DK960416 |
Clone id |
TST39A01NGRL0007_F19 |
Library |
TST39 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_F19. 5' end sequence. |
Accession |
DK960416 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCTCTCCCTGTTTATGGATTGGATGCCGATTTGAAGGCCAAAAGAGATGCTAACTACGA CCCAAAACTCGAAGCAGAAGCCAAACAATGGGTTGAATCTGTTACTGGAGAACACCTTGG ATCAAGTTTACATGGTGGACTCAAGAGTGGTGTTGTCTTATGCAAATTGATCAACAAACT CAAGCCAAACAAGATCGGTAAAATTGGAACTTCCAACATGCCTTTCGTACAAATGGAAAA CATCTCTGCCTATTTGAATGCTTGCAAGGATTTCGGTCTCGCCGTTCACGACTTGTTCCA AACTGTAGATTTATACGAAGAAAAGAACATGAATCAAGTCGTCATCAACTTGATTGCCCT TAAGAGAAAGAGTGGTGGTGGTGTCTCAACTGGTTCTCCTGCTCAAGTACCAGTATCTGC CCCTTCCTCATCTGGAACCAAATTCTGTGCTAACTGTGGAACTAAGCTCCCAGCCGCTGC TAAGTTCTGTGCTAGTTGTGGTTCTTCCCAATAAACAACCTTGTCGATCTTGAAATTGTT TATAAAATCCATCATAGTAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3SYU6 |
Definition |
sp|Q3SYU6|CNN2_BOVIN Calponin-2 OS=Bos taurus |
Align length |
168 |
Score (bit) |
92.0 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q54CW1 |
Definition |
tr|Q54CW1|Q54CW1_DICDI Calponin homology (CH) domain-containing protein OS=Dictyostelium discoideum |
Align length |
171 |
Score (bit) |
131.0 |
E-value |
3.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960416|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_F19, 5' (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q54CW1|Q54CW1_DICDI Calponin homology (CH) domain-containing ... 131 3e-29 tr|B6ME13|B6ME13_BRAFL Putative uncharacterized protein OS=Branc... 100 5e-20 tr|Q7ZX19|Q7ZX19_XENLA Cnn2-prov protein (Calponin 2 copy A) OS=... 95 3e-18 tr|Q6P3P3|Q6P3P3_XENTR Putative uncharacterized protein MGC76140... 95 3e-18 tr|Q5ZKU6|Q5ZKU6_CHICK H2-calponin OS=Gallus gallus GN=RCJMB04_9... 94 4e-18 tr|Q4SBM4|Q4SBM4_TETNG Chromosome 15 SCAF14667, whole genome sho... 94 5e-18 tr|B5X3R8|B5X3R8_SALSA Calponin-2 OS=Salmo salar GN=CNN2 PE=2 SV=1 94 5e-18 tr|Q6NVQ5|Q6NVQ5_XENTR Calponin 2 OS=Xenopus tropicalis GN=cnn1 ... 94 6e-18 tr|Q6GNN7|Q6GNN7_XENLA MGC80982 protein OS=Xenopus laevis GN=MGC... 94 6e-18 tr|B5X427|B5X427_SALSA Calponin-2 OS=Salmo salar GN=CNN2 PE=2 SV=1 94 6e-18 tr|A9CDP5|A9CDP5_XENLA Calponin 2 copy B OS=Xenopus laevis GN=CN... 94 6e-18 tr|O93547|O93547_XENLA Calponin H3 OS=Xenopus laevis GN=clpH3 PE... 93 8e-18 tr|B3RX68|B3RX68_TRIAD Putative uncharacterized protein OS=Trich... 