| DK960375 |
| Clone id |
TST39A01NGRL0007_D24 |
| Library |
TST39 |
| Length |
671 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_D24. 5' end sequence. |
| Accession |
DK960375 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
CAGAATCCCAATTACTATAATCTTCAAGGGACAAGCCATAGGCATCTCTCTGATCACCTG
TCAGAGCTTGTGGAGAATACCTTATCTGACCTGGAAACAAGTAAATGCATAGCAATAGAG
GATGATATGGATCTCTCACCTCTGAACTTAGGAATGATTGCCTCATACTACTACATCAGC
TACACTACAATTGAATTGTTCAGCTCCTCCTTGACTGCAAAATCCAAGATGAAAGGGCTT
CTGGAAATTCTTGCCTCTGCTTCAGAGTACTCACAATTGCCTGTGAGACCGGGGGAGGAA
GAGACGATACGGAAAATGATAAATCATCAGCGGTTTGGCATTGACAAACCAAAGTGCACC
GATCCTCATGCCAAAGCAAATGTCCTGTTGCAAGCACACTTCAGCAGACATGTAGTCACT
AATGTACTTGCATTGGATCAAAGAGAGGTCCTCCTTGATGCCAGCAGGCTATTACAAGCA
ATGGTAGATGTCATTTCGAGTAATGGGTGGTTGAATCCTGCACTTGCAGCTATGGAGATG
AGCCAGATGGTAACTCAAGGGCTTTGGGAGAATGACTCAGTGCTTTTGCAACTTCCCCAT
TTCACCAAAGAGCTTGCAAAGAAATGTCACGAGAATCCAGGCAAAAGCATCGAGACTGTT
TTTGAGCTTGT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O75643 |
| Definition |
sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens |
| Align length |
223 |
| Score (bit) |
258.0 |
| E-value |
2.0e-68 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960375|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_D24, 5'
(671 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa ... 258 2e-68
sp|Q9VUV9|U520_DROME Putative U5 small nuclear ribonucleoprotein... 249 1e-65
sp|Q9U2G0|U520_CAEEL Putative U5 small nuclear ribonucleoprotein... 214 4e-55
sp|Q9UT24|BRR2_SCHPO Pre-mRNA-splicing factor brr2 OS=Schizosacc... 168 2e-41
sp|Q8N3C0|HELC1_HUMAN Activating signal cointegrator 1 complex s... 126 9e-29
sp|P32639|BRR2_YEAST Pre-mRNA-splicing helicase BRR2 OS=Saccharo... 120 8e-27
sp|P53327|SLH1_YEAST Antiviral helicase SLH1 OS=Saccharomyces ce... 92 2e-18
sp|O60072|MUG81_SCHPO Putative helicase mug81 OS=Schizosaccharom... 82 3e-15
sp|Q5R660|SEC63_PONAB Translocation protein SEC63 homolog OS=Pon... 62 3e-09
sp|Q9UGP8|SEC63_HUMAN Translocation protein SEC63 homolog OS=Hom... 62 3e-09
sp|Q8VHE0|SEC63_MOUSE Translocation protein SEC63 homolog OS=Mus... 60 8e-09
sp|A4WG49|STHA_ENT38 Soluble pyridine nucleotide transhydrogenas... 36 0.21
sp|A6TGE6|STHA_KLEP7 Soluble pyridine nucleotide transhydrogenas... 34 0.80
sp|Q8GXB7|TRMB_ARATH Probable tRNA (guanine-N(7)-)-methyltransfe... 33 1.0
sp|A7GG48|ACKA_CLOBL Acetate kinase OS=Clostridium botulinum (st... 33 1.8
sp|A8AKW0|STHA_CITK8 Soluble pyridine nucleotide transhydrogenas... 32 3.0
sp|P66008|STHA_SALTY Soluble pyridine nucleotide transhydrogenas... 32 4.0
sp|P66009|STHA_SALTI Soluble pyridine nucleotide transhydrogenas... 32 4.0
sp|A9N0H2|STHA_SALPB Soluble pyridine nucleotide transhydrogenas... 32 4.0
sp|Q5PK71|STHA_SALPA Soluble pyridine nucleotide transhydrogenas... 32 4.0
sp|Q57H91|STHA_SALCH Soluble pyridine nucleotide transhydrogenas... 32 4.0
sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=2 31 5.2
sp|Q895N2|ACKA_CLOTE Acetate kinase OS=Clostridium tetani GN=ack... 31 6.8
sp|A5I4N7|ACKA_CLOBH Acetate kinase OS=Clostridium botulinum (st... 31 6.8
sp|A7FW24|ACKA_CLOB1 Acetate kinase OS=Clostridium botulinum (st... 31 6.8
sp|Q73P66|ACKA_TREDE Acetate kinase OS=Treponema denticola GN=ac... 30 8.8
>sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa
helicase OS=Homo sapiens GN=SNRNP200 PE=1 SV=2
Length = 2136
Score = 258 bits (659), Expect = 2e-68
Identities = 128/223 (57%), Positives = 164/223 (73%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG SHRHLSDHLSELVE TLSDLE SKCI+IED+MD++PLNLGMIA
Sbjct: 1766 QNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYIN 1825
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
ELFS SL AK+K++GL+EI+++A+EY +P+R E+ +R++ ++ PK
Sbjct: 1826 YTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFN 1885
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH K N+LLQAH SR ++ L D E+L A RL+QA VDV+SSNGWL+PALAAME+
Sbjct: 1886 DPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMEL 1945
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
+QMVTQ +W DS L QLPHFT E K+C + K +E+VF++
Sbjct: 1946 AQMVTQAMWSKDSYLKQLPHFTSEHIKRCTD---KGVESVFDI 1985
Score = 58.2 bits (139), Expect = 4e-08
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Frame = +1
Query: 148 LGMIAXXXXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINH 327
LG IA + ++ L L + + +SE+ + VR E+ ++K++
Sbjct: 984 LGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLER 1043
Query: 328 QRFGIDKPKCTDPHAKANVLLQAHFSRHVVTN-VLALDQREVLLDASRLLQAMVDVISSN 504
