DK960384 |
Clone id |
TST39A01NGRL0007_E09 |
Library |
TST39 |
Length |
619 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_E09. 5' end sequence. |
Accession |
DK960384 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCATGAACTACATTGACATTTAGAGATCCATCGCGCATGCTGCTGCCAGGATCTCCATCA CCGGCTTCTTCCCAGTGCTGAAGTATCTTCAGGCAAGTTACAAGAGGGTGGTTCAAAGGA CTGGAGGCTTAAACATGATGGGACCAGAGGATGAAAGTGAGCATGAGAATGCCAATTTTT ATTCAAGTGATGCAATGGAAAGCTTAGTTTTGGACTCCTCTCCACATCCATTGATATCAA GCAGTGATTACAAAAGCACCATGTCAGGAACATTGCCAGCAATGGAGGATTCTCACCCTC TTTCTGGTTTTAGAGAAGAAAAGGAAGAAGATTTATTTGATGACCGTTACAGAAACTCTA CACTCAAGAAACCCACATCAAGCAATGGTCAGGAGGATCCACTTGTTGAGCCTCCTTCTT ACGCTGATGTCATCTTTAGTCCTTATACCTCCAGAGAGTCTTCTTTCAGCAGAAATGGGA ATGTGAAAGCCGTTGGACTGCCATTGTCATCACCTTCATCATCTTCTTCATTCTCAGAAT ATCTAACGATTACTGTCTCGCAGCCACAAAAGATGCAGGACACCACAAACACGTCCATAG TACCTGGCAGTAACACATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q80X08 |
Definition |
sp|Q80X08|FAM21_RAT Protein FAM21 OS=Rattus norvegicus |
Align length |
107 |
Score (bit) |
34.3 |
E-value |
0.53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SGG6 |
Definition |
tr|A9SGG6|A9SGG6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
142 |
Score (bit) |
85.9 |
E-value |
2.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960384|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_E09, 5' (619 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SGG6|A9SGG6_PHYPA Predicted protein OS=Physcomitrella paten... 86 2e-15 tr|A7NY69|A7NY69_VITVI Chromosome chr6 scaffold_3, whole genome ... 67 1e-09 tr|Q570X1|Q570X1_ARATH Putative uncharacterized protein At5g0712... 64 5e-09 tr|Q8L5Z7|Q8L5Z7_ARATH Putative uncharacterized protein At5g5844... 62 2e-08 tr|Q9LYQ3|Q9LYQ3_ARATH Putative uncharacterized protein T28J14_6... 58 5e-07 tr|A7Q3Q2|A7Q3Q2_VITVI Chromosome chr13 scaffold_48, whole genom... 55 3e-06 tr|Q9FGH8|Q9FGH8_ARATH Similarity to sorting nexin OS=Arabidopsi... 55 3e-06 tr|Q7PY01|Q7PY01_ANOGA AGAP001678-PA OS=Anopheles gambiae GN=AGA... 39 0.32 tr|Q4JSB7|Q4JSB7_ANOGA Tensin OS=Anopheles gambiae GN=D1.3 PE=4 ... 39 0.32 tr|Q54HI6|Q54HI6_DICDI Putative uncharacterized protein OS=Dicty... 36 1.6 tr|Q5W6R5|Q5W6R5_ORYSJ Os05g0346100 protein OS=Oryza sativa subs... 35 2.7 tr|A3B2X8|A3B2X8_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.7 tr|A2Y3G2|A2Y3G2_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.7 tr|Q6CRK0|Q6CRK0_KLULA KLLA0D08459p OS=Kluyveromyces lactis GN=K... 35 2.7 tr|A6APU6|A6APU6_VIBHA Putative Mcf2 OS=Vibrio harveyi HY01 GN=A... 35 3.5 tr|A4I1N0|A4I1N0_LEIIN Putative uncharacterized protein OS=Leish... 