92 1e-17 tr|Q6PBA5|Q6PBA5_DANRE Calponin 2 OS=Danio rerio GN=cnn2 PE=2 SV=1 92 2e-17 tr|Q4F876|Q4F876_DANRE Calponin 2 OS=Danio rerio GN=cnn2 PE=2 SV=1 92 2e-17 tr|Q6PAB2|Q6PAB2_XENLA MGC68737 protein OS=Xenopus laevis GN=MGC... 92 2e-17 tr|Q543F3|Q543F3_MOUSE Putative uncharacterized protein OS=Mus m... 92 2e-17 tr|Q6FHE4|Q6FHE4_HUMAN CNN2 protein OS=Homo sapiens GN=CNN2 PE=2... 91 3e-17 tr|Q53GK7|Q53GK7_HUMAN Calponin 2 isoform a variant (Fragment) O... 91 3e-17 tr|A5D8U8|A5D8U8_HUMAN Calponin 2 OS=Homo sapiens GN=CNN2 PE=2 SV=1 91 3e-17 tr|Q7ZYF5|Q7ZYF5_XENLA Cnn3-prov protein OS=Xenopus laevis GN=cn... 91 4e-17 tr|Q6FHA7|Q6FHA7_HUMAN CNN3 protein (Fragment) OS=Homo sapiens G... 91 4e-17 tr|A6NFI4|A6NFI4_HUMAN Calponin 2, isoform CRA_a OS=Homo sapiens... 91 5e-17 tr|B8A668|B8A668_DANRE Novel protein similar to vertebrate calpo... 90 7e-17 tr|Q6IR60|Q6IR60_XENLA MGC82320 protein OS=Xenopus laevis GN=cnn... 90 9e-17 tr|A7WQ46|A7WQ46_9DINO Calponin domain-containing protein OS=Noc... 90 9e-17 tr|Q8IU21|Q8IU21_BRABE Calponin OS=Branchiostoma belcheri GN=Amp... 89 2e-16 tr|B4DUT8|B4DUT8_HUMAN cDNA FLJ52765, highly similar to Calponin... 89 2e-16 tr|B3RX63|B3RX63_TRIAD Putative uncharacterized protein OS=Trich... 88 3e-16 tr|Q1HQ70|Q1HQ70_BOMMO Transgelin OS=Bombyx mori PE=2 SV=1 88 4e-16
>tr|Q54CW1|Q54CW1_DICDI Calponin homology (CH) domain-containing protein OS=Dictyostelium discoideum GN=DDB_0184511 PE=4 SV=1 Length = 176
Score = 131 bits (329), Expect = 3e-29 Identities = 76/171 (44%), Positives = 93/171 (54%), Gaps = 6/171 (3%) Frame = +2
Query: 14 YGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKPNK 193 +GLDADL KR A YD LE + + W+ES+ GE CKL NK+ P Sbjct: 6 FGLDADLANKRVALYDKDLENDTRSWIESLIGEKINGDLMAALKSGVILCKLGNKIAPGS 65
Query: 194 IGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIALKR-K 370 K S+ PFVQMEN++ +LN CK G+A DLF TVDLYE KN NQV+ L ALKR Sbjct: 66 C-KSSPSSAPFVQMENVNNFLNLCKKQGVATTDLFMTVDLYEGKNPNQVIQGLQALKRIT 124
Query: 371 SGGGVST-----GXXXXXXXXXXXXXGTKFCANCGTKLPAAAKFCASCGSS 508 SGGG T T FC+ CGTK + A+FC SCG++ Sbjct: 125 SGGGKPTTTAKSAPTPSTIFETTSKNTTSFCSQCGTKAVSGARFCGSCGTA 175
>tr|B6ME13|B6ME13_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_59003 PE=4 SV=1 Length = 187
Score = 100 bits (249), Expect = 5e-20 Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 1/119 (0%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXX-CKLINKLK 184 P+YGL A++ K+ A YD LE + + W+ + GE C LINKL+ Sbjct: 6 PLYGLSAEIARKQAAKYDHDLERQVRLWMGEILGEPFPDAGFQEAMKDGTLLCNLINKLE 65
Query: 185 PNKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL 361 P + KI TS +PF+QMENIS +L A + +GL DLFQTVDLYE K MN V+ L+AL Sbjct: 66 PGSVKKIKTSKVPFMQMENISQFLQAAERYGLKRTDLFQTVDLYEGKGMNAVLDCLLAL 124