+ K +P AK NVLLQA S+ + L D V A RL++A+ +++ +
Sbjct: 1044 VPIPV-KESIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNR 1102
Query: 505 GWLNPALAAMEMSQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
GW + + +M+ + +W++ L Q +E+ KK E E +++L
Sbjct: 1103 GWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVVKKI-EKKNFPFERLYDL 1156
>sp|Q9VUV9|U520_DROME Putative U5 small nuclear ribonucleoprotein 200
kDa helicase OS=Drosophila melanogaster GN=CG5931 PE=2
SV=4
Length = 2142
Score = 249 bits (635), Expect = 1e-65
Identities = 131/228 (57%), Positives = 166/228 (72%), Gaps = 5/228 (2%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG +HRHLSDHLSELVENTLSDLE SKCI++EDDMD PLNLGMIA
Sbjct: 1765 QNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISVEDDMDTLPLNLGMIAAYYYIN 1824
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKM---INHQRFGIDK- 348
ELFS SL +K+K++GLLEI++SA+EY + VR EE+ +R + + ++ G ++
Sbjct: 1825 YTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVRHHEEQVLRTLSQRLPNKLTGPNET 1884
Query: 349 -PKCTDPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPAL 525
PK DPH K N+LLQAH SR + L D ++L A RL+QA VDV+SSNGWL+PA+
Sbjct: 1885 APKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQILSKAIRLIQACVDVLSSNGWLSPAV 1944
Query: 526 AAMEMSQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
AAME++QMVTQ +W DS L QLPHF+ E+ K+C E K IETVF++
Sbjct: 1945 AAMELAQMVTQAMWSKDSYLKQLPHFSPEIVKRCTE---KKIETVFDI 1989
Score = 60.1 bits (144), Expect = 1e-08
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRH------LSDHLSELVENTLSDLETSKCIAIEDDMD-LSPLNLGMI 159
+NP Y G SH L H ++L+ LE S I + +LG I
Sbjct: 931 RNPTLY---GVSHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRI 987
Query: 160 AXXXXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFG 339
A ++ L L + + +SE+ + VR E+ ++K++
Sbjct: 988 ASHYYLTHETMLTYNQLLKQTLSEIELFRVFSLSSEFRHISVREEEKLELQKLMERVPIP 1047
Query: 340 IDKPKCTDPHAKANVLLQAHFSRHVVTN-VLALDQREVLLDASRLLQAMVDVISSNGWLN 516
I K + AK NVLLQA+ S+ + L D + A+RL++A+ +++ + GW
Sbjct: 1048 I-KESIEEHSAKVNVLLQAYISQLKLEGFALMSDMVFITQSAARLMRAIFEIVLTRGWAQ 1106
Query: 517 PALAAMEMSQMVTQGLWENDSVLLQLPHFTKELAKK 624
A + + +M+ + +W++ + L Q E+AKK
Sbjct: 1107 LADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIAKK 1142
>sp|Q9U2G0|U520_CAEEL Putative U5 small nuclear ribonucleoprotein 200
kDa helicase OS=Caenorhabditis elegans GN=Y46G5A.4 PE=2
SV=1
Length = 2145
Score = 214 bits (544), Expect = 4e-55
Identities = 112/223 (50%), Positives = 150/223 (67%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQGT+HRHLSD LSELVE TL DLE SKCIA++D+MD LNLGMIA
Sbjct: 1765 QNPNYYNLQGTTHRHLSDALSELVELTLKDLENSKCIAVKDEMDTVSLNLGMIASYYYIS 1824
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
ELFS SL K+K + L+EI++++SE+ +P+R E+ +R++ + K T
Sbjct: 1825 YQTIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVILRQLAERLPGQLKNQKFT 1884
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH K N+L+ AH SR +T L D ++L A RL+QA VDV+SSNGWL+PA+ AME+
Sbjct: 1885 DPHVKVNLLIHAHLSRVKLTAELNKDTELIVLRACRLVQACVDVLSSNGWLSPAIHAMEL 1944
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQM+TQ ++ N+ L QLPH + L ++ K + +VFEL
Sbjct: 1945 SQMLTQAMYSNEPYLKQLPHCSAALLERA---KAKEVTSVFEL 1984
Score = 62.4 bits (150), Expect = 2e-09
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 10/233 (4%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIED---------DMDLSPLNLG 153
+NP Y + H L+E +DL + C+ ++ + LG
Sbjct: 924 KNPTLYGIT-----HEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELG 978
Query: 154 MIAXXXXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQR 333
IA + ++ L L I + +SE+ L VR E+ ++KM H
Sbjct: 979 RIASHFYCTYESMQTYNKLLVETCSDIDLFRIFSMSSEFKLLSVRDEEKLELQKMAEHAP 1038
Query: 334 FGIDKPKCTDPHAKANVLLQAHFSRHVVTN-VLALDQREVLLDASRLLQAMVDVISSNGW 510
I K + AK NVLLQA+ S+ + L D V A RL +A+ +++ GW
Sbjct: 1039 IPI-KENLDEASAKTNVLLQAYISQLKLEGFALQADMVFVAQSAGRLFRALFEIVLWRGW 1097
Query: 511 LNPALAAMEMSQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
A + + +MVTQ W + + L Q E+ + + S + +++L
Sbjct: 1098 AGLAQKVLTLCKMVTQRQWGSLNPLHQFKKIPSEVVRSI-DKKNYSFDRLYDL 1149
>sp|Q9UT24|BRR2_SCHPO Pre-mRNA-splicing factor brr2
OS=Schizosaccharomyces pombe GN=brr2 PE=1 SV=1
Length = 2176
Score = 168 bits (426), Expect = 2e-41
Identities = 91/223 (40%), Positives = 135/223 (60%), Gaps = 1/223 (0%)
Frame = +1
Query: 4 NPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLS-PLNLGMIAXXXXXX 180
NP YY LQ +H +S+ LS+LVE T++DL ++ I ++D+ D LNL MIA
Sbjct: 1802 NPAYYGLQDITHESVSEFLSDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGIT 1861