35 4.6 tr|Q6DRP8|Q6DRP8_DANRE Nop14-like OS=Danio rerio GN=nop14 PE=2 SV=1 34 6.0 tr|A5ZAH8|A5ZAH8_9FIRM Putative uncharacterized protein OS=Eubac... 34 6.0 tr|A4QSK4|A4QSK4_MAGGR Predicted protein OS=Magnaporthe grisea G... 34 6.0 tr|A2QUD9|A2QUD9_ASPNC Function: catalyzes synthesis of D-erythr... 34 6.0 tr|Q9A7N2|Q9A7N2_CAUCR Putative uncharacterized protein OS=Caulo... 34 7.8 tr|B8GVQ5|B8GVQ5_CAUCR Organic solvent tolerance protein OS=Caul... 34 7.8 tr|Q25253|Q25253_LUCCU Notch homolog Scalloped wings OS=Lucilia ... 34 7.8 tr|B7PJL6|B7PJL6_IXOSC Sterol regulatory element-binding protein... 34 7.8 tr|Q8FC59|Q8FC59_ECOL6 Putative conserved protein OS=Escherichia... 34 7.9 tr|A1AJ33|A1AJ33_ECOK1 Putative uncharacterized protein OS=Esche... 34 7.9 tr|B7MZS1|B7MZS1_ECOLX Putative Orn/Lys/Arg decarboxylase OS=Esc... 34 7.9 tr|B7MKS9|B7MKS9_ECOLX Putative Orn/Lys/Arg decarboxylase OS=Esc... 34 7.9 tr|B3WX15|B3WX15_SHIDY Biodegradative arginine decarboxylase OS=... 34 7.9
>tr|A9SGG6|A9SGG6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_184701 PE=4 SV=1 Length = 554
Score = 85.9 bits (211), Expect = 2e-15 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 1/142 (0%) Frame = +3
Query: 195 MESLVLDSSPHPLISSSDYKSTMSGTLPAMEDSHPLSGFREEKEEDLFDDRYRNSTLKKP 374 MESL L+ PH +S+SDY+S MSG + +SHPL+ E+ ++F D +R ++ Sbjct: 1 MESLPLEDHPHSYLSTSDYRSAMSGGGSMLHESHPLAA-SPEQPLNMFKDSFRKG-FQET 58
Query: 375 TSSNGQEDPLVEPPSYADVIFSPYTSRESSFSRNGNVKAVG-XXXXXXXXXXXXXEYLTI 551 SN D ++EPPSYAD IFSPY + +S NG+ + +G E L + Sbjct: 59 GRSNSFRDTMIEPPSYADAIFSPYLADDS----NGSARDLGVHASPSFTSSSSFSEILQV 114
Query: 552 TVSQPQKMQDTTNTSIVPGSNT 617 V+ P+K+Q+ +S+VPG + Sbjct: 115 RVTDPEKVQE-PGSSLVPGGTS 135
>tr|A7NY69|A7NY69_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024005001 PE=4 SV=1 Length = 556
Score = 66.6 bits (161), Expect = 1e-09 Identities = 58/152 (38%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Frame = +3
Query: 183 SSDAMESLVLDSSPHPLISSSDYKSTMSGTLPAMEDSHPLSGFREEKEEDLFDDRYRNST 362 S + MESL+LD P S S+Y+S MS A HPLS D D Sbjct: 8 SREEMESLILDE-PLNGTSYSNYRSAMSSLSDA---HHPLSSPMLTTPADT-DPLISPLM 62
Query: 363 LKKPTSSNGQEDPLVEPPSYADVIFSPYTSRESSFSRNGNVKAV-------GXXXXXXXX 521 + + N + VEPPSYADVIFSP+ GNV V Sbjct: 63 YRDFRNPNAPDHSYVEPPSYADVIFSPFEG-----ENGGNVNGVESPSQKSESSMVMSRS 117
Query: 522 XXXXXEYLTITVSQPQKMQDTTNTSIVPGSNT 617 EYL ITVS PQK Q+++N SIVPG NT Sbjct: 118 GSSSSEYLKITVSNPQKEQESSN-SIVPGGNT 148
>tr|Q570X1|Q570X1_ARATH Putative uncharacterized protein At5g07120 (Fragment) OS=Arabidopsis thaliana GN=At5g07120 PE=2 SV=1 Length = 341
Score = 64.3 bits (155), Expect = 5e-09 Identities = 58/174 (33%), Positives = 81/174 (46%), Gaps = 13/174 (7%) Frame = +3
