DK960415 |
Clone id |
TST39A01NGRL0007_F18 |
Library |
TST39 |
Length |
605 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_F18. 5' end sequence. |
Accession |
DK960415 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTGGATAATCTACTGACTTGTAAGTTCTCTAGGTTTGGAGTCATGGTGTTTAGTCGCAGA TCCTGCTAATCTTCCCGGCTGCGCTCGGCCATGGGTTTTTGATCGCTCACGATGCATTGC CTTGCTGATCATTGGAGCTTTGGAGCTGTGCGTCCTTTTTCTGTCAAATTAATAGGCTGC TTCAAATCTCTTCTTTCTTAGAAGCCGGATGTATTCTCCCTTTTACAGGAATGGTTTGGT TGGCACTATCTGGCACAATGAATCATCCTCACTCTGTCATGAGCTTCGCTTCACTCACAG GATCTCCTACAGGCCAGACGTTGCACCCCAGCCATTTTTCCTCGGTGTTCCCAGACTGTC CTAACGAGCCTTCGCTAGACTTGAATTTTGTGCAAAAGCTGTCACAGAATAGCCAAAAGG CACAGAATGAGTTTGAGCTAGGCCACAGCTTCCATCCTCACCACAATGAAAACAGTCCAA ACTCTCAAATGGAGATAATAGCAAAGGTTGTACCTGAGTCCGTTGTATTTAATGATGGCC AGGATAAGATGGCTATTGACAGTGTGCCTGTCAAAGCGGCACCACGGTCTCGCTGCCACT GGTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42822 |
Definition |
sp|Q42822|RBS_GLYTO Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella |
Align length |
96 |
Score (bit) |
32.0 |
E-value |
2.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6DTF9 |
Definition |
tr|B6DTF9|B6DTF9_9EUGL Putative uncharacterized protein OS=Bodo saltans |
Align length |
121 |
Score (bit) |
37.4 |
E-value |
0.68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960415|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_F18, 5' (605 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6DTF9|B6DTF9_9EUGL Putative uncharacterized protein OS=Bodo ... 37 0.68 tr|A5FCH3|A5FCH3_FLAJ1 Alpha-L-rhamnosidase OS=Flavobacterium jo... 36 1.5 tr|Q835I7|Q835I7_ENTFA NAD-dependent formate dehydrogenase, alph... 36 2.0 tr|B4N0Z3|B4N0Z3_DROWI GK24846 OS=Drosophila willistoni GN=GK248... 36 2.0 tr|Q6BMX1|Q6BMX1_DEBHA DEHA2F01958p OS=Debaryomyces hansenii GN=... 35 3.4 tr|B6QHU4|B6QHU4_PENMA WD repeat protein OS=Penicillium marneffe... 35 3.4 tr|A9RJ40|A9RJ40_PHYPA Predicted protein OS=Physcomitrella paten... 35 4.4 tr|Q6CU54|Q6CU54_KLULA KLLA0C07535p OS=Kluyveromyces lactis GN=K... 35 4.4 tr|Q5KH22|Q5KH22_CRYNE Putative uncharacterized protein OS=Crypt... 35 4.4 tr|Q55SN5|Q55SN5_CRYNE Putative uncharacterized protein OS=Crypt... 35 4.4 tr|A0N0F7|A0N0F7_9GEMI AV1 OS=Tomato leaf curl New delhi virus -... 34 5.8 tr|B6BJ44|B6BJ44_9PROT Putative uncharacterized protein OS=Campy... 34 7.6 tr|A3CSK0|A3CSK0_METMJ (NiFe) hydrogenase maturation protein Hyp... 34 7.6 tr|Q55BK7|Q55BK7_DICDI Putative uncharacterized protein OS=Dicty... 33 9.9
>tr|B6DTF9|B6DTF9_9EUGL Putative uncharacterized protein OS=Bodo saltans PE=4 SV=1 Length = 881
Score = 37.4 bits (85), Expect = 0.68 Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 7/121 (5%) Frame = +3