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
+ F+ SL+ ++KMKGLLEI+ SA+EY QLP+R E+ + ++ + + P
Sbjct: 1862 YITMQTFALSLSERTKMKGLLEIVTSAAEYEQLPIRKYEDIVLERIHSRLPVRLSNPNYE 1921
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH K+ +LL AHFSR + L +DQ+ +L LL A VD +SS G L + MEM
Sbjct: 1922 DPHTKSFILLAAHFSRFELPPGLVIDQKFILTRVHNLLGACVDTLSSEGHLIACIRPMEM 1981
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQ LW+ DS L Q+P+F L ++C++ + + VF++
Sbjct: 1982 SQMVTQALWDRDSPLKQIPYFDDALIERCNK---EGVHDVFDI 2021
Score = 63.5 bits (153), Expect = 9e-10
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Frame = +1
Query: 40 RHLSDHLSELVENTLSDLETSKCIAIEDDMD-LSPLNLGMIAXXXXXXXXXXELFSSSLT 216
++L ++L+ + LE K + L+ LG +A +++ L
Sbjct: 985 KYLVQKRADLLHSAAILLEKCKLLVYNRQSGTLTATELGKVAASYYVTHNSMAIYNRLLM 1044
Query: 217 AKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCTDPHAKANVLLQA 396
+ L + + + E+ +PVR E+ + K++ I + + +P AK N LLQ+
Sbjct: 1045 QTTSFIELFRVFSFSDEFKHIPVREEEKVELAKLLERVPIPI-RERLDEPAAKINALLQS 1103
Query: 397 HFSRHVVTN-VLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEMSQMVTQGLWEN 573
+ SR + L D V A R+++A+ ++ GW + A +++ +M+ + LW
Sbjct: 1104 YISRQRLDGFALVADMVYVTQSAGRIMRAIFEISLRRGWSSVATLSLDTCKMIEKRLWPT 1163
Query: 574 DSVLLQLPHFTKELAKK 624
S L Q P+ E+ ++
Sbjct: 1164 MSPLRQFPNCPSEVIRR 1180
>sp|Q8N3C0|HELC1_HUMAN Activating signal cointegrator 1 complex
subunit 3 OS=Homo sapiens GN=ASCC3 PE=1 SV=3
Length = 2202
Score = 126 bits (317), Expect = 9e-29
Identities = 85/234 (36%), Positives = 117/234 (50%), Gaps = 12/234 (5%)
Frame = +1
Query: 4 NPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAI-EDDMDLSPLNLGMIAXXXXXX 180
NP+YYNL SH ++ LS L+E +L +LE S CI I ED+ + PL G IA
Sbjct: 1766 NPSYYNLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLK 1825
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
++F L + + LL IL+ A EY+ LPVR E+ ++ +
Sbjct: 1826 HQTVKMFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPIESNPHSFD 1885
Query: 361 DPHAKANVLLQAHFSRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPALAAME 537
PH KA++LLQAH SR ++ D + VL A R+ QAM+DV ++ GWL L
Sbjct: 1886 SPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAANQGWLVTVLNITN 1945
Query: 538 MSQMVTQGLWENDSVLLQLPHFT----------KELAKKCHENPGKSIETVFEL 669
+ QMV QG W DS LL LP+ K + K H SIE++ EL
Sbjct: 1946 LIQMVIQGRWLKDSSLLTLPNIENHHLHLFKKWKPIMKGPHARGRTSIESLPEL 1999
>sp|P32639|BRR2_YEAST Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces
cerevisiae GN=BRR2 PE=1 SV=2
Length = 2163
Score = 120 bits (300), Expect = 8e-27
Identities = 79/241 (32%), Positives = 133/241 (55%), Gaps = 19/241 (7%)
Frame = +1
Query: 4 NPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMD----------------L 135
NP+YY ++ TS +S LS LVE L+DL S I I+D +
Sbjct: 1785 NPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEII 1844
Query: 136 SPLNLGMIAXXXXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRK 315
S L+ G+IA + F SSL+ S +K +L +L++A E+ +P+R G+ + K
Sbjct: 1845 STLSNGLIASHYGVSFFTIQSFVSSLSNTSTLKNMLYVLSTAVEFESVPLRKGDRALLVK 1904
Query: 316 MINHQRFGIDKPKCTDPHA---KANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMV 486
+ +R + P+ T + K +LLQA+FSR + D +++L L+ +V
Sbjct: 1905 L--SKRLPLRFPEHTSSGSVSFKVFLLLQAYFSRLELPVDFQNDLKDILEKVVPLINVVV 1962
Query: 487 DVISSNGWLNPALAAMEMSQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFE 666
D++S+NG+LN A AM+++QM+ QG+W+ D+ L Q+PHF ++ +KC E ++ETV++
Sbjct: 1963 DILSANGYLN-ATTAMDLAQMLIQGVWDVDNPLRQIPHFNNKILEKCKE---INVETVYD 2018
Query: 667 L 669
+
Sbjct: 2019 I 2019
Score = 60.5 bits (145), Expect = 8e-09
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Frame = +1
Query: 31 TSHRHLSDHLSELVENTLSDLETSKCIAIEDDMD-LSPLNLGMIAXXXXXXXXXXELFSS 207
+S L LV + L L+ + + + + D + +LG IA ++++
Sbjct: 961 SSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASSFYINHASMDVYNR 1020
Query: 208 SLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCTDPHAKANVL 387
L + L I + + E+ + VR E+ +++++ I + DP AK NVL
Sbjct: 1021 ELDEHTTQIDLFRIFSMSEEFKYVSVRYEEKRELKQLLEKAPIPI-REDIDDPLAKVNVL 1079
Query: 388 LQAHFSRHVVTNVLALDQREVLL--DASRLLQAMVDVISSNGWLNPALAAMEMSQMVTQG 561
LQ++FS+ + AL+ V + +A RLL+AM ++ GW +P + + + T
Sbjct: 1080 LQSYFSQ-LKFEGFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRMLLNLCKSATTK 1138
Query: 562 LWENDSVLLQLPHFTKELAKK 624
+W + L Q E+ K+
Sbjct: 1139 MWPTNCPLRQFKTCPVEVIKR 1159
>sp|P53327|SLH1_YEAST Antiviral helicase SLH1 OS=Saccharomyces
cerevisiae GN=SLH1 PE=1 SV=1
Length = 1967