Query: 135 MMGPE-DESEHENANFYSSDAMESLVLDSSPHPLI--------SSSDYKSTMSGTLPAME 287 MMG E DE H ++ S + ME L L PL S+S+Y+S MS + Sbjct: 1 MMGSENDEESHLHS---SKEEMEKLFLREDGDPLTKSNVNGDKSNSNYRSAMS---TLFD 54
Query: 288 DSHPLSGFREEKEEDLFDDRYRNSTLKKPTSSNGQEDPL---VEPPSYADVIFSPYTS-R 455 HP + LF S + P S D + +EPPSYADVIFSP+ Sbjct: 55 SRHPSIVVTPADSDPLFAPPSYYSESRSPRSKPNGGDRVSSYLEPPSYADVIFSPFDDIS 114
Query: 456 ESSFSRNGNVKAVGXXXXXXXXXXXXXEYLTITVSQPQKMQDTTNTSIVPGSNT 617 E + S +G+ ++ +Y+ ITVS PQK Q+ TN S++PG +T Sbjct: 115 EINGSEDGHSQS--SDSLSRSPSSLSSDYIKITVSNPQKEQEATN-SMIPGGST 165
>tr|Q8L5Z7|Q8L5Z7_ARATH Putative uncharacterized protein At5g58440 OS=Arabidopsis thaliana GN=At5g58440 PE=2 SV=1 Length = 587
Score = 62.4 bits (150), Expect = 2e-08 Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 20/181 (11%) Frame = +3
Query: 135 MMGPEDESEHENANFYSS-DAMESLVL--DSSPHPL--------ISSSDYKSTMSGTLPA 281 MMG E+ E N + D ME+L L D HPL S+S Y+S MS TL Sbjct: 1 MMGSENADGFEETNLNAQRDDMENLDLGVDGGDHPLKISDVNGDTSNSGYRSAMS-TLSN 59
Query: 282 MED--SHPLSGFREEKEEDLFD----DRYRNSTLKKPTSSNGQEDPLVEPPSYADVIFSP 443 + D S P + + L + +R+S KP SS ++ +EPPSYADVIFSP Sbjct: 60 VRDPLSPPPTVMIPADSDPLLAPSSYEDFRSSFSSKPISS---DNSYIEPPSYADVIFSP 116
Query: 444 Y---TSRESSFSRNGNVKAVGXXXXXXXXXXXXXEYLTITVSQPQKMQDTTNTSIVPGSN 614 + + E + + + ++ + +Y+ ITVS PQK Q+ +N+ + G N Sbjct: 117 FDENSDSEINGTEDNSLHSQFSDSLSRSPSSSSSDYIKITVSNPQKEQEISNS--IVGGN 174
Query: 615 T 617 T Sbjct: 175 T 175
>tr|Q9LYQ3|Q9LYQ3_ARATH Putative uncharacterized protein T28J14_60 OS=Arabidopsis thaliana GN=T28J14_60 PE=4 SV=1 Length = 554
Score = 57.8 bits (138), Expect = 5e-07 Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 12/153 (7%) Frame = +3
Query: 195 MESLVLDSSPHPLI--------SSSDYKSTMSGTLPAMEDSHPLSGFREEKEEDLFDDRY 350 ME L L PL S+S+Y+S MS + HP + LF Sbjct: 1 MEKLFLREDGDPLTKSNVNGDKSNSNYRSAMS---TLFDSRHPSIVVTPADSDPLFAPPS 57
Query: 351 RNSTLKKPTSSNGQEDPL---VEPPSYADVIFSPYTS-RESSFSRNGNVKAVGXXXXXXX 518 S + P S D + +EPPSYADVIFSP+ E + S +G+ ++ Sbjct: 58 YYSESRSPRSKPNGGDRVSSYLEPPSYADVIFSPFDDISEINGSEDGHSQS--SDSLSRS 115
Query: 519 XXXXXXEYLTITVSQPQKMQDTTNTSIVPGSNT 617 +Y+ ITVS PQK Q+ TN S++PG +T Sbjct: 116 PSSLSSDYIKITVSNPQKEQEATN-SMIPGGST 147
>tr|A7Q3Q2|A7Q3Q2_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029371001 PE=4 SV=1 Length = 560
Score = 55.5 bits (132), Expect = 3e-06 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 6/167 (3%) Frame = +3
Query: 135 MMGPEDESEHENANFYSSDAMESLVLD--SSPHPLISSSDYKSTMSGTLPAMEDSH---- 296 MMG E++ E + S + ME+LVLD S+ H L SD++S +S + ++H Sbjct: 1 MMGYENQGYEEAHLYASREEMETLVLDEPSNGHHL---SDHRSIVS-----LHEAHHTLS 52
