPTAASEEELRYYLGLSNFTTGEG*VTLAE-DMRAIEVFMC 577 VPFLILGNKIDIP AASEEELRY++GLSNFTTG+G V+L E ++R +EVFMC Sbjct: 121 TVPFLILGNKIDIPYAASEEELRYHMGLSNFTTGKGRVSLGESNVRPLEVFMC 173
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