Score = 92.0 bits (227), Expect = 2e-18
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Frame = +1
Query: 4 NPNYYNLQG-TSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
NP YY ++ TS +S+HLS L+++TL +L S+C+ + D ++ L + +
Sbjct: 1581 NPTYYGIEDDTSTAGVSEHLSSLIDSTLENLRESQCVLLHGDDIVATPFLSISSYYYISH 1640
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKP--- 351
+L + + + +L L+ A EY++LPVR GE +M R+ ++
Sbjct: 1641 LTIRQLLKQ-IHDHATFQEVLRWLSLAVEYNELPVRGGEIIMNEEMSQQSRYSVESTFTD 1699
Query: 352 ----KCTDPHAKANVLLQAHFSRHVVTNVLALDQREVLLDAS-RLLQAMVDVISSNGWLN 516
DPH K +LLQAH SR + + +LD S R+LQA +DV S G+ +
Sbjct: 1700 EFELPMWDPHVKTFLLLQAHLSRVDLPIADYIQDTVSVLDQSLRILQAYIDVASELGYFH 1759
Query: 517 PALAAMEMSQMVTQGLWENDSVLLQLP 597
L ++M Q + QG W D + LP
Sbjct: 1760 TVLTMIKMMQCIKQGYWYEDDPVSVLP 1786
Score = 44.3 bits (103), Expect = 6e-04
Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Frame = +1
Query: 118 EDDMDLSPLNLGMIAXXXXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGE 297
E M +LG ++ E+F+ ++ +L +++ +SE+ + R E
Sbjct: 788 EVSMHFIAKDLGRVSSDFYLLNESVEIFNQMCDPRATEADVLSMISMSSEFDGIKFREEE 847
Query: 298 EETIRKMINHQRFGIDKPKCTDPHAKANVLLQAHFSR-HVVTNVLALDQREVLLDASRLL 474
+ ++++ + + P KANVLLQA+ S+ + + L+ D V ++ R+
Sbjct: 848 SKELKRLSDESVECQIGSQLDTPQGKANVLLQAYISQTRIFDSALSSDSNYVAQNSVRIC 907
Query: 475 QAMVDVISSNGWLNPALAAMEMSQMVTQGLWENDSVLLQ 591
+A+ + + W + + + + + + LW D L Q
Sbjct: 908 RALFLIGVNRRWGKFSNVMLNICKSIEKRLWAFDHPLCQ 946
>sp|O60072|MUG81_SCHPO Putative helicase mug81 OS=Schizosaccharomyces
pombe GN=mug81 PE=1 SV=1
Length = 1935
Score = 81.6 bits (200), Expect = 3e-15
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNP YY G + + +LS+LV ++LE S CI ++ +P LG I
Sbjct: 1572 QNPVYYGADGDDQKSIDTYLSKLVVTAFNELEKSACIYRVNEETYAPTTLGRIVSYYYLF 1631
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEE---ETIRKMINHQRFGIDKP 351
F +T ++ L++LA ASE+ L +R E+ I K + + ++ P
Sbjct: 1632 HTTIRNFVQKITENAEFDLALQLLAEASEFDDLAIRHNEDLINIEINKSLKYSAACLNLP 1691
Query: 352 KCTDPHAKANVLLQAHFSR-HVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALA 528
D H KA +L QAH +R + + D VL R++Q+ +DV + G+ + L
Sbjct: 1692 -MVDAHVKAFILTQAHMARLKLPVDDYVTDTSTVLDQVIRIIQSYIDVSAELGYSHVCLQ 1750
Query: 529 AMEMSQMVTQGLWENDSVLLQLPHFTKELAKKCHE 633
+ + Q + Q + ++ LP K+ +
Sbjct: 1751 YISLMQCLKQACYPSEIYRASLPGLNASSEKEARD 1785
Score = 58.9 bits (141), Expect = 2e-08
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Frame = +1
Query: 133 LSPLNLGMIAXXXXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIR 312
L P +LG IA ++ L +K ++ +L+ SE+SQ+ R E +
Sbjct: 785 LIPKDLGRIASNYYINYQTVSTLNNLLKSKMSEADIIALLSQCSEFSQIKSRENEHRELE 844
Query: 313 KMINHQRFGIDKPKCTDPHAKANVLLQAHFSR-HVVTNVLALDQREVLLDASRLLQAMVD 489
++ + + ++ K NV+LQ++ SR HV L D V +A R+ +A+ +
Sbjct: 845 SLMENSSPCQLRDSISNTSGKVNVILQSYISRAHVEDFTLTSDTNYVAQNAGRITRALFE 904
Query: 490 VISSNGWLNPALAAMEMSQMVTQGLWENDSVLLQ--LPHFTKELAKKCHENPGK-SIETV 660
+ S W + A + +++ + + W + LLQ LPH +LA K G S+E +
Sbjct: 905 IAMSRTWAS-AFTILSLNKSIDRRQWSFEHPLLQFDLPH---DLAVKVENQCGSLSLEEL 960
Query: 661 FEL 669
++
Sbjct: 961 SDM 963
>sp|Q5R660|SEC63_PONAB Translocation protein SEC63 homolog OS=Pongo
abelii GN=SEC63 PE=2 SV=1
Length = 761
Score = 62.0 bits (149), Expect = 3e-09
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Frame = +1
Query: 214 TAKSKMKGLLEILASASEYS-----QLPVRPGEEETIRKMINHQ---RFGIDKPKCTDPH 369
T MK L+ +LA ASE+ RP + I ++I ++P T P+
Sbjct: 238 TRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPPLTCPY 297
Query: 370 A-KANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVI----------SSNGWLN 516
+ KA VLL +H +R + L DQ+ +L LLQ MV+VI +
Sbjct: 298 SLKARVLLLSHLARMKIPETLEEDQQFMLKKCPALLQEMVNVICQLIVMARNREEREFRA 357
Query: 517 PALAAME----MSQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
P LA++E +SQM QGL + S LLQLPH ++ ++ + I+T+ +L
Sbjct: 358 PTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQDL 412
>sp|Q9UGP8|SEC63_HUMAN Translocation protein SEC63 homolog OS=Homo
sapiens GN=SEC63 PE=1 SV=2
Length = 760
Score = 62.0 bits (149), Expect = 3e-09
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Frame = +1
Query: 214 TAKSKMKGLLEILASASEYS-----QLPVRPGEEETIRKMINHQ---RFGIDKPKCTDPH 369
T MK L+ +LA ASE+ RP + I ++I ++P T P+
Sbjct: 238 TRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPPLTCPY 297
Query: 370 A-KANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVI----------SSNGWLN 516
+ KA VLL +H +R + L DQ+ +L LLQ MV+VI +
Sbjct: 298 SLKARVLLLSHLARMKIPETLEEDQQFMLKKCPALLQEMVNVICQLIVMARNREEREFRA 357
Query: 517 PALAAME----MSQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