Query: 297 PLSGFREEKEEDLFDDRYRNSTLKKPTSSNGQEDPLVEPPSYADVIFSPYTSRESSFSRN 476 P + ++ L +S K + N + +EPPSYADVIF+ + N Sbjct: 53 PPAAVISAVDDPLVSSSSTSSVDHK--NPNLPFNSFLEPPSYADVIFNSFD------ESN 104
Query: 477 GNVKAVGXXXXXXXXXXXXXEYLTITVSQPQKMQDTTNTSIVPGSNT 617 G+ +YL I+V++P + Q+ +N S+VPG NT Sbjct: 105 GDTNGHESPKSLPRSASSNSDYLNISVTEPHREQEMSN-SLVPGGNT 150
>tr|Q9FGH8|Q9FGH8_ARATH Similarity to sorting nexin OS=Arabidopsis thaliana PE=4 SV=1 Length = 566
Score = 55.1 bits (131), Expect = 3e-06 Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 19/160 (11%) Frame = +3
Query: 195 MESLVL--DSSPHPL--------ISSSDYKSTMSGTLPAMED--SHPLSGFREEKEEDLF 338 ME+L L D HPL S+S Y+S MS TL + D S P + + L Sbjct: 1 MENLDLGVDGGDHPLKISDVNGDTSNSGYRSAMS-TLSNVRDPLSPPPTVMIPADSDPLL 59
Query: 339 D----DRYRNSTLKKPTSSNGQEDPLVEPPSYADVIFSPY---TSRESSFSRNGNVKAVG 497 + +R+S KP SS ++ +EPPSYADVIFSP+ + E + + + ++ + Sbjct: 60 APSSYEDFRSSFSSKPISS---DNSYIEPPSYADVIFSPFDENSDSEINGTEDNSLHSQF 116
Query: 498 XXXXXXXXXXXXXEYLTITVSQPQKMQDTTNTSIVPGSNT 617 +Y+ ITVS PQK Q+ +N+ + G NT Sbjct: 117 SDSLSRSPSSSSSDYIKITVSNPQKEQEISNS--IVGGNT 154
>tr|Q7PY01|Q7PY01_ANOGA AGAP001678-PA OS=Anopheles gambiae GN=AGAP001678 PE=4 SV=4 Length = 1493
Score = 38.5 bits (88), Expect = 0.32 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = +3
Query: 228 PLISSSDYKSTMSGTLPAMEDSHPLSGFREEKEEDLFDDRYRNSTLKKPTSSNGQEDPLV 407 PL + SDY PA + + +E+E +++ +TL P S +G+E PL+ Sbjct: 698 PLTAVSDYS-------PATAAAAAAAAAAKERELLMYETSSTTTTLTPPPSESGRETPLL 750
Query: 408 EPPSYADVIFSPYTSRESSFSRNGNV 485 PSYA RE N N+ Sbjct: 751 SGPSYAAAAAGTIRERELQNINNNNL 776
>tr|Q4JSB7|Q4JSB7_ANOGA Tensin OS=Anopheles gambiae GN=D1.3 PE=4 SV=1 Length = 1494
Score = 38.5 bits (88), Expect = 0.32 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = +3
Query: 228 PLISSSDYKSTMSGTLPAMEDSHPLSGFREEKEEDLFDDRYRNSTLKKPTSSNGQEDPLV 407 PL + SDY PA + + +E+E +++ +TL P S +G+E PL+ Sbjct: 698 PLTAVSDYS-------PATAAAAAAAAAAKERELLMYETSSTTTTLTPPPSESGRETPLL 750
Query: 408 EPPSYADVIFSPYTSRESSFSRNGNV 485 PSYA RE N N+ Sbjct: 751 SGPSYAAAAAGTIRERELQNINNNNL 776
>tr|Q54HI6|Q54HI6_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0188417 PE=4 SV=1 Length = 532
Score = 36.2 bits (82), Expect = 1.6 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 9/130 (6%) Frame = +3
Query: 234 ISSSDYKSTMSGTLPAMEDSHPLSGFREEKEEDLFDDRYRNSTLKKPTSSNGQEDPL-VE 410 + S+D ++ T SHP+ ++ D DD R+S +SN Q P Sbjct: 5 VGSTDKNKSLQKT------SHPIESSNKKSSRDDSDDEVRDS-----INSNSQTTPYKPP 53
Query: 411 PPSYADVIFSPYTSRESSFSRNGNVKAVGXXXXXXXXXXXXXEYL--------TITVSQP 566 PPSY + Y + + N N+ + + T T +P Sbjct: 54 PPSYKKLFLQQYNQKSPASPINLNINKESQSIQEREPQQQQPQVISSSSSSSSTTTTPKP 113
Query: 567 QKMQDTTNTS 596 QK Q TT++S Sbjct: 114 QKQQTTTSSS 123
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