Query: 249 SGTMNHPHSVMSFASLTGSPTGQTLHPSHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQN 428 SG +HP ++ +S T PS S V+P N P + L Q + Q Q+ + Sbjct: 739 SGATHHPLQHVTLSSNTSDARSTLAAPSQLSRVYPSSANRPIVGLQATQMMMQQQQQQPS 798
Query: 429 EFELGHSFHPHHNENSPN-------SQMEIIAKVVPESVVFNDGQDKMAIDSVPVKAAPR 587 G + PN S + P +V Q + SVP +APR Sbjct: 799 GVGRGPNPAAAPLATLPNGFVLVGSSSSNASSFQQPHRMVSQQQQQQQQQPSVPGTSAPR 858
Query: 588 S 590 S Sbjct: 859 S 859
>tr|A5FCH3|A5FCH3_FLAJ1 Alpha-L-rhamnosidase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_4085 PE=3 SV=1 Length = 926
Score = 36.2 bits (82), Expect = 1.5 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = +3
Query: 330 SHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPNSQME--IIA 503 S+F SVF DCP L +++++ N + L +F P +N +SQ E +I Sbjct: 509 SNFQSVFTDCPQREK--LGWLEEIQLNGPSLMFNYNL-QTFLPATMQNISDSQRENGLIP 565
Query: 504 KVVPESVVF 530 +VPE V+F Sbjct: 566 TIVPEYVIF 574
>tr|Q835I7|Q835I7_ENTFA NAD-dependent formate dehydrogenase, alpha subunit OS=Enterococcus faecalis GN=fdhA PE=4 SV=1 Length = 906
Score = 35.8 bits (81), Expect = 2.0 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = -3
Query: 567 AHCQ*PSYPGHH*IQ----RTQVQPLLLSPFESLDCFHCGEDGSCGLAQTHSVPFGYSVT 400 AHCQ H + R + LLLS + L+CF CG++G C L Q +++ +G VT Sbjct: 74 AHCQEDMVVATHSEKVADSRRFILDLLLSNHK-LECFSCGKNGDCQL-QQYALDYGIDVT 131
Query: 399 AFAQNSSL 376 +F + + Sbjct: 132 SFTEGKRM 139
>tr|B4N0Z3|B4N0Z3_DROWI GK24846 OS=Drosophila willistoni GN=GK24846 PE=4 SV=1 Length = 2546
Score = 35.8 bits (81), Expect = 2.0 Identities = 24/90 (26%), Positives = 37/90 (41%) Frame = +3
Query: 336 FSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENSPNSQMEIIAKVVP 515 F PDC N ++ LN +Q+ Q Q Q + G + P H + P +M +P Sbjct: 506 FQQSAPDCFNNSNMGLNMLQQQQQQQQLRQQQQMRGLAPPPPHPQQQPQQRM----MTLP 561
Query: 516 ESVVFNDGQDKMAIDSVPVKAAPRSRCHWS 605 S GQ + + P+ A + H S Sbjct: 562 MSQASPQGQQQFIGGASPLAAHSPASSHHS 591
>tr|Q6BMX1|Q6BMX1_DEBHA DEHA2F01958p OS=Debaryomyces hansenii GN=DEHA2F01958g PE=4 SV=2 Length = 1007
Score = 35.0 bits (79), Expect = 3.4 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 21/114 (18%) Frame = +3
Query: 258 MNHPHSVMSFASLTGSP-TGQTLHPSHFSSVFPDCPNEPSLDLNF------VQKLSQNSQ 416 +++ S++ L SP QT + S + P PSL+L+ Q+LSQ Sbjct: 10 LSYSQSMLPSNLLVNSPYIQQTQNIVPMSPILPRQYAPPSLNLSHGNLAHHQQQLSQMHS 69
Query: 417 KAQNEFELGHSFHPHHNENSP-------NSQME-------IIAKVVPESVVFND 536 Q++ + HS HPH+ NSP NS +E +I K + E+V N+ Sbjct: 70 HHQHQNQQHHSQHPHYVPNSPYLTPLSSNSNLEQLNLSRTVILKNIDENVSLNE 123
>tr|B6QHU4|B6QHU4_PENMA WD repeat protein OS=Penicillium marneffei ATCC 18224 GN=PMAA_095430 PE=4 SV=1 Length = 1082