P LA++E +SQM QGL + S LLQLPH ++ ++ + I+T+ +L
Sbjct: 358 PTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQDL 412
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7QM75 |
| Definition |
tr|A7QM75|A7QM75_VITVI Chromosome chr5 scaffold_124, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
223 |
| Score (bit) |
357.0 |
| E-value |
5.0e-97 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960375|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_D24, 5'
(671 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7QM75|A7QM75_VITVI Chromosome chr5 scaffold_124, whole genom... 357 5e-97
tr|A5BZG5|A5BZG5_VITVI Putative uncharacterized protein OS=Vitis... 357 5e-97
tr|A9RTW1|A9RTW1_PHYPA Predicted protein OS=Physcomitrella paten... 349 1e-94
tr|Q9SYP1|Q9SYP1_ARATH F9H16.5 protein OS=Arabidopsis thaliana G... 343 6e-93
tr|Q8W577|Q8W577_ARATH At1g20960/F9H16_5 OS=Arabidopsis thaliana... 343 6e-93
tr|Q0E4P2|Q0E4P2_ORYSJ Os02g0107000 protein (Fragment) OS=Oryza ... 322 2e-86
tr|A3A293|A3A293_ORYSJ Putative uncharacterized protein OS=Oryza... 322 2e-86
tr|A2WZV9|A2WZV9_ORYSI Putative uncharacterized protein OS=Oryza... 320 4e-86
tr|Q93YW2|Q93YW2_ARATH Putative ATP-dependent RNA helicase (Frag... 319 9e-86
tr|O48534|O48534_ARATH Putative ATP-dependent RNA helicase OS=Ar... 319 9e-86
tr|Q84MP1|Q84MP1_ORYSJ Putative Sec63 domain containing protein ... 290 6e-77
tr|A3AMK8|A3AMK8_ORYSJ Putative uncharacterized protein OS=Oryza... 290 6e-77
tr|B8AJU4|B8AJU4_ORYSI Putative uncharacterized protein OS=Oryza... 287 4e-76
tr|B0S754|B0S754_DANRE Novel protein similar to vertebrate activ... 261 4e-68
tr|A8WFW1|A8WFW1_DANRE LOC799690 protein (Fragment) OS=Danio rer... 261 4e-68
tr|A4FVI6|A4FVI6_DANRE LOC560626 protein (Fragment) OS=Danio rer... 261 4e-68
tr|B7PL00|B7PL00_IXOSC Antiviral helicase Slh1, putative OS=Ixod... 260 6e-68
tr|Q7TMG2|Q7TMG2_MOUSE Ascc3l1 protein (Fragment) OS=Mus musculu... 258 2e-67
tr|Q6P4T2|Q6P4T2_MOUSE Activating signal cointegrator 1 complex ... 258 2e-67
tr|Q69ZZ3|Q69ZZ3_MOUSE MKIAA0788 protein (Fragment) OS=Mus muscu... 258 2e-67
tr|Q9UNV9|Q9UNV9_HUMAN Putative RNA helicase OS=Homo sapiens PE=... 258 2e-67
tr|Q7L5W4|Q7L5W4_HUMAN ASCC3L1 protein (Fragment) OS=Homo sapien... 258 2e-67
tr|B4E150|B4E150_HUMAN cDNA FLJ55548, highly similar to U5 small... 258 2e-67
tr|B4E0P5|B4E0P5_HUMAN cDNA FLJ56901, highly similar to U5 small... 258 2e-67
tr|A4FU77|A4FU77_HUMAN ASCC3L1 protein (Fragment) OS=Homo sapien... 258 2e-67
tr|A2RRQ7|A2RRQ7_HUMAN ASCC3L1 protein OS=Homo sapiens GN=ASCC3L... 258 2e-67
tr|B0BMR2|B0BMR2_XENTR LOC100145098 protein (Fragment) OS=Xenopu... 258 3e-67
tr|B1H1S2|B1H1S2_XENLA LOC100158290 protein OS=Xenopus laevis GN... 256 1e-66
tr|A7RH22|A7RH22_NEMVE Predicted protein OS=Nematostella vectens... 256 1e-66
tr|Q00Z19|Q00Z19_OSTTA DNA polymerase theta/eta, DEAD-box superf... 255 2e-66
>tr|A7QM75|A7QM75_VITVI Chromosome chr5 scaffold_124, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001949001
PE=4 SV=1
Length = 2072
Score = 357 bits (915), Expect = 5e-97
Identities = 176/223 (78%), Positives = 193/223 (86%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG SHRHLSDHLSE VENTLSDLE SKC+AIEDDMDLSPLNLGMIA
Sbjct: 1695 QNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYIS 1754
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSSSLT+K+KMKGLLEILASASEY+Q+P+RPGEE+ IR++INHQRF + PKCT
Sbjct: 1755 YTTIERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCT 1814
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSR +V LALDQREVLL A RLLQAMVDVISSNGWLN AL AME+
Sbjct: 1815 DPHIKANALLQAHFSRQIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEV 1874
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+WE DS+LLQLPHFTK+LAK+C ENPGKSIETVF+L
Sbjct: 1875 SQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDL 1917
Score = 55.5 bits (132), Expect = 3e-06
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 5/213 (2%)
Frame = +1
Query: 1 QNPNYYNLQG---TSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPL-NLGMIAXX 168
+NP Y L T L + ++L+ + L+ + + + + +LG IA
Sbjct: 857 RNPTLYGLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASY 916
Query: 169 XXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDK 348
++ L L + + + E+ + VR E+ + K+++ I K
Sbjct: 917 YYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPI-K 975
Query: 349 PKCTDPHAKANVLLQAHFSRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPAL 525
+P AK NVLLQA+ S+ + + L D + A RL++A+ +++ GW
