DK960358
Clone id TST39A01NGRL0007_D06
Library
Length 619
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_D06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTGCAGCCTTCTTTTTCGCCATAGCTTTTAGAATAGCATTCAGATCTCTAGACTTCTGTT
GTTGTGGGCTTCGCGTTGATTGCATTGAGCTCCTTGATTTTTCGCTGGAGCTCTCCCTCG
TAGTCGGGGTTGCAATCGGGGTTTCGTTCTGTTGCCTTGCCATTCCAGATCGACCTGCCA
GGGTGCAGTTCTCTGACTCTCGAGCTGCTGCTTGCGCCTGGAGATTCTCATCACTCTGTT
CTTTTCTACAGCAAAAAATCCATTAACCTTGTCTGGAGATTTGCCTTATGTGGAGAATCA
CCCATACGTGACTGCTCCATAGCTCTGAAGTGAGAAGGTGCATGCGCATTGTGGTGTCAT
AGGTACTTCTCGCATCGAGGGCTGCTATGGGTACTGCTGTACTTCTGCCGCATGACTGCT
TGCGGAACACCAAAAGCAAGCATAAGGGCCATCTCTCTGAGGCAATTCTTCACTCTGATA
GAGCTTACCGAGCAAGAAGAGACACCCTTCAAGCATCTGTCTTAAGTGATCCACCGTCCA
CAGTATGCGGGGGATCACGGAAGGAAAAGCATCCTTACTGGTAGAGTAGAATGGACTCCC
CAATCCACTCCACCACCTC
■■Homology search results ■■ -
sp_hit_id Q9I7U4
Definition sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster
Align length 44
Score (bit) 31.2
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960358|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_D06, 5'
(619 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE... 31 4.5
sp|A8NVW1|IML2_COPC7 Mitochondrial outer membrane protein IML2 O... 31 5.9
sp|Q95K63|STOX2_MACFA Storkhead-box protein 2 OS=Macaca fascicul... 30 9.9
sp|Q9P2F5|STOX2_HUMAN Storkhead-box protein 2 OS=Homo sapiens GN... 30 9.9

>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1
SV=3
Length = 18141

Score = 31.2 bits (69), Expect = 4.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2

Query: 258 FFAVEKNRVMRISRRKQQLESQRTAPWQVDLEWQGNRTKPRLQP 127
F E +M +S R ++LE+QR Q + W+ + +P+LQP
Sbjct: 5137 FITTEDVNIMHVSER-EKLEAQRLIREQQAVNWRQQQQRPQLQP 5179


>sp|A8NVW1|IML2_COPC7 Mitochondrial outer membrane protein IML2
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=IML2 PE=3 SV=1
Length = 711

Score = 30.8 bits (68), Expect = 5.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2

Query: 612 WSGLGSPFYSTSKDAFPSVIPRILWTVDHLRQMLEGCLFLLGKLYQSEEL 463
W+ LG Y S D+F + W+ + GC F LG L +++EL
Sbjct: 409 WTLLGQRRYQESADSFMKITELNTWSHATYYFLSAGCHFALGNLEKTQEL 458


>sp|Q95K63|STOX2_MACFA Storkhead-box protein 2 OS=Macaca
fascicularis GN=STOX2 PE=2 SV=1
Length = 926

Score = 30.0 bits (66), Expect = 9.9
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -3

Query: 479 IRVKNCLREMALMLAFGVPQAVMRQKYSSTHSSPRCEKYL*HHNAHAPSHFRAMEQSRMG 300
+ V+N +R ALM +A + SS H S R +K H +H S + + G
Sbjct: 322 LTVENVMRHTALMKKLEEEKAQRSKAGSSAHHSGRSKKSRTHRKSHGKSRSHSKTRVSKG 381

Query: 299 DSPHKANL 276
D ++L
Sbjct: 382 DPSDGSHL 389


>sp|Q9P2F5|STOX2_HUMAN Storkhead-box protein 2 OS=Homo sapiens
GN=STOX2 PE=2 SV=2
Length = 926

Score = 30.0 bits (66), Expect = 9.9
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -3

Query: 479 IRVKNCLREMALMLAFGVPQAVMRQKYSSTHSSPRCEKYL*HHNAHAPSHFRAMEQSRMG 300
+ V+N +R ALM +A + SS H S R +K H +H S + + G
Sbjct: 322 LTVENVMRHTALMKKLEEEKAQRSKAGSSAHHSGRSKKSRTHRKSHGKSRSHSKTRVSKG 381

Query: 299 DSPHKANL 276
D ++L
Sbjct: 382 DPSDGSHL 389


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960358|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_D06, 5'
(619 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******