>tr|Q7ZX19|Q7ZX19_XENLA Cnn2-prov protein (Calponin 2 copy A) OS=Xenopus laevis GN=CNN2 PE=2 SV=1 Length = 294
Score = 94.7 bits (234), Expect = 3e-18 Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 4/167 (2%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YGL A++K K YDP+ E E K W+E VTG C+L+NKL+P Sbjct: 9 PSYGLSAEVKNKLAQKYDPQKETELKVWIEEVTGMSIGPDFQKGLKDGVILCELMNKLRP 68
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL-- 361 I K+ S + Q+EN+S ++ A +G+ DLF+ DL+E NM QV ++L++L Sbjct: 69 RAIPKVNVSRQNWHQLENLSNFIKAMSLYGMKSVDLFEANDLFENGNMTQVQVSLLSLAG 128
Query: 362 --KRKSGGGVSTGXXXXXXXXXXXXXGTKFCANCGTKLPAAAKFCAS 496 K + V G TK NC L CAS Sbjct: 129 LAKTQGLQSVDIGVKYSEKKERNFDDNTKKAGNCVIGLQMGTNKCAS 175
>tr|Q6P3P3|Q6P3P3_XENTR Putative uncharacterized protein MGC76140 OS=Xenopus tropicalis GN=cnn3 PE=2 SV=1 Length = 331
Score = 94.7 bits (234), Expect = 3e-18 Identities = 45/118 (38%), Positives = 68/118 (57%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YGL A++K K YDP++E E + W+E VTG C LINKL+P Sbjct: 8 PAYGLSAEVKNKIAQKYDPQVEEELRLWIEEVTGMIIGENFQQGLRDGIILCNLINKLQP 67
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL 361 I KI + + + ++ENI ++ A +D+G+ HD+F+ DL+E NM QV +L++L Sbjct: 68 GSIKKINEAKLNWHKLENIGNFIKAMQDYGMKPHDIFEANDLFENGNMTQVQTSLVSL 125
>tr|Q5ZKU6|Q5ZKU6_CHICK H2-calponin OS=Gallus gallus GN=RCJMB04_9b22 PE=2 SV=1 Length = 305
Score = 94.4 bits (233), Expect = 4e-18 Identities = 46/118 (38%), Positives = 70/118 (59%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YGL A++K + YDP+ EAE + W+ESVTG C+L+NKL+P Sbjct: 10 PSYGLSAEVKNRLAQKYDPQKEAELRTWIESVTGRQIGADFQKGLKDGVILCELMNKLQP 69
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL 361 N + KI S + + Q+EN+S ++ A +G+ DLF+ DL+E N+ QV ++L+AL Sbjct: 70 NSVRKINRSALNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNLTQVQVSLLAL 127
>tr|Q4SBM4|Q4SBM4_TETNG Chromosome 15 SCAF14667, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00020905001 PE=4 SV=1 Length = 334
Score = 94.0 bits (232), Expect = 5e-18 Identities = 46/129 (35%), Positives = 69/129 (53%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YGL A++K+K YDP+ E E + W++ +TG C+LIN L P Sbjct: 7 PAYGLSAEVKSKIAQKYDPQKEEELRLWIQDITGHPIGPDFQKEMKNGVILCELINHLAP 66
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIALKR 367 + KI TS + + Q+EN++ ++ A +GL HD+F+ DL+E NM QV L+AL Sbjct: 67 GSVKKINTSPLNWHQLENLTNFIKALTAYGLKPHDIFEATDLFENGNMTQVQTTLLALAS 126
Query: 368 KSGGGVSTG 394 G + G Sbjct: 127 MVGFTANPG 135