Sbjct: 976 ESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTE 1035
Query: 526 AAMEMSQMVTQGLWENDSVLLQLPHFTKELAKK 624
A+ + +MV + +W + L Q E+ K
Sbjct: 1036 KALNLCKMVNKRMWSVQTPLRQFNAIPNEILMK 1068
>tr|A5BZG5|A5BZG5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_042645 PE=4 SV=1
Length = 2144
Score = 357 bits (915), Expect = 5e-97
Identities = 176/223 (78%), Positives = 193/223 (86%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG SHRHLSDHLSE VENTLSDLE SKC+AIEDDMDLSPLNLGMIA
Sbjct: 1767 QNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYIS 1826
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSSSLT+K+KMKGLLEILASASEY+Q+P+RPGEE+ IR++INHQRF + PKCT
Sbjct: 1827 YTTIERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCT 1886
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSR +V LALDQREVLL A RLLQAMVDVISSNGWLN AL AME+
Sbjct: 1887 DPHIKANALLQAHFSRQIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEV 1946
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+WE DS+LLQLPHFTK+LAK+C ENPGKSIETVF+L
Sbjct: 1947 SQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDL 1989
Score = 55.5 bits (132), Expect = 3e-06
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 5/213 (2%)
Frame = +1
Query: 1 QNPNYYNLQG---TSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPL-NLGMIAXX 168
+NP Y L T L + ++L+ + L+ + + + + +LG IA
Sbjct: 929 RNPTLYGLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASY 988
Query: 169 XXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDK 348
++ L L + + + E+ + VR E+ + K+++ I K
Sbjct: 989 YYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPI-K 1047
Query: 349 PKCTDPHAKANVLLQAHFSRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPAL 525
+P AK NVLLQA+ S+ + + L D + A RL++A+ +++ GW
Sbjct: 1048 ESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTE 1107
Query: 526 AAMEMSQMVTQGLWENDSVLLQLPHFTKELAKK 624
A+ + +MV + +W + L Q E+ K
Sbjct: 1108 KALNLCKMVNKRMWSVQTPLRQFNAIPNEILMK 1140
>tr|A9RTW1|A9RTW1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_205535 PE=4 SV=1
Length = 2180
Score = 349 bits (895), Expect = 1e-94
Identities = 170/223 (76%), Positives = 198/223 (88%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG SHRHLSDHLSELVE+TLSDLE+SKC+AIEDDMDLSPLNLGMIA
Sbjct: 1798 QNPNYYNLQGVSHRHLSDHLSELVESTLSDLESSKCVAIEDDMDLSPLNLGMIAAYYYIS 1857
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
ELFSSSLTAK+K+KGLLEIL++ASEY++LP+RPGE+E IRK++ HQRF +DKPK T
Sbjct: 1858 YTTIELFSSSLTAKTKLKGLLEILSNASEYTRLPMRPGEDELIRKLVMHQRFSMDKPKFT 1917
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHF+RH V+ LALDQR++L+DASRL+QAMVDVISS+GWL+PALAAME+
Sbjct: 1918 DPHVKANALLQAHFARHSVSGNLALDQRDILIDASRLIQAMVDVISSSGWLHPALAAMEL 1977
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQGLWE DS LLQLP+FTK+LAKKC +NP K I+TVF+L
Sbjct: 1978 SQMVTQGLWERDSYLLQLPYFTKDLAKKCADNPDKPIQTVFDL 2020
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = +1
Query: 238 LLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCTDPHAKANVLLQAHFSRHVV 417
L + + + E+ + VR E+ + K+++ + K +P AK NVLLQA+ S+ +
Sbjct: 1044 LCRLFSLSEEFKFVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQAYISQLKL 1102
Query: 418 TNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEMSQMVTQGLWENDSVLLQL 594
+ L D + A RL++A+ +++ GW A A+ + +MV++ +W + + L Q
Sbjct: 1103 EGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALTLCKMVSRRMWSSQTPLRQF 1162
Query: 595 PHFTKELAKK 624
++ K
Sbjct: 1163 KGIPNDILSK 1172
>tr|Q9SYP1|Q9SYP1_ARATH F9H16.5 protein OS=Arabidopsis thaliana
GN=At1g20960 PE=4 SV=1
Length = 2171
Score = 343 bits (880), Expect = 6e-93
Identities = 166/223 (74%), Positives = 190/223 (85%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG SHRHLSDHLSELVENTLSDLE SKCI +ED+M+LSPLNLGMIA
Sbjct: 1793 QNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCIEVEDEMELSPLNLGMIASYYYIS 1852
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS L++K+KMKGLLEIL SASEY +P+RPGEE+T+R++INHQRF + PKCT
Sbjct: 1853 YTTIERFSSLLSSKTKMKGLLEILTSASEYDMIPIRPGEEDTVRRLINHQRFSFENPKCT 1912
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSR + LA+DQR+VLL A+RLLQAMVDVISSNGWLN AL AME+
Sbjct: 1913 DPHVKANALLQAHFSRQNIGGNLAMDQRDVLLSATRLLQAMVDVISSNGWLNLALLAMEV 1972
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+WE DS+LLQLPHFTK+LAK+C ENPGK+IETVF+L
Sbjct: 1973 SQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETVFDL 2015
Score = 56.2 bits (134), Expect = 2e-06