Score = 35.0 bits (79), Expect = 3.4 Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 25/143 (17%) Frame = +3
Query: 174 RLLQISSFLEAGCILPFTGMVWLALSGTMNHPHSVM------SFASLTGSPTGQTLHPSH 335 ++ +SS+ A C + T+ H H V S A+L + T TLH H Sbjct: 548 KIWDVSSYTNATCRM------------TLRHDHKVQIMARSPSIATLLATGTDSTLHLWH 595
Query: 336 FSSVFPDCPNEPSLDLNFV-QKLSQN------------------SQKAQNEFELGHSFHP 458 F SV C LDLN++ Q++++N S Q+ F G S + Sbjct: 596 FDSVSQAC-----LDLNYMEQRITRNPRAIKESDFTPSSLAWGLSTLTQDLFVAGFSGNG 650
Query: 459 HHNENSPNSQMEIIAKVVPESVV 527 HH ++ + KV S+V Sbjct: 651 HHGGDACREGLLAAWKVAQGSLV 673
>tr|A9RJ40|A9RJ40_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_66805 PE=4 SV=1 Length = 1483
Score = 34.7 bits (78), Expect = 4.4 Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 2/111 (1%) Frame = +3
Query: 261 NHPHSVMSFASLTGSPTGQTLHPSHFSSVFPDCPNEPSLDLNFVQKLSQNSQKAQNEFEL 440 +H HSV SL SPTG S + D P+ P S S ++NE E+ Sbjct: 922 SHSHSVKDEESLPSSPTG--------SVIIKDTPSPPG---------SPASNYSENESEI 964
Query: 441 GHSFHPHHNENSPNSQMEIIAKVVPESV--VFNDGQDKMAIDSVPVKAAPR 587 H F H SP V P SV D D+ A + V PR Sbjct: 965 -HEFQSHSRAKSP---------VSPRSVAHALEDDHDERAGSNTGVPQDPR 1005
>tr|Q6CU54|Q6CU54_KLULA KLLA0C07535p OS=Kluyveromyces lactis GN=KLLA0C07535g PE=4 SV=1 Length = 624
Score = 34.7 bits (78), Expect = 4.4 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3
Query: 168 FDRKRTHSSKAPMISKAMHRERSKTHGRAQPGRLAGSATKHH 43 F RK+THSS ++ E+ + HGR+ P +GS HH Sbjct: 9 FHRKKTHSSSQLSLASGATAEQERGHGRSSPS--SGSPNSHH 48
>tr|Q5KH22|Q5KH22_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNE01530 PE=4 SV=1 Length = 1393
Score = 34.7 bits (78), Expect = 4.4 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 10/97 (10%) Frame = +3
Query: 216 LPFTGMVWLALSGTMNH-----PHSVMSFASL----TGSPTGQT-LHPSHFSSVFPDCPN 365 LP G V L G N+ P S+ S+ + SP+ LHP H S+ +P + Sbjct: 444 LPGEGDVGLCQDGDTNYLIHATPTSLTSYPIIYSQHKASPSSSLQLHPGHSSAAYPSRSH 503
Query: 366 EPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENS 476 P+L+ + + + H HPH E+S Sbjct: 504 TPNLESSDASSSLLRKSVSSSRLLDPHQSHPHEKEHS 540
>tr|Q55SN5|Q55SN5_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNBE1480 PE=4 SV=1 Length = 1457
Score = 34.7 bits (78), Expect = 4.4 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 10/97 (10%) Frame = +3
Query: 216 LPFTGMVWLALSGTMNH-----PHSVMSFASL----TGSPTGQT-LHPSHFSSVFPDCPN 365 LP G V L G N+ P S+ S+ + SP+ LHP H S+ +P + Sbjct: 444 LPGEGDVGLCQDGDTNYLIHATPTSLTSYPIIYSQHKASPSSSLQLHPGHSSAAYPSRSH 503
Query: 366 EPSLDLNFVQKLSQNSQKAQNEFELGHSFHPHHNENS 476 P+L+ + + + H HPH E+S Sbjct: 504 TPNLESSDASSSLLRKSVSSSRLLDPHQSHPHEKEHS 540
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