>tr|B5X3R8|B5X3R8_SALSA Calponin-2 OS=Salmo salar GN=CNN2 PE=2 SV=1 Length = 318
Score = 94.0 bits (232), Expect = 5e-18 Identities = 46/118 (38%), Positives = 67/118 (56%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YG A++K+K YDP+ E E K W+E TG CKLINKL+P Sbjct: 10 PAYGFSAEVKSKIAGKYDPQREEELKVWIEDTTGCDIGEDFQKGLKNGVILCKLINKLQP 69
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL 361 + KI +S M + Q+ENI+ ++ + + +GL HD+F+ DL+E NM QV L++L Sbjct: 70 GSVKKINSSTMNWHQLENITNFIKSIQMYGLKPHDIFEANDLFESGNMTQVQSTLLSL 127
>tr|Q6NVQ5|Q6NVQ5_XENTR Calponin 2 OS=Xenopus tropicalis GN=cnn1 PE=2 SV=1 Length = 295
Score = 93.6 bits (231), Expect = 6e-18 Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 5/168 (2%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YGL A+++ K YDP+ E E K W+E VTG C+L+NKL+P Sbjct: 9 PAYGLSAEVRNKLAQKYDPQKETELKVWIEEVTGMSIGPDFQKGLKDGVILCELMNKLRP 68
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL-- 361 + I K+ S + Q+EN+S ++ A +G+ DLF+ DL+E NM QV ++L+AL Sbjct: 69 HSIPKVNVSRQNWHQLENLSNFIKAMNLYGMKSVDLFEANDLFENGNMTQVQVSLLALAG 128
Query: 362 ---KRKSGGGVSTGXXXXXXXXXXXXXGTKFCANCGTKLPAAAKFCAS 496 R V G TK +C L CAS Sbjct: 129 LAKSRGMQSEVDIGVKYSEKQERNFDDNTKKAGHCVIGLQMGTNKCAS 176
>tr|Q6GNN7|Q6GNN7_XENLA MGC80982 protein OS=Xenopus laevis GN=MGC80982 PE=2 SV=1 Length = 295
Score = 93.6 bits (231), Expect = 6e-18 Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 5/168 (2%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YGL A++K K YDP+ E E K W+E VTG C+L+NKL+P Sbjct: 9 PAYGLSAEVKNKLAQKYDPQKETELKVWIEEVTGMSIGPDFQKGLKDGIILCELMNKLRP 68
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIALK- 364 N I K+ S + Q+EN+S ++ +G+ DLF+ DL+E NM QV ++L+AL Sbjct: 69 NSIPKVNVSRQNWHQLENLSNFIKTMALYGMKSVDLFEANDLFENGNMTQVQVSLLALAG 128
Query: 365 -RKSGG---GVSTGXXXXXXXXXXXXXGTKFCANCGTKLPAAAKFCAS 496 K+ G V G TK +C L CAS Sbjct: 129 LAKTQGLQSEVDIGVKYSEKKERSFDENTKKAGHCVIGLQMGTNKCAS 176
>tr|B5X427|B5X427_SALSA Calponin-2 OS=Salmo salar GN=CNN2 PE=2 SV=1 Length = 315
Score = 93.6 bits (231), Expect = 6e-18 Identities = 45/118 (38%), Positives = 68/118 (57%) Frame = +2
Query: 8 PVYGLDADLKAKRDANYDPKLEAEAKQWVESVTGEXXXXXXXXXXXXXXXXCKLINKLKP 187 P YG A++K+K YDP+ E E + W+E VTG C+LINKL+P Sbjct: 10 PAYGFSAEVKSKIAGKYDPQREEELRVWIEDVTGCVIGEDFQKGLKNGVILCELINKLQP 69
Query: 188 NKIGKIGTSNMPFVQMENISAYLNACKDFGLAVHDLFQTVDLYEEKNMNQVVINLIAL 361 + KI +S M + Q+ENI+ ++ + + +GL HD+F+ DL+E NM QV L++L Sbjct: 70 GSVKKINSSTMNWHQLENITNFIKSIQTYGLKPHDIFEANDLFESGNMTQVQSTLLSL 127
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