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 5/210 (2%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRH---LSDHLSELVENTLSDLETSKCIAIEDDMDLSPL-NLGMIAXX 168
+NP Y L + L + ++L+ + + L+ + + + + +LG IA
Sbjct: 955 RNPTLYGLAPDALAKDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASY 1014
Query: 169 XXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDK 348
++ L L + + + E+ + VR E+ + K+++ I K
Sbjct: 1015 YYITHGTIATYNEHLKPTMGDIDLYRLFSLSDEFKYVTVRQDEKMELAKLLDRVPIPI-K 1073
Query: 349 PKCTDPHAKANVLLQAHFSRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPAL 525
+P AK NVLLQA+ S+ + + L D + A RL++A+ +++ GW A
Sbjct: 1074 ETLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAE 1133
Query: 526 AAMEMSQMVTQGLWENDSVLLQLPHFTKEL 615
A+ +S+MV + +W + L Q + ++
Sbjct: 1134 KALNLSKMVGKRMWSVQTPLRQFHGLSNDI 1163
>tr|Q8W577|Q8W577_ARATH At1g20960/F9H16_5 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 569
Score = 343 bits (880), Expect = 6e-93
Identities = 166/223 (74%), Positives = 190/223 (85%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNLQG SHRHLSDHLSELVENTLSDLE SKCI +ED+M+LSPLNLGMIA
Sbjct: 191 QNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCIEVEDEMELSPLNLGMIASYYYIS 250
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS L++K+KMKGLLEIL SASEY +P+RPGEE+T+R++INHQRF + PKCT
Sbjct: 251 YTTIERFSSLLSSKTKMKGLLEILTSASEYDMIPIRPGEEDTVRRLINHQRFSFENPKCT 310
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSR + LA+DQR+VLL A+RLLQAMVDVISSNGWLN AL AME+
Sbjct: 311 DPHVKANALLQAHFSRQNIGGNLAMDQRDVLLSATRLLQAMVDVISSNGWLNLALLAMEV 370
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+WE DS+LLQLPHFTK+LAK+C ENPGK+IETVF+L
Sbjct: 371 SQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETVFDL 413
>tr|Q0E4P2|Q0E4P2_ORYSJ Os02g0107000 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os02g0107000 PE=4 SV=1
Length = 392
Score = 322 bits (824), Expect = 2e-86
Identities = 158/223 (70%), Positives = 182/223 (81%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
+NPNYYNLQG SHRHLSDHLSELVE L+DLE+SKC+AIE+DM L PLNLG+IA
Sbjct: 18 KNPNYYNLQGVSHRHLSDHLSELVETVLNDLESSKCVAIEEDMYLKPLNLGLIASYYYIS 77
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS LT K+KMKGLLEILASASEY++LP RPGEE+ I K++ HQRF I+KPK
Sbjct: 78 YTTIERFSSMLTQKTKMKGLLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPKYG 137
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSRH + LA DQRE+LL A RLLQAMVDVISSNGWL AL AME+
Sbjct: 138 DPHVKANALLQAHFSRHTILGNLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMEL 197
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+W+ DSVLLQLPHFTKELA++C EN G+ IE++F+L
Sbjct: 198 SQMVTQGMWDRDSVLLQLPHFTKELARRCQENEGRPIESIFDL 240
>tr|A3A293|A3A293_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_004915 PE=4 SV=1
Length = 2240
Score = 322 bits (824), Expect = 2e-86
Identities = 158/223 (70%), Positives = 182/223 (81%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
+NPNYYNLQG SHRHLSDHLSELVE L+DLE+SKC+AIE+DM L PLNLG+IA
Sbjct: 1866 KNPNYYNLQGVSHRHLSDHLSELVETVLNDLESSKCVAIEEDMYLKPLNLGLIASYYYIS 1925
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS LT K+KMKGLLEILASASEY++LP RPGEE+ I K++ HQRF I+KPK
Sbjct: 1926 YTTIERFSSMLTQKTKMKGLLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPKYG 1985
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSRH + LA DQRE+LL A RLLQAMVDVISSNGWL AL AME+
Sbjct: 1986 DPHVKANALLQAHFSRHTILGNLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMEL 2045
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+W+ DSVLLQLPHFTKELA++C EN G+ IE++F+L
Sbjct: 2046 SQMVTQGMWDRDSVLLQLPHFTKELARRCQENEGRPIESIFDL 2088
Score = 66.2 bits (160), Expect = 2e-09
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Frame = +1
Query: 1 QNPNYYNLQGT---SHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPL-NLGMIAXX 168
+NP Y L + + L + ++LV + + L+ + I + + +LG IA
Sbjct: 1029 RNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASY 1088
Query: 169 XXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDK 348
++ L L + + + E+ + VR E+ + K+++ + K
Sbjct: 1089 YYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPV-K 1147
Query: 349 PKCTDPHAKANVLLQAHFSRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPAL 525
+P AK NVLLQA+ SR + + L+ D + A RLL+A+ +++ GW A
Sbjct: 1148 ESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAE 1207
Query: 526 AAMEMSQMVTQGLWENDSVLLQLPHFTKELAKK 624
A+ + +M+ + +W + L Q P KE+ K
Sbjct: 1208 KALNLCKMIDKQMWNVQTPLRQFPGIPKEILMK 1240
>tr|A2WZV9|A2WZV9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05501 PE=4 SV=1
Length = 2177
Score = 320 bits (821), Expect = 4e-86
Identities = 157/223 (70%), Positives = 182/223 (81%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
+NPNYYNLQG SHRHLSDHLSELVE L+DLE+SKC+AIE+DM L PLNLG+IA
Sbjct: 1803 KNPNYYNLQGVSHRHLSDHLSELVETVLNDLESSKCVAIEEDMYLKPLNLGLIASYYYIS 1862
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS LT K+KMKGLLEILASASEY++LP RPGEE+ I K++ HQRF I+KP+
Sbjct: 1863 YTTIERFSSMLTQKTKMKGLLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPRYG 1922
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DPH KAN LLQAHFSRH + LA DQRE+LL A RLLQAMVDVISSNGWL AL AME+
Sbjct: 1923 DPHVKANALLQAHFSRHTILGNLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMEL 1982
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+W+ DSVLLQLPHFTKELA++C EN G+ IE++F+L
Sbjct: 1983 SQMVTQGMWDRDSVLLQLPHFTKELARRCQENEGRPIESIFDL 2025
Score = 66.2 bits (160), Expect = 2e-09
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Frame = +1
Query: 1 QNPNYYNLQGT---SHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPL-NLGMIAXX 168
+NP Y L + + L + ++LV + + L+ + I + + +LG IA
Sbjct: 966 RNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASY 1025
Query: 169 XXXXXXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDK 348
++ L L + + + E+ + VR E+ + K+++ + K
Sbjct: 1026 YYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPV-K 1084
Query: 349 PKCTDPHAKANVLLQAHFSRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPAL 525
+P AK NVLLQA+ SR + + L+ D + A RLL+A+ +++ GW A
Sbjct: 1085 ESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAE 1144
Query: 526 AAMEMSQMVTQGLWENDSVLLQLPHFTKELAKK 624
A+ + +M+ + +W + L Q P KE+ K
Sbjct: 1145 KALNLCKMIDKQMWNVQTPLRQFPGIPKEILMK 1177
>tr|Q93YW2|Q93YW2_ARATH Putative ATP-dependent RNA helicase
(Fragment) OS=Arabidopsis thaliana GN=At2g42270 PE=2
SV=2
Length = 617
Score = 319 bits (818), Expect = 9e-86
Identities = 155/223 (69%), Positives = 182/223 (81%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNL G SHRHLSDHLSELVENTLSDLE SKCI I++++DLSPLNLGMIA
Sbjct: 239 QNPNYYNLLGVSHRHLSDHLSELVENTLSDLEVSKCIEIDNELDLSPLNLGMIASYYYIN 298
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS L +K+KMKGLLEIL SASEY +P+RPGEE+ +R++INHQRF P+CT
Sbjct: 299 YTTIERFSSLLASKTKMKGLLEILTSASEYDLIPIRPGEEDAVRRLINHQRFSFQNPRCT 358
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DP K + LLQAHFSR ++ L +DQ EVLL A+RLLQAMVDVISSNG LN AL AME+
Sbjct: 359 DPRVKTSALLQAHFSRQKISGNLVMDQCEVLLSATRLLQAMVDVISSNGCLNLALLAMEV 418
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+W+ DS+LLQLPHFTK+LAK+CHENPG +IET+F+L
Sbjct: 419 SQMVTQGMWDRDSMLLQLPHFTKDLAKRCHENPGNNIETIFDL 461
>tr|O48534|O48534_ARATH Putative ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g42270 PE=4 SV=1
Length = 2172
Score = 319 bits (818), Expect = 9e-86
Identities = 155/223 (69%), Positives = 182/223 (81%)
Frame = +1
Query: 1 QNPNYYNLQGTSHRHLSDHLSELVENTLSDLETSKCIAIEDDMDLSPLNLGMIAXXXXXX 180
QNPNYYNL G SHRHLSDHLSELVENTLSDLE SKCI I++++DLSPLNLGMIA
Sbjct: 1794 QNPNYYNLLGVSHRHLSDHLSELVENTLSDLEVSKCIEIDNELDLSPLNLGMIASYYYIN 1853
Query: 181 XXXXELFSSSLTAKSKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCT 360
E FSS L +K+KMKGLLEIL SASEY +P+RPGEE+ +R++INHQRF P+CT
Sbjct: 1854 YTTIERFSSLLASKTKMKGLLEILTSASEYDLIPIRPGEEDAVRRLINHQRFSFQNPRCT 1913
Query: 361 DPHAKANVLLQAHFSRHVVTNVLALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEM 540
DP K + LLQAHFSR ++ L +DQ EVLL A+RLLQAMVDVISSNG LN AL AME+
Sbjct: 1914 DPRVKTSALLQAHFSRQKISGNLVMDQCEVLLSATRLLQAMVDVISSNGCLNLALLAMEV 1973
Query: 541 SQMVTQGLWENDSVLLQLPHFTKELAKKCHENPGKSIETVFEL 669
SQMVTQG+W+ DS+LLQLPHFTK+LAK+CHENPG +IET+F+L
Sbjct: 1974 SQMVTQGMWDRDSMLLQLPHFTKDLAKRCHENPGNNIETIFDL 2016
Score = 66.2 bits (160), Expect = 2e-09
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Frame = +1
Query: 46 LSDHLSELVENTLSDLETSKCIAIEDDMD-LSPLNLGMIAXXXXXXXXXXELFSSSLTAK 222
L + ++L+ + + L+ + I + +LG IA ++ +L
Sbjct: 974 LEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGRIASYYYISHGTIAAYNENLKPT 1033
Query: 223 SKMKGLLEILASASEYSQLPVRPGEEETIRKMINHQRFGIDKPKCTDPHAKANVLLQAHF 402
L + + + E+ + VR E+ + K+++ + K DP AK NVLLQ +
Sbjct: 1034 MNDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KETLEDPSAKINVLLQVYI 1092
Query: 403 SRHVVTNV-LALDQREVLLDASRLLQAMVDVISSNGWLNPALAAMEMSQMVTQGLWENDS 579
S+ + + L D + A RLL+A+ +++ GW + A+ +S+MV + +W +
Sbjct: 1093 SKLKLEGLSLTSDMVYITQSAGRLLRAIFEIVLKRGWAQLSQKALNLSKMVGKRMWSVQT 1152
Query: 580 VLLQLPHFTKELAKKCHEN 636
L Q P KE+ K +N
Sbjct: 1153 PLWQFPGIPKEILMKLEKN 1171
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